RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 MPV17L2Q567V2 206 aa10.18□□□□□ -0.78
TPM1-211ENST00000558314 CLPSL2Q6UWE3 100 aa10.18□□□□□ -0.78
TPM1-211ENST00000558314 Q6ZSA8 131 aa10.18□□□□□ -0.78
TPM1-211ENST00000558314 TMUB2Q71RG4 321 aa10.18□□□□□ -0.78
TPM1-211ENST00000558314 AKAP14Q86UN6 197 aa10.18□□□□□ -0.78
TPM1-211ENST00000558314 EIF5AP63241 154 aaKnown RBP10.17□□□□□ -0.78
TPM1-211ENST00000558314 ENHOQ6UWT2 76 aa10.17□□□□□ -0.78
TPM1-211ENST00000558314 OR10G8Q8NGN5 311 aa10.17□□□□□ -0.78
TPM1-211ENST00000558314 GNG13Q9P2W3 67 aa10.17□□□□□ -0.78
TPM1-211ENST00000558314 DNAH8Q96JB1 4490 aa10.16□□□□□ -0.78
TPM1-211ENST00000558314 GZMBP10144 247 aa10.16□□□□□ -0.78
TPM1-211ENST00000558314 GAGE6Q13070 117 aa10.16□□□□□ -0.78
TPM1-211ENST00000558314 DERL1Q9BUN8 251 aa10.16□□□□□ -0.78
TPM1-211ENST00000558314 MLST8Q9BVC4 326 aa10.16□□□□□ -0.78
TPM1-211ENST00000558314 hCG_2014768A0A024R1R8 64 aa10.15□□□□□ -0.78
TPM1-211ENST00000558314 SNAI2O43623 268 aa10.15□□□□□ -0.78
TPM1-211ENST00000558314 RPL35P42766 123 aaKnown RBP10.15□□□□□ -0.78
TPM1-211ENST00000558314 C14orf177Q52M58 125 aa10.15□□□□□ -0.78
TPM1-211ENST00000558314 DAZAP1Q96EP5 407 aaKnown RBP10.15□□□□□ -0.78
TPM1-211ENST00000558314 AP1S3Q96PC3 154 aa10.15□□□□□ -0.78
TPM1-211ENST00000558314 CHAC1Q9BUX1 264 aa10.15□□□□□ -0.78
TPM1-211ENST00000558314 USP17L23D6RBM5 183 aa10.14□□□□□ -0.79
TPM1-211ENST00000558314 IGLV2-8P01709 118 aa10.14□□□□□ -0.79
TPM1-211ENST00000558314 CXCL1P09341 107 aa10.14□□□□□ -0.79
TPM1-211ENST00000558314 OR5AL1P0C617 328 aa10.14□□□□□ -0.79
TPM1-211ENST00000558314 CCL20P78556 96 aa10.14□□□□□ -0.79
TPM1-211ENST00000558314 ATRAIDQ6UW56 229 aa10.14□□□□□ -0.79
TPM1-211ENST00000558314 DEFB104AQ8WTQ1 72 aa10.14□□□□□ -0.79
TPM1-211ENST00000558314 CENPWQ5EE01 88 aa10.13□□□□□ -0.79
TPM1-211ENST00000558314 OR2D3Q8NGH3 330 aa10.13□□□□□ -0.79
TPM1-211ENST00000558314 CIRBP-AS1Q8TBR5 109 aa10.13□□□□□ -0.79
TPM1-211ENST00000558314 PKIAP61925 76 aa10.12□□□□□ -0.79
TPM1-211ENST00000558314 RBX1P62877 108 aa10.12□□□□□ -0.79
TPM1-211ENST00000558314 NTM-AS1Q6ZSK4 140 aa10.12□□□□□ -0.79
TPM1-211ENST00000558314 SSBP4Q9BWG4 385 aaPredicted RBP10.12□□□□□ -0.79
TPM1-211ENST00000558314 MANBALQ9NQG1 85 aa10.12□□□□□ -0.79
TPM1-211ENST00000558314 TRBV25-1A0A075B6N4 114 aa10.11□□□□□ -0.79
TPM1-211ENST00000558314 RAB19A4D1S5 217 aa10.11□□□□□ -0.79
TPM1-211ENST00000558314 TMEM97Q5BJF2 176 aa10.11□□□□□ -0.79
TPM1-211ENST00000558314 EIF5AL1Q6IS14 154 aaKnown RBP10.11□□□□□ -0.79
TPM1-211ENST00000558314 LINC00269Q8N2A0 174 aa10.11□□□□□ -0.79
TPM1-211ENST00000558314 FER1L6-AS1Q8NA97 138 aa10.11□□□□□ -0.79
TPM1-211ENST00000558314 IGLV10-54A0A075B6I4 117 aa10.1□□□□□ -0.79
TPM1-211ENST00000558314 MIAQ16674 131 aa10.1□□□□□ -0.79
TPM1-211ENST00000558314 KIF25-AS1Q9Y6Z4 181 aa10.1□□□□□ -0.79
TPM1-211ENST00000558314 IGHV1-24A0A0C4DH33 117 aa10.09□□□□□ -0.79
TPM1-211ENST00000558314 GNG4P50150 75 aa10.09□□□□□ -0.79
TPM1-211ENST00000558314 NKX2-5P52952 324 aaPredicted RBP10.09□□□□□ -0.79
TPM1-211ENST00000558314 SUMO4Q6EEV6 95 aa10.09□□□□□ -0.79
TPM1-211ENST00000558314 TEX46H3BTG2 121 aa10.08□□□□□ -0.8
TPM1-211ENST00000558314 H7C1H1 209 aa10.08□□□□□ -0.8
TPM1-211ENST00000558314 P01737 135 aa10.08□□□□□ -0.8
TPM1-211ENST00000558314 PRSS1P07477 247 aa10.08□□□□□ -0.8
TPM1-211ENST00000558314 RAB5CP51148 216 aa10.08□□□□□ -0.8
TPM1-211ENST00000558314 RPS20P60866 119 aaKnown RBP10.08□□□□□ -0.8
TPM1-211ENST00000558314 C11orf52Q96A22 123 aa10.08□□□□□ -0.8
TPM1-211ENST00000558314 MED9Q9NWA0 146 aa10.08□□□□□ -0.8
TPM1-211ENST00000558314 VAX2Q9UIW0 290 aa10.08□□□□□ -0.8
TPM1-211ENST00000558314 KRTAP29-1A8MX34 341 aaPredicted RBP10.07□□□□□ -0.8
TPM1-211ENST00000558314 CACNG7P62955 275 aa10.07□□□□□ -0.8
TPM1-211ENST00000558314 XKRY2A2RUG3 117 aa10.06□□□□□ -0.8
TPM1-211ENST00000558314 M0QY20 66 aa10.06□□□□□ -0.8
TPM1-211ENST00000558314 IFNA1P01562 189 aa10.06□□□□□ -0.8
TPM1-211ENST00000558314 IGLC6P0CF74 106 aa10.06□□□□□ -0.8
TPM1-211ENST00000558314 RPL37AP61513 92 aaKnown RBP10.06□□□□□ -0.8
TPM1-211ENST00000558314 REG3AQ06141 175 aa10.06□□□□□ -0.8
TPM1-211ENST00000558314 LYZL1Q6UWQ5 148 aa10.06□□□□□ -0.8
TPM1-211ENST00000558314 SLC51BQ86UW2 128 aa10.06□□□□□ -0.8
TPM1-211ENST00000558314 UBE2L6O14933 153 aa10.05□□□□□ -0.8
TPM1-211ENST00000558314 IQCJQ1A5X6 159 aa10.05□□□□□ -0.8
TPM1-211ENST00000558314 RASL11AQ6T310 242 aa10.05□□□□□ -0.8
TPM1-211ENST00000558314 TMEM243Q9BU79 118 aa10.05□□□□□ -0.8
TPM1-211ENST00000558314 IGKV3OR2-268A0A0C4DH90 116 aa10.04□□□□□ -0.8
TPM1-211ENST00000558314 A0A1B0GVG6 124 aa10.04□□□□□ -0.8
TPM1-211ENST00000558314 hDV102S1A0JD36 115 aa10.04□□□□□ -0.8
TPM1-211ENST00000558314 C19orf71A6NCJ1 209 aa10.04□□□□□ -0.8
TPM1-211ENST00000558314 TRGC1P0CF51 173 aa10.04□□□□□ -0.8
TPM1-211ENST00000558314 MEF2BQ02080 365 aaPredicted RBP10.04□□□□□ -0.8
TPM1-211ENST00000558314 DPH3Q96FX2 82 aa10.04□□□□□ -0.8
TPM1-211ENST00000558314 PRR34Q9NV39 138 aa10.04□□□□□ -0.8
TPM1-211ENST00000558314 IGLV4-60A0A075B6I1 120 aa10.03□□□□□ -0.8
TPM1-211ENST00000558314 TRAV1-1A0A0B4J248 108 aa10.03□□□□□ -0.8
TPM1-211ENST00000558314 PDE6DO43924 150 aa10.03□□□□□ -0.8
TPM1-211ENST00000558314 NTF3P20783 257 aa10.03□□□□□ -0.8
TPM1-211ENST00000558314 DGAT2L7PQ6IED9 249 aa10.03□□□□□ -0.8
TPM1-211ENST00000558314 DPH3P1Q9H4G8 78 aa10.03□□□□□ -0.8
TPM1-211ENST00000558314 F2Z2F3 143 aa10.02□□□□□ -0.81
TPM1-211ENST00000558314 BCL2P10415 239 aa10.02□□□□□ -0.81
TPM1-211ENST00000558314 AMTP48728 403 aa10.02□□□□□ -0.81
TPM1-211ENST00000558314 SULT1A2P50226 295 aa10.02□□□□□ -0.81
TPM1-211ENST00000558314 KRTAP10-4P60372 401 aaPredicted RBP10.02□□□□□ -0.81
TPM1-211ENST00000558314 TWIST1Q15672 202 aa10.02□□□□□ -0.81
TPM1-211ENST00000558314 C9orf62Q8N4C0 152 aa10.02□□□□□ -0.81
TPM1-211ENST00000558314 C9orf163Q8N9P6 203 aa10.02□□□□□ -0.81
TPM1-211ENST00000558314 C20orf203Q8NBC4 194 aa10.02□□□□□ -0.81
TPM1-211ENST00000558314 GFRA4Q9GZZ7 299 aa10.02□□□□□ -0.81
TPM1-211ENST00000558314 BIN3Q9NQY0 253 aa10.02□□□□□ -0.81
TPM1-211ENST00000558314 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.02□□□□□ -0.81
TPM1-211ENST00000558314 TRBV20OR9-2A0A075B6H5 130 aa10.01□□□□□ -0.81
TPM1-211ENST00000558314 COTL1Q14019 142 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms