RNA–Protein interactions for RNA: ENST00000565788.1

MAP1LC3B-207, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2 BASIC

Gene MAP1LC3B, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-207ENST00000565788 RBFOX3A6NFN3 312 aa11.42□□□□□ -0.58
MAP1LC3B-207ENST00000565788 F5H697 171 aa11.42□□□□□ -0.58
MAP1LC3B-207ENST00000565788 MPV17L2Q567V2 206 aa11.42□□□□□ -0.58
MAP1LC3B-207ENST00000565788 KIF25-AS1Q9Y6Z4 181 aa11.42□□□□□ -0.58
MAP1LC3B-207ENST00000565788 GZMBP10144 247 aa11.41□□□□□ -0.58
MAP1LC3B-207ENST00000565788 Q0VG73 95 aa11.41□□□□□ -0.58
MAP1LC3B-207ENST00000565788 CENPWQ5EE01 88 aa11.41□□□□□ -0.58
MAP1LC3B-207ENST00000565788 ENHOQ6UWT2 76 aa11.41□□□□□ -0.58
MAP1LC3B-207ENST00000565788 C15orf54Q8N8G6 183 aa11.41□□□□□ -0.58
MAP1LC3B-207ENST00000565788 AP1S3Q96PC3 154 aa11.41□□□□□ -0.58
MAP1LC3B-207ENST00000565788 TRAV1-1A0A0B4J248 108 aa11.4□□□□□ -0.58
MAP1LC3B-207ENST00000565788 IGLV2-8P01709 118 aa11.4□□□□□ -0.58
MAP1LC3B-207ENST00000565788 NTM-AS1Q6ZSK4 140 aa11.4□□□□□ -0.58
MAP1LC3B-207ENST00000565788 CHCHD5Q9BSY4 110 aa11.4□□□□□ -0.58
MAP1LC3B-207ENST00000565788 C1orf43Q9BWL3 253 aa11.4□□□□□ -0.58
MAP1LC3B-207ENST00000565788 CRPP02741 224 aa11.39□□□□□ -0.59
MAP1LC3B-207ENST00000565788 ANGP03950 147 aaKnown RBP11.39□□□□□ -0.59
MAP1LC3B-207ENST00000565788 IGLC6P0CF74 106 aa11.39□□□□□ -0.59
MAP1LC3B-207ENST00000565788 SMIM17P0DL12 118 aa11.39□□□□□ -0.59
MAP1LC3B-207ENST00000565788 RAB5CP51148 216 aa11.39□□□□□ -0.59
MAP1LC3B-207ENST00000565788 LINC00528Q8N1L1 170 aa11.39□□□□□ -0.59
MAP1LC3B-207ENST00000565788 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.39□□□□□ -0.59
MAP1LC3B-207ENST00000565788 TPPP3Q9BW30 176 aa11.39□□□□□ -0.59
MAP1LC3B-207ENST00000565788 VAX2Q9UIW0 290 aa11.39□□□□□ -0.59
MAP1LC3B-207ENST00000565788 RAB19A4D1S5 217 aa11.38□□□□□ -0.59
MAP1LC3B-207ENST00000565788 C19orf71A6NCJ1 209 aa11.38□□□□□ -0.59
MAP1LC3B-207ENST00000565788 SCXQ7RTU7 201 aa11.38□□□□□ -0.59
MAP1LC3B-207ENST00000565788 OR2D3Q8NGH3 330 aa11.38□□□□□ -0.59
MAP1LC3B-207ENST00000565788 MGPP08493 103 aa11.37□□□□□ -0.59
MAP1LC3B-207ENST00000565788 SULT1A2P50226 295 aa11.37□□□□□ -0.59
MAP1LC3B-207ENST00000565788 FER1L6-AS1Q8NA97 138 aa11.37□□□□□ -0.59
MAP1LC3B-207ENST00000565788 DAZAP1Q96EP5 407 aaKnown RBP11.37□□□□□ -0.59
MAP1LC3B-207ENST00000565788 TEX46H3BTG2 121 aa11.36□□□□□ -0.59
MAP1LC3B-207ENST00000565788 PLA2G1BP04054 148 aaKnown RBP11.36□□□□□ -0.59
MAP1LC3B-207ENST00000565788 GNG4P50150 75 aa11.36□□□□□ -0.59
MAP1LC3B-207ENST00000565788 RPS20P60866 119 aaKnown RBP11.36□□□□□ -0.59
MAP1LC3B-207ENST00000565788 PKIAP61925 76 aa11.36□□□□□ -0.59
MAP1LC3B-207ENST00000565788 MEF2BQ02080 365 aaPredicted RBP11.36□□□□□ -0.59
MAP1LC3B-207ENST00000565788 TMEM97Q5BJF2 176 aa11.36□□□□□ -0.59
MAP1LC3B-207ENST00000565788 EIF5AL1Q6IS14 154 aaKnown RBP11.36□□□□□ -0.59
MAP1LC3B-207ENST00000565788 GAGE6Q13070 117 aa11.35□□□□□ -0.59
MAP1LC3B-207ENST00000565788 C14orf177Q52M58 125 aa11.35□□□□□ -0.59
MAP1LC3B-207ENST00000565788 SUMO4Q6EEV6 95 aa11.35□□□□□ -0.59
MAP1LC3B-207ENST00000565788 SMIM12Q96EX1 92 aa11.35□□□□□ -0.59
MAP1LC3B-207ENST00000565788 TRBV20OR9-2A0A075B6H5 130 aa11.34□□□□□ -0.59
MAP1LC3B-207ENST00000565788 TRBV25-1A0A075B6N4 114 aa11.34□□□□□ -0.59
MAP1LC3B-207ENST00000565788 M0QY20 66 aa11.34□□□□□ -0.59
MAP1LC3B-207ENST00000565788 PDE6DO43924 150 aa11.34□□□□□ -0.59
MAP1LC3B-207ENST00000565788 HLA-DQA1P01909 254 aa11.34□□□□□ -0.59
MAP1LC3B-207ENST00000565788 RBX1P62877 108 aa11.34□□□□□ -0.59
MAP1LC3B-207ENST00000565788 CACNG7P62955 275 aa11.34□□□□□ -0.59
MAP1LC3B-207ENST00000565788 MIAQ16674 131 aa11.34□□□□□ -0.59
MAP1LC3B-207ENST00000565788 CLPSL2Q6UWE3 100 aa11.34□□□□□ -0.59
MAP1LC3B-207ENST00000565788 CHAC1Q9BUX1 264 aa11.34□□□□□ -0.59
MAP1LC3B-207ENST00000565788 MED9Q9NWA0 146 aa11.34□□□□□ -0.59
MAP1LC3B-207ENST00000565788 USP17L23D6RBM5 183 aa11.33□□□□□ -0.6
MAP1LC3B-207ENST00000565788 IFNA1P01562 189 aa11.33□□□□□ -0.6
MAP1LC3B-207ENST00000565788 P01737 135 aa11.33□□□□□ -0.6
MAP1LC3B-207ENST00000565788 BCL2P10415 239 aa11.33□□□□□ -0.6
MAP1LC3B-207ENST00000565788 TCTE3Q8IZS6 198 aa11.33□□□□□ -0.6
MAP1LC3B-207ENST00000565788 PRR34Q9NV39 138 aa11.33□□□□□ -0.6
MAP1LC3B-207ENST00000565788 IQCJQ1A5X6 159 aa11.32□□□□□ -0.6
MAP1LC3B-207ENST00000565788 CIRBP-AS1Q8TBR5 109 aa11.32□□□□□ -0.6
MAP1LC3B-207ENST00000565788 IGHV1-24A0A0C4DH33 117 aa11.31□□□□□ -0.6
MAP1LC3B-207ENST00000565788 XKRY2A2RUG3 117 aa11.31□□□□□ -0.6
MAP1LC3B-207ENST00000565788 H7C1H1 209 aa11.31□□□□□ -0.6
MAP1LC3B-207ENST00000565788 NKX2-5P52952 324 aaPredicted RBP11.31□□□□□ -0.6
MAP1LC3B-207ENST00000565788 KRTAP26-1Q6PEX3 210 aa11.31□□□□□ -0.6
MAP1LC3B-207ENST00000565788 LYZL1Q6UWQ5 148 aa11.31□□□□□ -0.6
MAP1LC3B-207ENST00000565788 SLC51BQ86UW2 128 aa11.31□□□□□ -0.6
MAP1LC3B-207ENST00000565788 LINC00269Q8N2A0 174 aa11.31□□□□□ -0.6
MAP1LC3B-207ENST00000565788 F2Z2F3 143 aa11.3□□□□□ -0.6
MAP1LC3B-207ENST00000565788 RASL11AQ6T310 242 aa11.3□□□□□ -0.6
MAP1LC3B-207ENST00000565788 J3QL48 77 aa11.29□□□□□ -0.6
MAP1LC3B-207ENST00000565788 PRSS1P07477 247 aa11.29□□□□□ -0.6
MAP1LC3B-207ENST00000565788 TRGC1P0CF51 173 aa11.29□□□□□ -0.6
MAP1LC3B-207ENST00000565788 NUDT10Q8NFP7 164 aa11.29□□□□□ -0.6
MAP1LC3B-207ENST00000565788 NUDT11Q96G61 164 aa11.29□□□□□ -0.6
MAP1LC3B-207ENST00000565788 DPH3P1Q9H4G8 78 aa11.29□□□□□ -0.6
MAP1LC3B-207ENST00000565788 BIN3Q9NQY0 253 aa11.29□□□□□ -0.6
MAP1LC3B-207ENST00000565788 NTF3P20783 257 aa11.28□□□□□ -0.6
MAP1LC3B-207ENST00000565788 KRTAP10-4P60372 401 aaPredicted RBP11.28□□□□□ -0.6
MAP1LC3B-207ENST00000565788 C20orf203Q8NBC4 194 aa11.28□□□□□ -0.6
MAP1LC3B-207ENST00000565788 DEFB104AQ8WTQ1 72 aa11.28□□□□□ -0.6
MAP1LC3B-207ENST00000565788 CTRLP40313 264 aa11.27□□□□□ -0.61
MAP1LC3B-207ENST00000565788 REG3AQ06141 175 aa11.27□□□□□ -0.61
MAP1LC3B-207ENST00000565788 C9orf62Q8N4C0 152 aa11.27□□□□□ -0.61
MAP1LC3B-207ENST00000565788 TMEM243Q9BU79 118 aa11.27□□□□□ -0.61
MAP1LC3B-207ENST00000565788 IGLV4-60A0A075B6I1 120 aa11.26□□□□□ -0.61
MAP1LC3B-207ENST00000565788 IGLV10-54A0A075B6I4 117 aa11.26□□□□□ -0.61
MAP1LC3B-207ENST00000565788 K7EN84 100 aa11.26□□□□□ -0.61
MAP1LC3B-207ENST00000565788 RNASE7Q9H1E1 156 aaKnown RBP11.26□□□□□ -0.61
MAP1LC3B-207ENST00000565788 NIT2Q9NQR4 276 aa11.26□□□□□ -0.61
MAP1LC3B-207ENST00000565788 KRTAP29-1A8MX34 341 aaPredicted RBP11.25□□□□□ -0.61
MAP1LC3B-207ENST00000565788 TAGLN2P37802 199 aaKnown RBP11.25□□□□□ -0.61
MAP1LC3B-207ENST00000565788 WDR73Q6P4I2 378 aa11.25□□□□□ -0.61
MAP1LC3B-207ENST00000565788 PGLYRP4Q96LB8 373 aa11.25□□□□□ -0.61
MAP1LC3B-207ENST00000565788 GFRA4Q9GZZ7 299 aa11.25□□□□□ -0.61
MAP1LC3B-207ENST00000565788 RPP21Q9H633 154 aaKnown RBP11.25□□□□□ -0.61
MAP1LC3B-207ENST00000565788 LRP1Q07954 4544 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 132 ms