RNA–Protein interactions for RNA: ENST00000563917.2

CLN6-203, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-203ENST00000563917 XKRY2A2RUG3 117 aa6.27□□□□□ -1.41
CLN6-203ENST00000563917 HMSDA8MTL9 139 aa6.27□□□□□ -1.41
CLN6-203ENST00000563917 BCL2L11O43521 198 aa6.27□□□□□ -1.41
CLN6-203ENST00000563917 SNAI2O43623 268 aa6.27□□□□□ -1.41
CLN6-203ENST00000563917 HLA-DQA1P01909 254 aa6.27□□□□□ -1.41
CLN6-203ENST00000563917 RPS20P60866 119 aaKnown RBP6.27□□□□□ -1.41
CLN6-203ENST00000563917 LINC01620Q4KN68 170 aa6.27□□□□□ -1.41
CLN6-203ENST00000563917 EIF5AL1Q6IS14 154 aaKnown RBP6.27□□□□□ -1.41
CLN6-203ENST00000563917 ATRAIDQ6UW56 229 aa6.27□□□□□ -1.41
CLN6-203ENST00000563917 NEXN-AS1Q8NBZ9 246 aa6.27□□□□□ -1.41
CLN6-203ENST00000563917 DERL1Q9BUN8 251 aa6.27□□□□□ -1.41
CLN6-203ENST00000563917 MANBALQ9NQG1 85 aa6.27□□□□□ -1.41
CLN6-203ENST00000563917 SRRM2Q9UQ35 2752 aaKnown RBP6.27□□□□□ -1.41
CLN6-203ENST00000563917 MUC21A0A0G2JKD1 596 aa6.26□□□□□ -1.41
CLN6-203ENST00000563917 MUC21A0A140T8X8 626 aa6.26□□□□□ -1.41
CLN6-203ENST00000563917 G3V3Q6 166 aa6.26□□□□□ -1.41
CLN6-203ENST00000563917 RPL35P42766 123 aaKnown RBP6.26□□□□□ -1.41
CLN6-203ENST00000563917 MPV17L2Q567V2 206 aa6.26□□□□□ -1.41
CLN6-203ENST00000563917 DNAJC30Q96LL9 226 aa6.26□□□□□ -1.41
CLN6-203ENST00000563917 MLST8Q9BVC4 326 aa6.26□□□□□ -1.41
CLN6-203ENST00000563917 SSBP4Q9BWG4 385 aaPredicted RBP6.26□□□□□ -1.41
CLN6-203ENST00000563917 BIN3Q9NQY0 253 aa6.26□□□□□ -1.41
CLN6-203ENST00000563917 GNG13Q9P2W3 67 aa6.26□□□□□ -1.41
CLN6-203ENST00000563917 IGHV1-24A0A0C4DH33 117 aa6.25□□□□□ -1.41
CLN6-203ENST00000563917 IFNA1P01562 189 aa6.25□□□□□ -1.41
CLN6-203ENST00000563917 MGPP08493 103 aa6.25□□□□□ -1.41
CLN6-203ENST00000563917 RAB5CP51148 216 aa6.25□□□□□ -1.41
CLN6-203ENST00000563917 CACNG7P62955 275 aa6.25□□□□□ -1.41
CLN6-203ENST00000563917 GAGE6Q13070 117 aa6.25□□□□□ -1.41
CLN6-203ENST00000563917 ENHOQ6UWT2 76 aa6.25□□□□□ -1.41
CLN6-203ENST00000563917 VAX2Q9UIW0 290 aa6.25□□□□□ -1.41
CLN6-203ENST00000563917 KRTAP29-1A8MX34 341 aaPredicted RBP6.24□□□□□ -1.41
CLN6-203ENST00000563917 USP17L23D6RBM5 183 aa6.24□□□□□ -1.41
CLN6-203ENST00000563917 F2Z2F3 143 aa6.24□□□□□ -1.41
CLN6-203ENST00000563917 IGLV2-8P01709 118 aa6.24□□□□□ -1.41
CLN6-203ENST00000563917 TRGC1P0CF51 173 aa6.24□□□□□ -1.41
CLN6-203ENST00000563917 GNG4P50150 75 aa6.24□□□□□ -1.41
CLN6-203ENST00000563917 DGAT2L7PQ6IED9 249 aa6.24□□□□□ -1.41
CLN6-203ENST00000563917 LINC00269Q8N2A0 174 aa6.24□□□□□ -1.41
CLN6-203ENST00000563917 FER1L6-AS1Q8NA97 138 aa6.24□□□□□ -1.41
CLN6-203ENST00000563917 OR2D3Q8NGH3 330 aa6.24□□□□□ -1.41
CLN6-203ENST00000563917 CIRBP-AS1Q8TBR5 109 aa6.24□□□□□ -1.41
CLN6-203ENST00000563917 UBE2L6O14933 153 aa6.23□□□□□ -1.41
CLN6-203ENST00000563917 PDE6DO43924 150 aa6.23□□□□□ -1.41
CLN6-203ENST00000563917 P01737 135 aa6.23□□□□□ -1.41
CLN6-203ENST00000563917 RBX1P62877 108 aa6.23□□□□□ -1.41
CLN6-203ENST00000563917 CENPWQ5EE01 88 aa6.23□□□□□ -1.41
CLN6-203ENST00000563917 CLPSL2Q6UWE3 100 aa6.23□□□□□ -1.41
CLN6-203ENST00000563917 CLRN3Q8NCR9 226 aa6.23□□□□□ -1.41
CLN6-203ENST00000563917 SMIM12Q96EX1 92 aa6.23□□□□□ -1.41
CLN6-203ENST00000563917 AP5S1Q9NUS5 200 aa6.23□□□□□ -1.41
CLN6-203ENST00000563917 FAT1Q14517 4588 aa6.23□□□□□ -1.41
CLN6-203ENST00000563917 TRAV8-4A0A0B4J246 113 aa6.22□□□□□ -1.41
CLN6-203ENST00000563917 GZMBP10144 247 aa6.22□□□□□ -1.41
CLN6-203ENST00000563917 CCL20P78556 96 aa6.22□□□□□ -1.41
CLN6-203ENST00000563917 REG3AQ06141 175 aa6.22□□□□□ -1.41
CLN6-203ENST00000563917 IQCJQ1A5X6 159 aa6.22□□□□□ -1.41
CLN6-203ENST00000563917 C11orf52Q96A22 123 aa6.22□□□□□ -1.41
CLN6-203ENST00000563917 DPH3Q96FX2 82 aa6.22□□□□□ -1.41
CLN6-203ENST00000563917 TMEM243Q9BU79 118 aa6.22□□□□□ -1.41
CLN6-203ENST00000563917 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.21□□□□□ -1.42
CLN6-203ENST00000563917 TRAV1-1A0A0B4J248 108 aa6.21□□□□□ -1.42
CLN6-203ENST00000563917 M0QY20 66 aa6.21□□□□□ -1.42
CLN6-203ENST00000563917 OXTP01178 125 aa6.21□□□□□ -1.42
CLN6-203ENST00000563917 RPL37AP61513 92 aaKnown RBP6.21□□□□□ -1.42
CLN6-203ENST00000563917 MEF2BQ02080 365 aaPredicted RBP6.21□□□□□ -1.42
CLN6-203ENST00000563917 SERTAD4-AS1Q5TG53 156 aa6.21□□□□□ -1.42
CLN6-203ENST00000563917 WDR73Q6P4I2 378 aa6.21□□□□□ -1.42
CLN6-203ENST00000563917 RASL11AQ6T310 242 aa6.21□□□□□ -1.42
CLN6-203ENST00000563917 NTM-AS1Q6ZSK4 140 aa6.21□□□□□ -1.42
CLN6-203ENST00000563917 SMIM15Q7Z3B0 74 aa6.21□□□□□ -1.42
CLN6-203ENST00000563917 DPH3P1Q9H4G8 78 aa6.21□□□□□ -1.42
CLN6-203ENST00000563917 PRR34Q9NV39 138 aa6.21□□□□□ -1.42
CLN6-203ENST00000563917 MED9Q9NWA0 146 aa6.21□□□□□ -1.42
CLN6-203ENST00000563917 KIF25-AS1Q9Y6Z4 181 aa6.21□□□□□ -1.42
CLN6-203ENST00000563917 VPS13BQ7Z7G8 4022 aa6.2□□□□□ -1.42
CLN6-203ENST00000563917 IGLV10-54A0A075B6I4 117 aa6.2□□□□□ -1.42
CLN6-203ENST00000563917 hDV102S1A0JD36 115 aa6.2□□□□□ -1.42
CLN6-203ENST00000563917 PRSS1P07477 247 aa6.2□□□□□ -1.42
CLN6-203ENST00000563917 IGLC6P0CF74 106 aa6.2□□□□□ -1.42
CLN6-203ENST00000563917 TAGLN2P37802 199 aaKnown RBP6.2□□□□□ -1.42
CLN6-203ENST00000563917 SULT1A2P50226 295 aa6.2□□□□□ -1.42
CLN6-203ENST00000563917 NKX2-5P52952 324 aaPredicted RBP6.2□□□□□ -1.42
CLN6-203ENST00000563917 COTL1Q14019 142 aa6.2□□□□□ -1.42
CLN6-203ENST00000563917 SUMO4Q6EEV6 95 aa6.2□□□□□ -1.42
CLN6-203ENST00000563917 C9orf163Q8N9P6 203 aa6.2□□□□□ -1.42
CLN6-203ENST00000563917 NIT2Q9NQR4 276 aa6.2□□□□□ -1.42
CLN6-203ENST00000563917 A0A1B0GUV1 79 aa6.19□□□□□ -1.42
CLN6-203ENST00000563917 RAB19A4D1S5 217 aa6.19□□□□□ -1.42
CLN6-203ENST00000563917 AMTP48728 403 aa6.19□□□□□ -1.42
CLN6-203ENST00000563917 TWIST1Q15672 202 aa6.19□□□□□ -1.42
CLN6-203ENST00000563917 LYZL1Q6UWQ5 148 aa6.19□□□□□ -1.42
CLN6-203ENST00000563917 C19orf71A6NCJ1 209 aa6.18□□□□□ -1.42
CLN6-203ENST00000563917 BCL2P10415 239 aa6.18□□□□□ -1.42
CLN6-203ENST00000563917 NTF3P20783 257 aa6.18□□□□□ -1.42
CLN6-203ENST00000563917 AMMECR1LQ6DCA0 310 aa6.18□□□□□ -1.42
CLN6-203ENST00000563917 CFAP161Q6P656 301 aa6.18□□□□□ -1.42
CLN6-203ENST00000563917 PGLYRP4Q96LB8 373 aa6.18□□□□□ -1.42
CLN6-203ENST00000563917 HERC1Q15751 4861 aa6.18□□□□□ -1.42
CLN6-203ENST00000563917 IGHV3-64A0A075B6Q5 118 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms