RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 ZNF56Q15929 161 aa12.99□□□□□ -0.33
COMMD4-208ENST00000563220 Q8N8P6 123 aa12.99□□□□□ -0.33
COMMD4-208ENST00000563220 NXT2Q9NPJ8 142 aaKnown RBP12.99□□□□□ -0.33
COMMD4-208ENST00000563220 A0A096LNJ9 63 aa12.98□□□□□ -0.33
COMMD4-208ENST00000563220 IGHV3-73A0A0B4J1V6 119 aa12.98□□□□□ -0.33
COMMD4-208ENST00000563220 SUMO2P61956 95 aaKnown RBP12.98□□□□□ -0.33
COMMD4-208ENST00000563220 RRN3P1Q2M238 152 aa12.98□□□□□ -0.33
COMMD4-208ENST00000563220 CFAP126Q5VTH2 177 aa12.98□□□□□ -0.33
COMMD4-208ENST00000563220 M0QY20 66 aa12.97□□□□□ -0.33
COMMD4-208ENST00000563220 EGFEM1PQ0D2K5 195 aa12.97□□□□□ -0.33
COMMD4-208ENST00000563220 GAGE1Q13065 139 aa12.97□□□□□ -0.33
COMMD4-208ENST00000563220 C16orf74Q96GX8 76 aa12.97□□□□□ -0.33
COMMD4-208ENST00000563220 C20orf78Q9BR46 151 aa12.97□□□□□ -0.33
COMMD4-208ENST00000563220 IGHV4-30-4P0DP06 118 aa12.97□□□□□ -0.33
COMMD4-208ENST00000563220 LINC01545Q5VT33 79 aa12.97□□□□□ -0.33
COMMD4-208ENST00000563220 KIR2DL5BQ8NHK3 375 aa12.97□□□□□ -0.33
COMMD4-208ENST00000563220 NOP10Q9NPE3 64 aaKnown RBP12.97□□□□□ -0.33
COMMD4-208ENST00000563220 TRGV1A0A0A0MS02 117 aa12.96□□□□□ -0.33
COMMD4-208ENST00000563220 RS1O15537 224 aa12.96□□□□□ -0.33
COMMD4-208ENST00000563220 PPP1R17O96001 155 aa12.96□□□□□ -0.33
COMMD4-208ENST00000563220 DAZ2Q13117 558 aaKnown RBP12.96□□□□□ -0.33
COMMD4-208ENST00000563220 SMIM2Q9BVW6 85 aa12.96□□□□□ -0.33
COMMD4-208ENST00000563220 ZNF25P17030 456 aaPredicted RBP12.95□□□□□ -0.34
COMMD4-208ENST00000563220 Q6ZTI0 123 aa12.95□□□□□ -0.34
COMMD4-208ENST00000563220 PKD1L1Q8TDX9 2849 aa12.95□□□□□ -0.34
COMMD4-208ENST00000563220 BATFQ16520 125 aa12.95□□□□□ -0.34
COMMD4-208ENST00000563220 Q6ZSN1 163 aa12.95□□□□□ -0.34
COMMD4-208ENST00000563220 APOC4P55056 127 aa12.94□□□□□ -0.34
COMMD4-208ENST00000563220 MDFIQ99750 246 aa12.94□□□□□ -0.34
COMMD4-208ENST00000563220 X6R8D5 127 aa12.94□□□□□ -0.34
COMMD4-208ENST00000563220 HSBP1L1C9JCN9 74 aa12.93□□□□□ -0.34
COMMD4-208ENST00000563220 G3V4G9 280 aa12.93□□□□□ -0.34
COMMD4-208ENST00000563220 DLEU1O43261 78 aa12.93□□□□□ -0.34
COMMD4-208ENST00000563220 LGALS9BQ3B8N2 356 aa12.93□□□□□ -0.34
COMMD4-208ENST00000563220 OVOL2Q9BRP0 275 aa12.93□□□□□ -0.34
COMMD4-208ENST00000563220 POLR2KP53803 58 aaKnown RBP12.93□□□□□ -0.34
COMMD4-208ENST00000563220 STPG4Q8N801 248 aa12.93□□□□□ -0.34
COMMD4-208ENST00000563220 TRBV6-5A0A0K0K1A5 114 aa12.92□□□□□ -0.34
COMMD4-208ENST00000563220 HBDP02042 147 aa12.92□□□□□ -0.34
COMMD4-208ENST00000563220 DEFB135Q30KP9 77 aa12.92□□□□□ -0.34
COMMD4-208ENST00000563220 NEGR1Q7Z3B1 354 aa12.92□□□□□ -0.34
COMMD4-208ENST00000563220 ANK2Q01484 3957 aa12.91□□□□□ -0.34
COMMD4-208ENST00000563220 P0DMU3 169 aa12.91□□□□□ -0.34
COMMD4-208ENST00000563220 FAM231AP0DMU4 169 aa12.91□□□□□ -0.34
COMMD4-208ENST00000563220 FAM231CP0DMU5 169 aa12.91□□□□□ -0.34
COMMD4-208ENST00000563220 G0S2P27469 103 aa12.91□□□□□ -0.34
COMMD4-208ENST00000563220 FCER1GP30273 86 aa12.91□□□□□ -0.34
COMMD4-208ENST00000563220 LAGE3Q14657 143 aa12.91□□□□□ -0.34
COMMD4-208ENST00000563220 EDA2RQ9HAV5 297 aa12.91□□□□□ -0.34
COMMD4-208ENST00000563220 SDHAF1A6NFY7 115 aa12.91□□□□□ -0.34
COMMD4-208ENST00000563220 RHODO00212 210 aa12.91□□□□□ -0.34
COMMD4-208ENST00000563220 RPL32P62910 135 aaKnown RBP12.91□□□□□ -0.34
COMMD4-208ENST00000563220 OR4C5Q8NGB2 326 aa12.91□□□□□ -0.34
COMMD4-208ENST00000563220 ZNF479Q96JC4 524 aa12.91□□□□□ -0.34
COMMD4-208ENST00000563220 Q9UF83 564 aa12.91□□□□□ -0.34
COMMD4-208ENST00000563220 EMP1P54849 157 aa12.9□□□□□ -0.34
COMMD4-208ENST00000563220 ZFP2Q6ZN57 461 aa12.9□□□□□ -0.34
COMMD4-208ENST00000563220 NACAE9PAV3 2078 aa12.9□□□□□ -0.34
COMMD4-208ENST00000563220 hDV102S1A0JD36 115 aa12.89□□□□□ -0.35
COMMD4-208ENST00000563220 GAGE12BA1L429 117 aa12.89□□□□□ -0.35
COMMD4-208ENST00000563220 SMIM9A6NGZ8 99 aa12.89□□□□□ -0.35
COMMD4-208ENST00000563220 GAGE7O76087 117 aa12.89□□□□□ -0.35
COMMD4-208ENST00000563220 GAGE12FP0CL80 117 aa12.89□□□□□ -0.35
COMMD4-208ENST00000563220 GAGE12GP0CL81 117 aa12.89□□□□□ -0.35
COMMD4-208ENST00000563220 GAGE12IP0CL82 117 aa12.89□□□□□ -0.35
COMMD4-208ENST00000563220 SLC25A34Q6PIV7 304 aa12.89□□□□□ -0.35
COMMD4-208ENST00000563220 DEFB104AQ8WTQ1 72 aa12.89□□□□□ -0.35
COMMD4-208ENST00000563220 H7C1H1 209 aa12.89□□□□□ -0.35
COMMD4-208ENST00000563220 IGHV3-53P01767 116 aa12.89□□□□□ -0.35
COMMD4-208ENST00000563220 NBEAL2Q6ZNJ1 2754 aa12.88□□□□□ -0.35
COMMD4-208ENST00000563220 TRAV4A0A0B4J268 109 aa12.88□□□□□ -0.35
COMMD4-208ENST00000563220 VCYO14598 125 aa12.88□□□□□ -0.35
COMMD4-208ENST00000563220 SAMD5Q5TGI4 173 aa12.88□□□□□ -0.35
COMMD4-208ENST00000563220 LGALS9CQ6DKI2 356 aa12.88□□□□□ -0.35
COMMD4-208ENST00000563220 TRBV27A0A0K0K1C4 114 aa12.87□□□□□ -0.35
COMMD4-208ENST00000563220 OR11H2Q8NH07 326 aa12.87□□□□□ -0.35
COMMD4-208ENST00000563220 PMCHL2Q9BQD1 86 aa12.87□□□□□ -0.35
COMMD4-208ENST00000563220 HINT1P49773 126 aaPredicted RBP12.87□□□□□ -0.35
COMMD4-208ENST00000563220 ORAOV1Q8WV07 137 aa12.87□□□□□ -0.35
COMMD4-208ENST00000563220 A8MZ25 164 aa12.86□□□□□ -0.35
COMMD4-208ENST00000563220 K7EMI3 77 aa12.86□□□□□ -0.35
COMMD4-208ENST00000563220 NUDT3O95989 172 aa12.86□□□□□ -0.35
COMMD4-208ENST00000563220 ORMDL2Q53FV1 153 aa12.86□□□□□ -0.35
COMMD4-208ENST00000563220 DNAH3Q8TD57 4116 aa12.86□□□□□ -0.35
COMMD4-208ENST00000563220 TRGV2A0A075B6R0 118 aa12.85□□□□□ -0.35
COMMD4-208ENST00000563220 NEXN-AS1Q8NBZ9 246 aa12.85□□□□□ -0.35
COMMD4-208ENST00000563220 RNF183Q96D59 192 aa12.85□□□□□ -0.35
COMMD4-208ENST00000563220 C18orf15Q96N68 181 aa12.85□□□□□ -0.35
COMMD4-208ENST00000563220 COX8AP10176 69 aa12.84□□□□□ -0.35
COMMD4-208ENST00000563220 IFI27L1Q96BM0 104 aa12.84□□□□□ -0.35
COMMD4-208ENST00000563220 KIR2DL4Q99706 377 aa12.84□□□□□ -0.35
COMMD4-208ENST00000563220 H0Y8G0 127 aa12.83□□□□□ -0.36
COMMD4-208ENST00000563220 LINC00612Q8N6U2 182 aa12.83□□□□□ -0.36
COMMD4-208ENST00000563220 TNFRSF18Q9Y5U5 241 aa12.83□□□□□ -0.36
COMMD4-208ENST00000563220 IGHV4-28A0A0C4DH34 117 aa12.82□□□□□ -0.36
COMMD4-208ENST00000563220 DEFB4AO15263 64 aa12.82□□□□□ -0.36
COMMD4-208ENST00000563220 NPSP0C0P6 89 aa12.82□□□□□ -0.36
COMMD4-208ENST00000563220 I3L3M4 83 aa12.82□□□□□ -0.36
COMMD4-208ENST00000563220 DEFB130BP0DP73 79 aa12.82□□□□□ -0.36
COMMD4-208ENST00000563220 DEFB130AP0DP74 79 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms