RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 OR10P1Q8NGE3 313 aa0.67□□□□□ -2.3
SMG1-212ENST00000566328 OR10G4Q8NGN3 311 aa0.67□□□□□ -2.3
SMG1-212ENST00000566328 ZNRF2Q8NHG8 242 aa0.67□□□□□ -2.3
SMG1-212ENST00000566328 C15orf40Q8WUR7 153 aa0.67□□□□□ -2.3
SMG1-212ENST00000566328 MITD1Q8WV92 249 aa0.67□□□□□ -2.3
SMG1-212ENST00000566328 PPP1R1CQ8WVI7 109 aa0.67□□□□□ -2.3
SMG1-212ENST00000566328 BAALCQ8WXS3 180 aa0.67□□□□□ -2.3
SMG1-212ENST00000566328 BORCS5Q969J3 196 aa0.67□□□□□ -2.3
SMG1-212ENST00000566328 NARS2Q96I59 477 aaKnown RBP0.67□□□□□ -2.3
SMG1-212ENST00000566328 PGLYRP4Q96LB8 373 aa0.67□□□□□ -2.3
SMG1-212ENST00000566328 FAM19A4Q96LR4 140 aa0.67□□□□□ -2.3
SMG1-212ENST00000566328 C2orf50Q96LR7 162 aa0.67□□□□□ -2.3
SMG1-212ENST00000566328 IGF2BP2-AS1Q96M15 143 aa0.67□□□□□ -2.3
SMG1-212ENST00000566328 SCGB3A2Q96PL1 93 aa0.67□□□□□ -2.3
SMG1-212ENST00000566328 CIB3Q96Q77 187 aaPredicted RBP0.67□□□□□ -2.3
SMG1-212ENST00000566328 SLC25A21Q9BQT8 299 aaPredicted RBP0.67□□□□□ -2.3
SMG1-212ENST00000566328 SPXQ9BT56 116 aa0.67□□□□□ -2.3
SMG1-212ENST00000566328 TMEM147Q9BVK8 224 aa0.67□□□□□ -2.3
SMG1-212ENST00000566328 NPCDR1Q9BY65 106 aa0.67□□□□□ -2.3
SMG1-212ENST00000566328 NMES1Q9C002 83 aa0.67□□□□□ -2.3
SMG1-212ENST00000566328 SH3BGRL3Q9H299 93 aa0.67□□□□□ -2.3
SMG1-212ENST00000566328 OR51M1Q9H341 326 aa0.67□□□□□ -2.3
SMG1-212ENST00000566328 SLC39A9Q9NUM3 307 aa0.67□□□□□ -2.3
SMG1-212ENST00000566328 RABL2AQ9UBK7 228 aaPredicted RBP0.67□□□□□ -2.3
SMG1-212ENST00000566328 HHLA3Q9XRX5 114 aa0.67□□□□□ -2.3
SMG1-212ENST00000566328 TP53TG1Q9Y2A0 90 aa0.67□□□□□ -2.3
SMG1-212ENST00000566328 GOLT1BQ9Y3E0 138 aa0.67□□□□□ -2.3
SMG1-212ENST00000566328 TIMM9Q9Y5J7 89 aa0.67□□□□□ -2.3
SMG1-212ENST00000566328 ALG5Q9Y673 324 aa0.67□□□□□ -2.3
SMG1-212ENST00000566328 PXMP4Q9Y6I8 212 aa0.67□□□□□ -2.3
SMG1-212ENST00000566328 DMBT1Q9UGM3 2413 aaPredicted RBP0.66□□□□□ -2.3
SMG1-212ENST00000566328 A0A087WTM6 91 aa0.66□□□□□ -2.3
SMG1-212ENST00000566328 TRAV2A0A0B4J234 112 aa0.66□□□□□ -2.3
SMG1-212ENST00000566328 TRGV4A0A0C4DH28 118 aa0.66□□□□□ -2.3
SMG1-212ENST00000566328 A0A1B0GVG6 124 aa0.66□□□□□ -2.3
SMG1-212ENST00000566328 C7orf71A4D174 169 aa0.66□□□□□ -2.3
SMG1-212ENST00000566328 RAB19A4D1S5 217 aa0.66□□□□□ -2.3
SMG1-212ENST00000566328 RBFOX3A6NFN3 312 aa0.66□□□□□ -2.3
SMG1-212ENST00000566328 SMIM9A6NGZ8 99 aa0.66□□□□□ -2.3
SMG1-212ENST00000566328 CENPXA8MT69 81 aa0.66□□□□□ -2.3
SMG1-212ENST00000566328 A8MTW9 85 aa0.66□□□□□ -2.3
SMG1-212ENST00000566328 G3V3Q6 166 aa0.66□□□□□ -2.3
SMG1-212ENST00000566328 TEX46H3BTG2 121 aa0.66□□□□□ -2.3
SMG1-212ENST00000566328 BOLA2-SMG1P6H3BVE0 249 aa0.66□□□□□ -2.3
SMG1-212ENST00000566328 H7BYZ3 331 aa0.66□□□□□ -2.3
SMG1-212ENST00000566328 M0R036 132 aa0.66□□□□□ -2.3
SMG1-212ENST00000566328 SSNA1O43805 119 aa0.66□□□□□ -2.3
SMG1-212ENST00000566328 OR7C2O60412 319 aa0.66□□□□□ -2.3
SMG1-212ENST00000566328 SPINK4O60575 86 aa0.66□□□□□ -2.3
SMG1-212ENST00000566328 NOL3O60936 208 aaKnown RBP0.66□□□□□ -2.3
SMG1-212ENST00000566328 MPDU1O75352 247 aa0.66□□□□□ -2.3
SMG1-212ENST00000566328 UPK1BO75841 260 aa0.66□□□□□ -2.3
SMG1-212ENST00000566328 MPC2O95563 127 aa0.66□□□□□ -2.3
SMG1-212ENST00000566328 GCGP01275 180 aa0.66□□□□□ -2.3
SMG1-212ENST00000566328 IGLV2-8P01709 118 aa0.66□□□□□ -2.3
SMG1-212ENST00000566328 RLN2P04090 185 aa0.66□□□□□ -2.3
SMG1-212ENST00000566328 SLC25A5P05141 298 aaKnown RBP0.66□□□□□ -2.3
SMG1-212ENST00000566328 ATP5G1P05496 136 aa0.66□□□□□ -2.3
SMG1-212ENST00000566328 HIST1H1EP10412 219 aaKnown RBP0.66□□□□□ -2.3
SMG1-212ENST00000566328 RNASE3P12724 160 aaKnown RBP0.66□□□□□ -2.3
SMG1-212ENST00000566328 RPL7P18124 248 aaKnown RBP0.66□□□□□ -2.3
SMG1-212ENST00000566328 CXCL2P19875 107 aa0.66□□□□□ -2.3
SMG1-212ENST00000566328 M6PRP20645 277 aa0.66□□□□□ -2.3
SMG1-212ENST00000566328 ATP6V0CP27449 155 aa0.66□□□□□ -2.3
SMG1-212ENST00000566328 S100A11P31949 105 aa0.66□□□□□ -2.3
SMG1-212ENST00000566328 FAUP35544 74 aaKnown RBP0.66□□□□□ -2.3
SMG1-212ENST00000566328 RANBP1P43487 201 aa0.66□□□□□ -2.3
SMG1-212ENST00000566328 CDKN1BP46527 198 aa0.66□□□□□ -2.3
SMG1-212ENST00000566328 ATP5G3P48201 142 aa0.66□□□□□ -2.3
SMG1-212ENST00000566328 SULT1A1P50225 295 aa0.66□□□□□ -2.3
SMG1-212ENST00000566328 ZNF138P52744 262 aa0.66□□□□□ -2.3
SMG1-212ENST00000566328 CRYBA4P53673 196 aa0.66□□□□□ -2.3
SMG1-212ENST00000566328 CCL18P55774 89 aa0.66□□□□□ -2.3
SMG1-212ENST00000566328 ATP5IP56385 69 aaPredicted RBP0.66□□□□□ -2.3
SMG1-212ENST00000566328 TAS2R60P59551 318 aa0.66□□□□□ -2.3
SMG1-212ENST00000566328 AP3S2P59780 193 aa0.66□□□□□ -2.3
SMG1-212ENST00000566328 PLP1P60201 277 aa0.66□□□□□ -2.3
SMG1-212ENST00000566328 MRPS10P82664 201 aaKnown RBP0.66□□□□□ -2.3
SMG1-212ENST00000566328 RPL19P84098 196 aaKnown RBP0.66□□□□□ -2.3
SMG1-212ENST00000566328 ZNF726P1Q15940 193 aa0.66□□□□□ -2.3
SMG1-212ENST00000566328 LGALS9BQ3B8N2 356 aa0.66□□□□□ -2.3
SMG1-212ENST00000566328 LGALSLQ3ZCW2 172 aaPredicted RBP0.66□□□□□ -2.3
SMG1-212ENST00000566328 RPL7L1Q6DKI1 246 aaKnown RBP0.66□□□□□ -2.3
SMG1-212ENST00000566328 Q6ZRN7 208 aaPredicted RBP0.66□□□□□ -2.3
SMG1-212ENST00000566328 GOLT1AQ6ZVE7 132 aa0.66□□□□□ -2.3
SMG1-212ENST00000566328 DAZ4Q86SG3 579 aaKnown RBP0.66□□□□□ -2.3
SMG1-212ENST00000566328 ZNF546Q86UE3 836 aa0.66□□□□□ -2.3
SMG1-212ENST00000566328 BPIFA4PQ86YQ2 179 aa0.66□□□□□ -2.3
SMG1-212ENST00000566328 IQCF2Q8IXL9 164 aa0.66□□□□□ -2.3
SMG1-212ENST00000566328 C15orf54Q8N8G6 183 aa0.66□□□□□ -2.3
SMG1-212ENST00000566328 SLC25A29Q8N8R3 303 aa0.66□□□□□ -2.3
SMG1-212ENST00000566328 HSD17B11Q8NBQ5 300 aa0.66□□□□□ -2.3
SMG1-212ENST00000566328 INO80EQ8NBZ0 244 aaPredicted RBP0.66□□□□□ -2.3
SMG1-212ENST00000566328 OR4C5Q8NGB2 326 aa0.66□□□□□ -2.3
SMG1-212ENST00000566328 OR10G9Q8NGN4 311 aa0.66□□□□□ -2.3
SMG1-212ENST00000566328 OR1L4Q8NGR5 311 aa0.66□□□□□ -2.3
SMG1-212ENST00000566328 OR10J6PQ8NGY7 276 aa0.66□□□□□ -2.3
SMG1-212ENST00000566328 ENKURQ8TC29 256 aa0.66□□□□□ -2.3
SMG1-212ENST00000566328 SCGB1C1Q8TD33 95 aa0.66□□□□□ -2.3
SMG1-212ENST00000566328 RXFP4Q8TDU9 374 aa0.66□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms