RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 TRBV25-1A0A075B6N4 114 aa13.47□□□□□ -0.25
HERC2-204ENST00000563945 A0A0D9SG52 128 aa13.47□□□□□ -0.25
HERC2-204ENST00000563945 PAGE4O60829 102 aa13.47□□□□□ -0.25
HERC2-204ENST00000563945 CXCL1P09341 107 aa13.47□□□□□ -0.25
HERC2-204ENST00000563945 GAGE6Q13070 117 aa13.47□□□□□ -0.25
HERC2-204ENST00000563945 LINC00269Q8N2A0 174 aa13.47□□□□□ -0.25
HERC2-204ENST00000563945 HMCN2Q8NDA2 5059 aa13.46□□□□□ -0.25
HERC2-204ENST00000563945 FAT3Q8TDW7 4589 aa13.46□□□□□ -0.25
HERC2-204ENST00000563945 MUC21A0A0G2JKD1 596 aa13.46□□□□□ -0.25
HERC2-204ENST00000563945 MUC21A0A140T8X8 626 aa13.46□□□□□ -0.25
HERC2-204ENST00000563945 RBX1P62877 108 aa13.46□□□□□ -0.25
HERC2-204ENST00000563945 BAGE2Q86Y30 109 aa13.46□□□□□ -0.25
HERC2-204ENST00000563945 CLRN3Q8NCR9 226 aa13.46□□□□□ -0.25
HERC2-204ENST00000563945 DAZAP1Q96EP5 407 aaKnown RBP13.46□□□□□ -0.25
HERC2-204ENST00000563945 PFDN1O60925 122 aa13.45□□□□□ -0.26
HERC2-204ENST00000563945 OR5AL1P0C617 328 aa13.44□□□□□ -0.26
HERC2-204ENST00000563945 PRR34Q9NV39 138 aa13.44□□□□□ -0.26
HERC2-204ENST00000563945 VAX2Q9UIW0 290 aa13.44□□□□□ -0.26
HERC2-204ENST00000563945 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.44□□□□□ -0.26
HERC2-204ENST00000563945 SNAI2O43623 268 aa13.43□□□□□ -0.26
HERC2-204ENST00000563945 NTM-AS1Q6ZSK4 140 aa13.43□□□□□ -0.26
HERC2-204ENST00000563945 AP1S3Q96PC3 154 aa13.43□□□□□ -0.26
HERC2-204ENST00000563945 SSBP4Q9BWG4 385 aaPredicted RBP13.43□□□□□ -0.26
HERC2-204ENST00000563945 AP5S1Q9NUS5 200 aa13.43□□□□□ -0.26
HERC2-204ENST00000563945 IGHV1-24A0A0C4DH33 117 aa13.42□□□□□ -0.26
HERC2-204ENST00000563945 ARPC5O15511 151 aa13.42□□□□□ -0.26
HERC2-204ENST00000563945 HNRNPA3P51991 378 aaKnown RBP13.42□□□□□ -0.26
HERC2-204ENST00000563945 SDIM1Q6ZPB5 146 aa13.42□□□□□ -0.26
HERC2-204ENST00000563945 SFT2D1Q8WV19 159 aa13.42□□□□□ -0.26
HERC2-204ENST00000563945 UBR4Q5T4S7 5183 aa13.42□□□□□ -0.26
HERC2-204ENST00000563945 IGLV10-54A0A075B6I4 117 aa13.41□□□□□ -0.26
HERC2-204ENST00000563945 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.41□□□□□ -0.26
HERC2-204ENST00000563945 hDV102S1A0JD36 115 aa13.41□□□□□ -0.26
HERC2-204ENST00000563945 H7C1H1 209 aa13.41□□□□□ -0.26
HERC2-204ENST00000563945 REG3AQ06141 175 aa13.41□□□□□ -0.26
HERC2-204ENST00000563945 A0A1B0GV50 99 aa13.4□□□□□ -0.26
HERC2-204ENST00000563945 SCO2A0A1W2PP80 73 aa13.4□□□□□ -0.26
HERC2-204ENST00000563945 TRAV8-4A0A0B4J246 113 aa13.39□□□□□ -0.27
HERC2-204ENST00000563945 P01737 135 aa13.39□□□□□ -0.27
HERC2-204ENST00000563945 MGPP08493 103 aa13.39□□□□□ -0.27
HERC2-204ENST00000563945 IQCJQ1A5X6 159 aa13.39□□□□□ -0.27
HERC2-204ENST00000563945 Q6ZRU5 148 aa13.39□□□□□ -0.27
HERC2-204ENST00000563945 FAM213BQ8TBF2 198 aa13.39□□□□□ -0.27
HERC2-204ENST00000563945 MLST8Q9BVC4 326 aa13.39□□□□□ -0.27
HERC2-204ENST00000563945 TPPP3Q9BW30 176 aa13.39□□□□□ -0.27
HERC2-204ENST00000563945 CYTL1Q9NRR1 136 aa13.39□□□□□ -0.27
HERC2-204ENST00000563945 IGHV3-64A0A075B6Q5 118 aa13.38□□□□□ -0.27
HERC2-204ENST00000563945 KRTAP26-1Q6PEX3 210 aa13.38□□□□□ -0.27
HERC2-204ENST00000563945 TMUB2Q71RG4 321 aa13.38□□□□□ -0.27
HERC2-204ENST00000563945 DPH3P1Q9H4G8 78 aa13.38□□□□□ -0.27
HERC2-204ENST00000563945 PANO1I0J062 215 aa13.37□□□□□ -0.27
HERC2-204ENST00000563945 CNBPP62633 177 aaKnown RBP13.37□□□□□ -0.27
HERC2-204ENST00000563945 MBD3L1Q8WWY6 194 aa13.37□□□□□ -0.27
HERC2-204ENST00000563945 KIF25-AS1Q9Y6Z4 181 aa13.37□□□□□ -0.27
HERC2-204ENST00000563945 UMAD1C9J7I0 102 aa13.36□□□□□ -0.27
HERC2-204ENST00000563945 KCNRGQ8N5I3 272 aa13.36□□□□□ -0.27
HERC2-204ENST00000563945 TMEM243Q9BU79 118 aa13.36□□□□□ -0.27
HERC2-204ENST00000563945 GZMBP10144 247 aa13.35□□□□□ -0.27
HERC2-204ENST00000563945 RAB5CP51148 216 aa13.35□□□□□ -0.27
HERC2-204ENST00000563945 RNF185Q96GF1 192 aa13.35□□□□□ -0.27
HERC2-204ENST00000563945 UBE2L6O14933 153 aa13.34□□□□□ -0.27
HERC2-204ENST00000563945 RPS20P60866 119 aaKnown RBP13.34□□□□□ -0.27
HERC2-204ENST00000563945 WDR73Q6P4I2 378 aa13.34□□□□□ -0.27
HERC2-204ENST00000563945 PKHD1L1Q86WI1 4243 aa13.33□□□□□ -0.28
HERC2-204ENST00000563945 M0QY20 66 aa13.33□□□□□ -0.28
HERC2-204ENST00000563945 H2AFB1P0C5Y9 115 aa13.33□□□□□ -0.28
HERC2-204ENST00000563945 CACNG7P62955 275 aa13.33□□□□□ -0.28
HERC2-204ENST00000563945 FER1L6-AS1Q8NA97 138 aa13.33□□□□□ -0.28
HERC2-204ENST00000563945 C20orf203Q8NBC4 194 aa13.33□□□□□ -0.28
HERC2-204ENST00000563945 BATF3Q9NR55 127 aa13.33□□□□□ -0.28
HERC2-204ENST00000563945 A0A1B0GUV1 79 aa13.32□□□□□ -0.28
HERC2-204ENST00000563945 RPL35P42766 123 aaKnown RBP13.32□□□□□ -0.28
HERC2-204ENST00000563945 SULT1A2P50226 295 aa13.32□□□□□ -0.28
HERC2-204ENST00000563945 NKX2-5P52952 324 aaPredicted RBP13.32□□□□□ -0.28
HERC2-204ENST00000563945 CIRBPQ14011 172 aaKnown RBP13.32□□□□□ -0.28
HERC2-204ENST00000563945 C7orf33Q8WU49 177 aa13.32□□□□□ -0.28
HERC2-204ENST00000563945 A0A087WYN8 130 aa13.31□□□□□ -0.28
HERC2-204ENST00000563945 XKRY2A2RUG3 117 aa13.31□□□□□ -0.28
HERC2-204ENST00000563945 SUMO4Q6EEV6 95 aa13.31□□□□□ -0.28
HERC2-204ENST00000563945 CFAP161Q6P656 301 aa13.31□□□□□ -0.28
HERC2-204ENST00000563945 RASL11AQ6T310 242 aa13.31□□□□□ -0.28
HERC2-204ENST00000563945 OR2D3Q8NGH3 330 aa13.31□□□□□ -0.28
HERC2-204ENST00000563945 G3V3Q6 166 aa13.3□□□□□ -0.28
HERC2-204ENST00000563945 MT1HL1P0DM35 61 aa13.3□□□□□ -0.28
HERC2-204ENST00000563945 IGLV4-60A0A075B6I1 120 aa13.29□□□□□ -0.28
HERC2-204ENST00000563945 TRGC1P0CF51 173 aa13.29□□□□□ -0.28
HERC2-204ENST00000563945 CHTF8P0CG12 524 aa13.29□□□□□ -0.28
HERC2-204ENST00000563945 F2Z2F3 143 aa13.28□□□□□ -0.28
HERC2-204ENST00000563945 AMTP48728 403 aa13.28□□□□□ -0.28
HERC2-204ENST00000563945 EIF5AP63241 154 aaKnown RBP13.28□□□□□ -0.28
HERC2-204ENST00000563945 COTL1Q14019 142 aa13.28□□□□□ -0.28
HERC2-204ENST00000563945 NIT2Q9NQR4 276 aa13.28□□□□□ -0.28
HERC2-204ENST00000563945 KANTRA0A1W2PQU2 76 aa13.27□□□□□ -0.29
HERC2-204ENST00000563945 SMLR1H3BR10 107 aa13.27□□□□□ -0.29
HERC2-204ENST00000563945 ZNF345Q14585 488 aa13.27□□□□□ -0.29
HERC2-204ENST00000563945 SPACA4Q8TDM5 124 aa13.27□□□□□ -0.29
HERC2-204ENST00000563945 PGLYRP4Q96LB8 373 aa13.27□□□□□ -0.29
HERC2-204ENST00000563945 MANBALQ9NQG1 85 aa13.27□□□□□ -0.29
HERC2-204ENST00000563945 GNG13Q9P2W3 67 aa13.27□□□□□ -0.29
HERC2-204ENST00000563945 IGLC6P0CF74 106 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms