RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 FAM229AH3BQW9 127 aa11.67□□□□□ -0.54
NME3-205ENST00000563854 IFNA1P01562 189 aa11.67□□□□□ -0.54
NME3-205ENST00000563854 GNG4P50150 75 aa11.67□□□□□ -0.54
NME3-205ENST00000563854 SULT1A2P50226 295 aa11.67□□□□□ -0.54
NME3-205ENST00000563854 C15orf54Q8N8G6 183 aa11.67□□□□□ -0.54
NME3-205ENST00000563854 CHCHD5Q9BSY4 110 aa11.67□□□□□ -0.54
NME3-205ENST00000563854 CHCHD7Q9BUK0 85 aa11.67□□□□□ -0.54
NME3-205ENST00000563854 CRPP02741 224 aa11.66□□□□□ -0.54
NME3-205ENST00000563854 MEF2BQ02080 365 aaPredicted RBP11.66□□□□□ -0.54
NME3-205ENST00000563854 LINC01620Q4KN68 170 aa11.66□□□□□ -0.54
NME3-205ENST00000563854 FER1L6-AS1Q8NA97 138 aa11.66□□□□□ -0.54
NME3-205ENST00000563854 IGLV2-8P01709 118 aa11.65□□□□□ -0.54
NME3-205ENST00000563854 ANGP03950 147 aaKnown RBP11.65□□□□□ -0.54
NME3-205ENST00000563854 RPS20P60866 119 aaKnown RBP11.65□□□□□ -0.54
NME3-205ENST00000563854 MPV17L2Q567V2 206 aa11.65□□□□□ -0.54
NME3-205ENST00000563854 TCTE3Q8IZS6 198 aa11.65□□□□□ -0.54
NME3-205ENST00000563854 MED9Q9NWA0 146 aa11.65□□□□□ -0.54
NME3-205ENST00000563854 PDE6DO43924 150 aa11.64□□□□□ -0.55
NME3-205ENST00000563854 C1orf43Q9BWL3 253 aa11.64□□□□□ -0.55
NME3-205ENST00000563854 P01737 135 aa11.63□□□□□ -0.55
NME3-205ENST00000563854 IGLC6P0CF74 106 aa11.63□□□□□ -0.55
NME3-205ENST00000563854 BCL2P10415 239 aa11.63□□□□□ -0.55
NME3-205ENST00000563854 Q0VG73 95 aa11.63□□□□□ -0.55
NME3-205ENST00000563854 SLC51BQ86UW2 128 aa11.63□□□□□ -0.55
NME3-205ENST00000563854 Q8N976 141 aa11.63□□□□□ -0.55
NME3-205ENST00000563854 KIF25-AS1Q9Y6Z4 181 aa11.63□□□□□ -0.55
NME3-205ENST00000563854 XKRY2A2RUG3 117 aa11.62□□□□□ -0.55
NME3-205ENST00000563854 C19orf71A6NCJ1 209 aa11.62□□□□□ -0.55
NME3-205ENST00000563854 CLPSL2Q6UWE3 100 aa11.62□□□□□ -0.55
NME3-205ENST00000563854 TRBV20OR9-2A0A075B6H5 130 aa11.61□□□□□ -0.55
NME3-205ENST00000563854 HLA-DQA1P01909 254 aa11.61□□□□□ -0.55
NME3-205ENST00000563854 C1QBP02746 253 aa11.61□□□□□ -0.55
NME3-205ENST00000563854 CACNG7P62955 275 aa11.61□□□□□ -0.55
NME3-205ENST00000563854 GAGE6Q13070 117 aa11.61□□□□□ -0.55
NME3-205ENST00000563854 ENHOQ6UWT2 76 aa11.61□□□□□ -0.55
NME3-205ENST00000563854 NTM-AS1Q6ZSK4 140 aa11.61□□□□□ -0.55
NME3-205ENST00000563854 SMIM12Q96EX1 92 aa11.61□□□□□ -0.55
NME3-205ENST00000563854 VAX2Q9UIW0 290 aa11.61□□□□□ -0.55
NME3-205ENST00000563854 PKIAP61925 76 aa11.6□□□□□ -0.55
NME3-205ENST00000563854 TMEM97Q5BJF2 176 aa11.6□□□□□ -0.55
NME3-205ENST00000563854 SUMO4Q6EEV6 95 aa11.6□□□□□ -0.55
NME3-205ENST00000563854 ATRAIDQ6UW56 229 aa11.6□□□□□ -0.55
NME3-205ENST00000563854 hCG_2014768A0A024R1R8 64 aa11.59□□□□□ -0.55
NME3-205ENST00000563854 TRBV25-1A0A075B6N4 114 aa11.59□□□□□ -0.55
NME3-205ENST00000563854 H7C1H1 209 aa11.59□□□□□ -0.55
NME3-205ENST00000563854 LYZL1Q6UWQ5 148 aa11.59□□□□□ -0.55
NME3-205ENST00000563854 BIN3Q9NQY0 253 aa11.59□□□□□ -0.55
NME3-205ENST00000563854 HERC1Q15751 4861 aa11.59□□□□□ -0.55
NME3-205ENST00000563854 M0QY20 66 aa11.58□□□□□ -0.56
NME3-205ENST00000563854 NKX2-5P52952 324 aaPredicted RBP11.58□□□□□ -0.56
NME3-205ENST00000563854 RBX1P62877 108 aa11.58□□□□□ -0.56
NME3-205ENST00000563854 Q6ZSA8 131 aa11.58□□□□□ -0.56
NME3-205ENST00000563854 VPS13BQ7Z7G8 4022 aa11.58□□□□□ -0.56
NME3-205ENST00000563854 IGHV1-24A0A0C4DH33 117 aa11.57□□□□□ -0.56
NME3-205ENST00000563854 F2Z2F3 143 aa11.57□□□□□ -0.56
NME3-205ENST00000563854 TRGC1P0CF51 173 aa11.57□□□□□ -0.56
NME3-205ENST00000563854 AKAP14Q86UN6 197 aa11.57□□□□□ -0.56
NME3-205ENST00000563854 LINC00528Q8N1L1 170 aa11.57□□□□□ -0.56
NME3-205ENST00000563854 DEFB104AQ8WTQ1 72 aa11.57□□□□□ -0.56
NME3-205ENST00000563854 DNAH8Q96JB1 4490 aa11.56□□□□□ -0.56
NME3-205ENST00000563854 C14orf177Q52M58 125 aa11.56□□□□□ -0.56
NME3-205ENST00000563854 SCXQ7RTU7 201 aa11.56□□□□□ -0.56
NME3-205ENST00000563854 LINC00269Q8N2A0 174 aa11.56□□□□□ -0.56
NME3-205ENST00000563854 NUDT10Q8NFP7 164 aa11.56□□□□□ -0.56
NME3-205ENST00000563854 NUDT11Q96G61 164 aa11.56□□□□□ -0.56
NME3-205ENST00000563854 RNASE7Q9H1E1 156 aaKnown RBP11.56□□□□□ -0.56
NME3-205ENST00000563854 DPH3P1Q9H4G8 78 aa11.56□□□□□ -0.56
NME3-205ENST00000563854 SRRM2Q9UQ35 2752 aaKnown RBP11.56□□□□□ -0.56
NME3-205ENST00000563854 USP17L23D6RBM5 183 aa11.55□□□□□ -0.56
NME3-205ENST00000563854 NTF3P20783 257 aa11.55□□□□□ -0.56
NME3-205ENST00000563854 TAGLN2P37802 199 aaKnown RBP11.55□□□□□ -0.56
NME3-205ENST00000563854 MIAQ16674 131 aa11.55□□□□□ -0.56
NME3-205ENST00000563854 RASL11AQ6T310 242 aa11.55□□□□□ -0.56
NME3-205ENST00000563854 ALKAL2Q6UX46 152 aa11.55□□□□□ -0.56
NME3-205ENST00000563854 C9orf62Q8N4C0 152 aa11.55□□□□□ -0.56
NME3-205ENST00000563854 RPP21Q9H633 154 aaKnown RBP11.55□□□□□ -0.56
NME3-205ENST00000563854 PLA2G1BP04054 148 aaKnown RBP11.54□□□□□ -0.56
NME3-205ENST00000563854 TWIST1Q15672 202 aa11.54□□□□□ -0.56
NME3-205ENST00000563854 IQCJQ1A5X6 159 aa11.54□□□□□ -0.56
NME3-205ENST00000563854 Q6ZNX1 250 aa11.54□□□□□ -0.56
NME3-205ENST00000563854 K7EN84 100 aa11.53□□□□□ -0.56
NME3-205ENST00000563854 CTRLP40313 264 aa11.53□□□□□ -0.56
NME3-205ENST00000563854 CEBPGP53567 150 aa11.53□□□□□ -0.56
NME3-205ENST00000563854 TMEM243Q9BU79 118 aa11.53□□□□□ -0.56
NME3-205ENST00000563854 IGLV10-54A0A075B6I4 117 aa11.52□□□□□ -0.57
NME3-205ENST00000563854 OCC1Q8TAD7 63 aa11.52□□□□□ -0.57
NME3-205ENST00000563854 NIT2Q9NQR4 276 aa11.52□□□□□ -0.57
NME3-205ENST00000563854 PRR34Q9NV39 138 aa11.52□□□□□ -0.57
NME3-205ENST00000563854 FLG2Q5D862 2391 aaPredicted RBP11.5□□□□□ -0.57
NME3-205ENST00000563854 DMBT1Q9UGM3 2413 aaPredicted RBP11.5□□□□□ -0.57
NME3-205ENST00000563854 MYCBP2O75592 4640 aa11.5□□□□□ -0.57
NME3-205ENST00000563854 TRAV26-2A0A0B4J265 109 aa11.5□□□□□ -0.57
NME3-205ENST00000563854 UBE2L6O14933 153 aa11.5□□□□□ -0.57
NME3-205ENST00000563854 BLOC1S1P78537 153 aa11.5□□□□□ -0.57
NME3-205ENST00000563854 REG3AQ06141 175 aa11.5□□□□□ -0.57
NME3-205ENST00000563854 CHAC1Q9BUX1 264 aa11.5□□□□□ -0.57
NME3-205ENST00000563854 PRSS1P07477 247 aa11.49□□□□□ -0.57
NME3-205ENST00000563854 AMTP48728 403 aa11.49□□□□□ -0.57
NME3-205ENST00000563854 COTL1Q14019 142 aa11.49□□□□□ -0.57
NME3-205ENST00000563854 WDR73Q6P4I2 378 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms