RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 DAZAP1Q96EP5 407 aaKnown RBP9.66□□□□□ -0.86
FANCA-220ENST00000566409 SMIM12Q96EX1 92 aa9.66□□□□□ -0.86
FANCA-220ENST00000566409 VAX2Q9UIW0 290 aa9.66□□□□□ -0.86
FANCA-220ENST00000566409 URGCP-MRPS24S4R325 110 aa9.66□□□□□ -0.86
FANCA-220ENST00000566409 hCG_2014768A0A024R1R8 64 aa9.65□□□□□ -0.86
FANCA-220ENST00000566409 A0A087WX48 190 aa9.65□□□□□ -0.86
FANCA-220ENST00000566409 IFNA1P01562 189 aa9.65□□□□□ -0.86
FANCA-220ENST00000566409 SMR3BP02814 79 aaPredicted RBP9.65□□□□□ -0.86
FANCA-220ENST00000566409 AKAP14Q86UN6 197 aa9.65□□□□□ -0.86
FANCA-220ENST00000566409 AP1S3Q96PC3 154 aa9.65□□□□□ -0.86
FANCA-220ENST00000566409 CHCHD7Q9BUK0 85 aa9.65□□□□□ -0.86
FANCA-220ENST00000566409 TPPP3Q9BW30 176 aa9.65□□□□□ -0.86
FANCA-220ENST00000566409 FLG2Q5D862 2391 aaPredicted RBP9.64□□□□□ -0.87
FANCA-220ENST00000566409 M0QY20 66 aa9.64□□□□□ -0.87
FANCA-220ENST00000566409 RPS20P60866 119 aaKnown RBP9.64□□□□□ -0.87
FANCA-220ENST00000566409 MPV17L2Q567V2 206 aa9.64□□□□□ -0.87
FANCA-220ENST00000566409 ATRAIDQ6UW56 229 aa9.64□□□□□ -0.87
FANCA-220ENST00000566409 ENHOQ6UWT2 76 aa9.64□□□□□ -0.87
FANCA-220ENST00000566409 UBE2WQ96B02 151 aa9.64□□□□□ -0.87
FANCA-220ENST00000566409 TMEM70Q9BUB7 260 aa9.64□□□□□ -0.87
FANCA-220ENST00000566409 IGKV2D-24A0A075B6R9 120 aa9.63□□□□□ -0.87
FANCA-220ENST00000566409 TMEM262E9PQX1 116 aa9.63□□□□□ -0.87
FANCA-220ENST00000566409 P01737 135 aa9.63□□□□□ -0.87
FANCA-220ENST00000566409 SMIM17P0DL12 118 aa9.63□□□□□ -0.87
FANCA-220ENST00000566409 Q5VSD8 79 aa9.63□□□□□ -0.87
FANCA-220ENST00000566409 LYZL1Q6UWQ5 148 aa9.63□□□□□ -0.87
FANCA-220ENST00000566409 NUDT10Q8NFP7 164 aa9.63□□□□□ -0.87
FANCA-220ENST00000566409 NUDT11Q96G61 164 aa9.63□□□□□ -0.87
FANCA-220ENST00000566409 COX11Q9Y6N1 276 aa9.63□□□□□ -0.87
FANCA-220ENST00000566409 MYCBP2O75592 4640 aa9.63□□□□□ -0.87
FANCA-220ENST00000566409 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.62□□□□□ -0.87
FANCA-220ENST00000566409 K7EN84 100 aa9.62□□□□□ -0.87
FANCA-220ENST00000566409 CACNG7P62955 275 aa9.62□□□□□ -0.87
FANCA-220ENST00000566409 ELOBQ15370 118 aa9.62□□□□□ -0.87
FANCA-220ENST00000566409 ALKAL2Q6UX46 152 aa9.62□□□□□ -0.87
FANCA-220ENST00000566409 Q8N976 141 aa9.62□□□□□ -0.87
FANCA-220ENST00000566409 OCC1Q8TAD7 63 aa9.62□□□□□ -0.87
FANCA-220ENST00000566409 RMI2Q96E14 147 aa9.62□□□□□ -0.87
FANCA-220ENST00000566409 DMBT1Q9UGM3 2413 aaPredicted RBP9.62□□□□□ -0.87
FANCA-220ENST00000566409 F2Z2F3 143 aa9.61□□□□□ -0.87
FANCA-220ENST00000566409 MGPP08493 103 aa9.61□□□□□ -0.87
FANCA-220ENST00000566409 LINC01620Q4KN68 170 aa9.61□□□□□ -0.87
FANCA-220ENST00000566409 SUMO4Q6EEV6 95 aa9.61□□□□□ -0.87
FANCA-220ENST00000566409 C15orf54Q8N8G6 183 aa9.61□□□□□ -0.87
FANCA-220ENST00000566409 LYPD6BQ8NI32 183 aa9.61□□□□□ -0.87
FANCA-220ENST00000566409 CHCHD5Q9BSY4 110 aa9.61□□□□□ -0.87
FANCA-220ENST00000566409 RNASE7Q9H1E1 156 aaKnown RBP9.61□□□□□ -0.87
FANCA-220ENST00000566409 NTF3P20783 257 aa9.6□□□□□ -0.87
FANCA-220ENST00000566409 TAGLN2P37802 199 aaKnown RBP9.6□□□□□ -0.87
FANCA-220ENST00000566409 KCNIP4Q6PIL6 250 aa9.6□□□□□ -0.87
FANCA-220ENST00000566409 Q6ZSA8 131 aa9.6□□□□□ -0.87
FANCA-220ENST00000566409 BIN3Q9NQY0 253 aa9.6□□□□□ -0.87
FANCA-220ENST00000566409 XKRY2A2RUG3 117 aa9.59□□□□□ -0.87
FANCA-220ENST00000566409 CTRLP40313 264 aa9.59□□□□□ -0.87
FANCA-220ENST00000566409 Q0VG73 95 aa9.59□□□□□ -0.87
FANCA-220ENST00000566409 FRZBQ92765 325 aa9.59□□□□□ -0.87
FANCA-220ENST00000566409 CNFNQ9BYD5 112 aa9.59□□□□□ -0.87
FANCA-220ENST00000566409 HERC1Q15751 4861 aa9.58□□□□□ -0.88
FANCA-220ENST00000566409 ANGP03950 147 aaKnown RBP9.58□□□□□ -0.88
FANCA-220ENST00000566409 INAFM2P0DMQ5 153 aa9.58□□□□□ -0.88
FANCA-220ENST00000566409 RBX1P62877 108 aa9.58□□□□□ -0.88
FANCA-220ENST00000566409 BLOC1S1P78537 153 aa9.58□□□□□ -0.88
FANCA-220ENST00000566409 GAGE6Q13070 117 aa9.58□□□□□ -0.88
FANCA-220ENST00000566409 IQCJQ1A5X6 159 aa9.58□□□□□ -0.88
FANCA-220ENST00000566409 TMEM97Q5BJF2 176 aa9.58□□□□□ -0.88
FANCA-220ENST00000566409 WDR73Q6P4I2 378 aa9.58□□□□□ -0.88
FANCA-220ENST00000566409 GTSF1Q8WW33 167 aa9.58□□□□□ -0.88
FANCA-220ENST00000566409 RPP21Q9H633 154 aaKnown RBP9.58□□□□□ -0.88
FANCA-220ENST00000566409 A0A1B0GVG6 124 aa9.57□□□□□ -0.88
FANCA-220ENST00000566409 H7C1H1 209 aa9.57□□□□□ -0.88
FANCA-220ENST00000566409 NKX2-5P52952 324 aaPredicted RBP9.57□□□□□ -0.88
FANCA-220ENST00000566409 KRTAP26-1Q6PEX3 210 aa9.57□□□□□ -0.88
FANCA-220ENST00000566409 RASL11AQ6T310 242 aa9.57□□□□□ -0.88
FANCA-220ENST00000566409 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.57□□□□□ -0.88
FANCA-220ENST00000566409 C1orf43Q9BWL3 253 aa9.57□□□□□ -0.88
FANCA-220ENST00000566409 DPH3P1Q9H4G8 78 aa9.57□□□□□ -0.88
FANCA-220ENST00000566409 PRR34Q9NV39 138 aa9.57□□□□□ -0.88
FANCA-220ENST00000566409 TRBV25-1A0A075B6N4 114 aa9.56□□□□□ -0.88
FANCA-220ENST00000566409 TMEM250H0YL14 139 aa9.56□□□□□ -0.88
FANCA-220ENST00000566409 TRGC1P0CF51 173 aa9.56□□□□□ -0.88
FANCA-220ENST00000566409 DEFB104AQ8WTQ1 72 aa9.56□□□□□ -0.88
FANCA-220ENST00000566409 NIT2Q9NQR4 276 aa9.56□□□□□ -0.88
FANCA-220ENST00000566409 IGHV1-24A0A0C4DH33 117 aa9.55□□□□□ -0.88
FANCA-220ENST00000566409 CRPP02741 224 aa9.55□□□□□ -0.88
FANCA-220ENST00000566409 FOXA3P55318 350 aaPredicted RBP9.55□□□□□ -0.88
FANCA-220ENST00000566409 PKIAP61925 76 aa9.55□□□□□ -0.88
FANCA-220ENST00000566409 TWIST1Q15672 202 aa9.55□□□□□ -0.88
FANCA-220ENST00000566409 CLPSL2Q6UWE3 100 aa9.55□□□□□ -0.88
FANCA-220ENST00000566409 LINC00269Q8N2A0 174 aa9.55□□□□□ -0.88
FANCA-220ENST00000566409 FAM229AH3BQW9 127 aa9.54□□□□□ -0.88
FANCA-220ENST00000566409 MIAQ16674 131 aa9.54□□□□□ -0.88
FANCA-220ENST00000566409 GATD1Q8NB37 220 aa9.54□□□□□ -0.88
FANCA-220ENST00000566409 C20orf203Q8NBC4 194 aa9.54□□□□□ -0.88
FANCA-220ENST00000566409 TRAV26-2A0A0B4J265 109 aa9.53□□□□□ -0.88
FANCA-220ENST00000566409 USP17L23D6RBM5 183 aa9.53□□□□□ -0.88
FANCA-220ENST00000566409 FAM231DQ6ZW35 169 aa9.53□□□□□ -0.88
FANCA-220ENST00000566409 GFRA4Q9GZZ7 299 aa9.53□□□□□ -0.88
FANCA-220ENST00000566409 IGLV4-60A0A075B6I1 120 aa9.52□□□□□ -0.89
FANCA-220ENST00000566409 HLA-DQA1P01909 254 aa9.52□□□□□ -0.89
FANCA-220ENST00000566409 CEBPGP53567 150 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms