RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 C15orf32Q32M92 178 aa4.33□□□□□ -1.72
USP3-212ENST00000559276 PCP2Q8IVA1 136 aa4.33□□□□□ -1.72
USP3-212ENST00000559276 FAM223AQ8IWN6 122 aa4.33□□□□□ -1.72
USP3-212ENST00000559276 RNF185Q96GF1 192 aa4.33□□□□□ -1.72
USP3-212ENST00000559276 FANCD2OSQ96PS1 177 aa4.33□□□□□ -1.72
USP3-212ENST00000559276 OVOL2Q9BRP0 275 aa4.33□□□□□ -1.72
USP3-212ENST00000559276 C21orf62Q9NYP8 219 aa4.33□□□□□ -1.72
USP3-212ENST00000559276 TIMM8BQ9Y5J9 83 aaPredicted RBP4.33□□□□□ -1.72
USP3-212ENST00000559276 DNAH10Q8IVF4 4471 aa4.33□□□□□ -1.72
USP3-212ENST00000559276 HERC2O95714 4834 aa4.32□□□□□ -1.72
USP3-212ENST00000559276 IGLV2-18A0A075B6J9 118 aa4.32□□□□□ -1.72
USP3-212ENST00000559276 TEX48A0A1B0GUV7 120 aa4.32□□□□□ -1.72
USP3-212ENST00000559276 A4D1N5 150 aa4.32□□□□□ -1.72
USP3-212ENST00000559276 GAGE12HA6NDE8 117 aa4.32□□□□□ -1.72
USP3-212ENST00000559276 OR11H12B2RN74 326 aa4.32□□□□□ -1.72
USP3-212ENST00000559276 H7C1H1 209 aa4.32□□□□□ -1.72
USP3-212ENST00000559276 M0R3E3 92 aa4.32□□□□□ -1.72
USP3-212ENST00000559276 LGALS9O00182 355 aa4.32□□□□□ -1.72
USP3-212ENST00000559276 SNAI2O43623 268 aa4.32□□□□□ -1.72
USP3-212ENST00000559276 IGHV3-23P01764 117 aa4.32□□□□□ -1.72
USP3-212ENST00000559276 MED14OSP0DP75 135 aa4.32□□□□□ -1.72
USP3-212ENST00000559276 FXYD2P54710 66 aa4.32□□□□□ -1.72
USP3-212ENST00000559276 RPL24P83731 157 aaKnown RBP4.32□□□□□ -1.72
USP3-212ENST00000559276 ATP5G2Q06055 141 aa4.32□□□□□ -1.72
USP3-212ENST00000559276 LAGE3Q14657 143 aa4.32□□□□□ -1.72
USP3-212ENST00000559276 RRN3P1Q2M238 152 aa4.32□□□□□ -1.72
USP3-212ENST00000559276 FAM106AQ4KMX7 169 aa4.32□□□□□ -1.72
USP3-212ENST00000559276 ORMDL2Q53FV1 153 aa4.32□□□□□ -1.72
USP3-212ENST00000559276 PAPPA-AS1Q5QFB9 102 aa4.32□□□□□ -1.72
USP3-212ENST00000559276 GPHB5Q86YW7 130 aa4.32□□□□□ -1.72
USP3-212ENST00000559276 TMEM61Q8N0U2 210 aa4.32□□□□□ -1.72
USP3-212ENST00000559276 LINC00476Q8WZB0 136 aa4.32□□□□□ -1.72
USP3-212ENST00000559276 ZNF479Q96JC4 524 aa4.32□□□□□ -1.72
USP3-212ENST00000559276 C8orf49Q96NF6 230 aa4.32□□□□□ -1.72
USP3-212ENST00000559276 C20orf78Q9BR46 151 aa4.32□□□□□ -1.72
USP3-212ENST00000559276 ZFAND3Q9H8U3 227 aa4.32□□□□□ -1.72
USP3-212ENST00000559276 SPANXB1Q9NS25 103 aaPredicted RBP4.32□□□□□ -1.72
USP3-212ENST00000559276 PEMTQ9UBM1 199 aa4.32□□□□□ -1.72
USP3-212ENST00000559276 DKK2Q9UBU2 259 aa4.32□□□□□ -1.72
USP3-212ENST00000559276 S4R3C0 116 aa4.32□□□□□ -1.72
USP3-212ENST00000559276 HECTD4Q9Y4D8 3996 aa4.31□□□□□ -1.72
USP3-212ENST00000559276 IGLL5B9A064 214 aa4.31□□□□□ -1.72
USP3-212ENST00000559276 F8VRH5 84 aa4.31□□□□□ -1.72
USP3-212ENST00000559276 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.31□□□□□ -1.72
USP3-212ENST00000559276 M0R381 172 aa4.31□□□□□ -1.72
USP3-212ENST00000559276 ORM1P02763 201 aa4.31□□□□□ -1.72
USP3-212ENST00000559276 TCTAP57738 103 aa4.31□□□□□ -1.72
USP3-212ENST00000559276 ZC2HC1BQ5TFG8 222 aa4.31□□□□□ -1.72
USP3-212ENST00000559276 UNQ9165/PRO28630Q6UXU0 137 aa4.31□□□□□ -1.72
USP3-212ENST00000559276 IL17DQ8TAD2 202 aa4.31□□□□□ -1.72
USP3-212ENST00000559276 RAB37Q96AX2 223 aa4.31□□□□□ -1.72
USP3-212ENST00000559276 C16orf92Q96LL3 132 aa4.31□□□□□ -1.72
USP3-212ENST00000559276 C17orf77Q96MU5 243 aa4.31□□□□□ -1.72
USP3-212ENST00000559276 NHP2Q9NX24 153 aaKnown RBP4.31□□□□□ -1.72
USP3-212ENST00000559276 VPS13DQ5THJ4 4388 aa4.31□□□□□ -1.72
USP3-212ENST00000559276 TRBV7-3A0A075B6L6 115 aa4.3□□□□□ -1.72
USP3-212ENST00000559276 TRBV20-1A0A075B6N2 111 aa4.3□□□□□ -1.72
USP3-212ENST00000559276 IGKV2-40A0A087WW87 121 aaPredicted RBP4.3□□□□□ -1.72
USP3-212ENST00000559276 IGKV2D-26A0A0A0MRZ7 120 aa4.3□□□□□ -1.72
USP3-212ENST00000559276 IGHV3-21A0A0B4J1V1 117 aa4.3□□□□□ -1.72
USP3-212ENST00000559276 TRBV7-9A0A0J9YWB2 115 aa4.3□□□□□ -1.72
USP3-212ENST00000559276 MYMXA0A1B0GTQ4 84 aa4.3□□□□□ -1.72
USP3-212ENST00000559276 F8W735 103 aaPredicted RBP4.3□□□□□ -1.72
USP3-212ENST00000559276 H3BMG7 143 aa4.3□□□□□ -1.72
USP3-212ENST00000559276 M0QXV9 152 aa4.3□□□□□ -1.72
USP3-212ENST00000559276 IGKV2D-40P01614 121 aaPredicted RBP4.3□□□□□ -1.72
USP3-212ENST00000559276 AZU1P20160 251 aa4.3□□□□□ -1.72
USP3-212ENST00000559276 RPL32P62910 135 aaKnown RBP4.3□□□□□ -1.72
USP3-212ENST00000559276 C12orf74Q32Q52 190 aa4.3□□□□□ -1.72
USP3-212ENST00000559276 GAGE13Q4V321 117 aa4.3□□□□□ -1.72
USP3-212ENST00000559276 CLEC19AQ6UXS0 136 aa4.3□□□□□ -1.72
USP3-212ENST00000559276 C9orf47Q6ZRZ4 202 aa4.3□□□□□ -1.72
USP3-212ENST00000559276 WFDC3Q8IUB2 231 aa4.3□□□□□ -1.72
USP3-212ENST00000559276 OR11H2Q8NH07 326 aa4.3□□□□□ -1.72
USP3-212ENST00000559276 DYNLRB2Q8TF09 96 aa4.3□□□□□ -1.72
USP3-212ENST00000559276 PCLOQ9Y6V0 5065 aa4.3□□□□□ -1.72
USP3-212ENST00000559276 TMSB15BA0A087X1C1 80 aa4.29□□□□□ -1.72
USP3-212ENST00000559276 A0A0J9YWU9 116 aa4.29□□□□□ -1.72
USP3-212ENST00000559276 CTSGP08311 255 aa4.29□□□□□ -1.72
USP3-212ENST00000559276 ZNF80P51504 273 aaPredicted RBP4.29□□□□□ -1.72
USP3-212ENST00000559276 TMEM78Q5T7P6 136 aa4.29□□□□□ -1.72
USP3-212ENST00000559276 NRACQ8N912 160 aa4.29□□□□□ -1.72
USP3-212ENST00000559276 TOMM6Q96B49 74 aa4.29□□□□□ -1.72
USP3-212ENST00000559276 C18orf15Q96N68 181 aa4.29□□□□□ -1.72
USP3-212ENST00000559276 HIST1H4GQ99525 98 aa4.29□□□□□ -1.72
USP3-212ENST00000559276 SMIM2Q9BVW6 85 aa4.29□□□□□ -1.72
USP3-212ENST00000559276 C1QTNF4Q9BXJ3 329 aa4.29□□□□□ -1.72
USP3-212ENST00000559276 SPANXA1Q9NS26 97 aa4.29□□□□□ -1.72
USP3-212ENST00000559276 MRPL16Q9NX20 251 aaKnown RBP4.29□□□□□ -1.72
USP3-212ENST00000559276 MRPL35Q9NZE8 188 aaKnown RBP4.29□□□□□ -1.72
USP3-212ENST00000559276 PRO0461Q9UI25 63 aa4.29□□□□□ -1.72
USP3-212ENST00000559276 TRBV7-1A0A0A6YYK4 115 aa4.28□□□□□ -1.72
USP3-212ENST00000559276 IGHV3-35A0A0C4DH35 117 aa4.28□□□□□ -1.72
USP3-212ENST00000559276 TMEM262E9PQX1 116 aa4.28□□□□□ -1.72
USP3-212ENST00000559276 SMKR1H3BMG3 65 aa4.28□□□□□ -1.72
USP3-212ENST00000559276 BUB3O43684 328 aa4.28□□□□□ -1.72
USP3-212ENST00000559276 LY6G6CO95867 125 aa4.28□□□□□ -1.72
USP3-212ENST00000559276 UBE2D1P51668 147 aa4.28□□□□□ -1.72
USP3-212ENST00000559276 HERVK_113P61574 105 aa4.28□□□□□ -1.72
USP3-212ENST00000559276 ODF3L2Q3SX64 289 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms