RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 PRSS3P2Q8NHM4 247 aa6.52□□□□□ -1.37
ACTN1-218ENST00000556343 NXT2Q9NPJ8 142 aaKnown RBP6.52□□□□□ -1.37
ACTN1-218ENST00000556343 TRBV7-3A0A075B6L6 115 aa6.51□□□□□ -1.37
ACTN1-218ENST00000556343 DEFB131BA0A096LNP1 70 aa6.51□□□□□ -1.37
ACTN1-218ENST00000556343 G0S2P27469 103 aa6.51□□□□□ -1.37
ACTN1-218ENST00000556343 CRYBA4P53673 196 aa6.51□□□□□ -1.37
ACTN1-218ENST00000556343 SUMO2P61956 95 aaKnown RBP6.51□□□□□ -1.37
ACTN1-218ENST00000556343 RPL32P62910 135 aaKnown RBP6.51□□□□□ -1.37
ACTN1-218ENST00000556343 Q0VG73 95 aa6.51□□□□□ -1.37
ACTN1-218ENST00000556343 TMEM97Q5BJF2 176 aa6.51□□□□□ -1.37
ACTN1-218ENST00000556343 Q6ZTC4 211 aa6.51□□□□□ -1.37
ACTN1-218ENST00000556343 FA2HQ7L5A8 372 aa6.51□□□□□ -1.37
ACTN1-218ENST00000556343 DAZ4Q86SG3 579 aaKnown RBP6.51□□□□□ -1.37
ACTN1-218ENST00000556343 KIR2DL4Q99706 377 aa6.51□□□□□ -1.37
ACTN1-218ENST00000556343 DAZ3Q9NR90 486 aaKnown RBP6.51□□□□□ -1.37
ACTN1-218ENST00000556343 LOC389332A0A1B0GUA5 103 aa6.5□□□□□ -1.37
ACTN1-218ENST00000556343 PRSS47A8MTI9 375 aa6.5□□□□□ -1.37
ACTN1-218ENST00000556343 H3BNG1 76 aa6.5□□□□□ -1.37
ACTN1-218ENST00000556343 NPYP01303 97 aa6.5□□□□□ -1.37
ACTN1-218ENST00000556343 MRPL23Q16540 153 aaKnown RBP6.5□□□□□ -1.37
ACTN1-218ENST00000556343 Q6ZSN1 163 aa6.5□□□□□ -1.37
ACTN1-218ENST00000556343 NRACQ8N912 160 aa6.5□□□□□ -1.37
ACTN1-218ENST00000556343 NEXN-AS1Q8NBZ9 246 aa6.5□□□□□ -1.37
ACTN1-218ENST00000556343 ZNRF2Q8NHG8 242 aa6.5□□□□□ -1.37
ACTN1-218ENST00000556343 RPL39LQ96EH5 51 aaKnown RBP6.5□□□□□ -1.37
ACTN1-218ENST00000556343 DNAH9Q9NYC9 4486 aa6.5□□□□□ -1.37
ACTN1-218ENST00000556343 HUWE1Q7Z6Z7 4374 aaKnown RBP6.49□□□□□ -1.37
ACTN1-218ENST00000556343 TRAV26-1A0A087WT03 109 aa6.49□□□□□ -1.37
ACTN1-218ENST00000556343 GAGE12JA6NER3 117 aa6.49□□□□□ -1.37
ACTN1-218ENST00000556343 SDHAF1A6NFY7 115 aa6.49□□□□□ -1.37
ACTN1-218ENST00000556343 I3L3M4 83 aa6.49□□□□□ -1.37
ACTN1-218ENST00000556343 K7EMI3 77 aa6.49□□□□□ -1.37
ACTN1-218ENST00000556343 HIST1H2BKO60814 126 aa6.49□□□□□ -1.37
ACTN1-218ENST00000556343 HIST1H2BJP06899 126 aa6.49□□□□□ -1.37
ACTN1-218ENST00000556343 LINC00614P0C842 121 aa6.49□□□□□ -1.37
ACTN1-218ENST00000556343 GYPEP15421 78 aa6.49□□□□□ -1.37
ACTN1-218ENST00000556343 HOXA5P20719 270 aa6.49□□□□□ -1.37
ACTN1-218ENST00000556343 HIST1H2BOP23527 126 aa6.49□□□□□ -1.37
ACTN1-218ENST00000556343 FCER1GP30273 86 aa6.49□□□□□ -1.37
ACTN1-218ENST00000556343 HIST1H2BBP33778 126 aa6.49□□□□□ -1.37
ACTN1-218ENST00000556343 NDUFA6P56556 154 aa6.49□□□□□ -1.37
ACTN1-218ENST00000556343 HIST1H2BDP58876 126 aa6.49□□□□□ -1.37
ACTN1-218ENST00000556343 HIST1H2BCP62807 126 aa6.49□□□□□ -1.37
ACTN1-218ENST00000556343 GAGE1Q13065 139 aa6.49□□□□□ -1.37
ACTN1-218ENST00000556343 GAGE4Q13068 117 aa6.49□□□□□ -1.37
ACTN1-218ENST00000556343 GAGE5Q13069 117 aa6.49□□□□□ -1.37
ACTN1-218ENST00000556343 HIST2H2BEQ16778 126 aa6.49□□□□□ -1.37
ACTN1-218ENST00000556343 GAGE13Q4V321 117 aa6.49□□□□□ -1.37
ACTN1-218ENST00000556343 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.49□□□□□ -1.37
ACTN1-218ENST00000556343 Q8N8P6 123 aa6.49□□□□□ -1.37
ACTN1-218ENST00000556343 C18orf32Q8TCD1 76 aa6.49□□□□□ -1.37
ACTN1-218ENST00000556343 HIST1H2BHQ93079 126 aa6.49□□□□□ -1.37
ACTN1-218ENST00000556343 CHCHD1Q96BP2 118 aaKnown RBP6.49□□□□□ -1.37
ACTN1-218ENST00000556343 HIST1H2BNQ99877 126 aa6.49□□□□□ -1.37
ACTN1-218ENST00000556343 HIST1H2BMQ99879 126 aa6.49□□□□□ -1.37
ACTN1-218ENST00000556343 SMIM2Q9BVW6 85 aa6.49□□□□□ -1.37
ACTN1-218ENST00000556343 ICOSQ9Y6W8 199 aa6.49□□□□□ -1.37
ACTN1-218ENST00000556343 MEGF8Q7Z7M0 2845 aa6.48□□□□□ -1.37
ACTN1-218ENST00000556343 A0A0J9YY99 117 aa6.48□□□□□ -1.37
ACTN1-218ENST00000556343 TRBV27A0A0K0K1C4 114 aa6.48□□□□□ -1.37
ACTN1-218ENST00000556343 POLR2KP53803 58 aaKnown RBP6.48□□□□□ -1.37
ACTN1-218ENST00000556343 COTL1Q14019 142 aa6.48□□□□□ -1.37
ACTN1-218ENST00000556343 ORMDL2Q53FV1 153 aa6.48□□□□□ -1.37
ACTN1-218ENST00000556343 NIT1Q86X76 327 aa6.48□□□□□ -1.37
ACTN1-218ENST00000556343 C15orf53Q8NAA6 179 aa6.48□□□□□ -1.37
ACTN1-218ENST00000556343 PHLDA1Q8WV24 401 aaPredicted RBP6.48□□□□□ -1.37
ACTN1-218ENST00000556343 TMEM70Q9BUB7 260 aa6.48□□□□□ -1.37
ACTN1-218ENST00000556343 LINC01549A6NIU2 74 aa6.47□□□□□ -1.37
ACTN1-218ENST00000556343 HSBP1O75506 76 aa6.47□□□□□ -1.37
ACTN1-218ENST00000556343 P0DMU3 169 aa6.47□□□□□ -1.37
ACTN1-218ENST00000556343 FAM231AP0DMU4 169 aa6.47□□□□□ -1.37
ACTN1-218ENST00000556343 FAM231CP0DMU5 169 aa6.47□□□□□ -1.37
ACTN1-218ENST00000556343 IFI27P40305 119 aaPredicted RBP6.47□□□□□ -1.37
ACTN1-218ENST00000556343 UBE2D3P61077 147 aa6.47□□□□□ -1.37
ACTN1-218ENST00000556343 UBE2D2P62837 147 aa6.47□□□□□ -1.37
ACTN1-218ENST00000556343 SMAGPQ0VAQ4 97 aa6.47□□□□□ -1.37
ACTN1-218ENST00000556343 LAGE3Q14657 143 aa6.47□□□□□ -1.37
ACTN1-218ENST00000556343 RNASEKQ6P5S7 137 aaKnown RBP6.47□□□□□ -1.37
ACTN1-218ENST00000556343 ATP6V0E2Q8NHE4 81 aa6.47□□□□□ -1.37
ACTN1-218ENST00000556343 TMEM18Q96B42 140 aa6.47□□□□□ -1.37
ACTN1-218ENST00000556343 AP5S1Q9NUS5 200 aa6.47□□□□□ -1.37
ACTN1-218ENST00000556343 KLK5Q9Y337 293 aaPredicted RBP6.47□□□□□ -1.37
ACTN1-218ENST00000556343 GAS8-AS1O95177 125 aa6.46□□□□□ -1.38
ACTN1-218ENST00000556343 NUDT3O95989 172 aa6.46□□□□□ -1.38
ACTN1-218ENST00000556343 IQCJQ1A5X6 159 aa6.46□□□□□ -1.38
ACTN1-218ENST00000556343 NEGR1Q7Z3B1 354 aa6.46□□□□□ -1.38
ACTN1-218ENST00000556343 VSIG2Q96IQ7 327 aa6.46□□□□□ -1.38
ACTN1-218ENST00000556343 GTSF1LQ9H1H1 148 aa6.46□□□□□ -1.38
ACTN1-218ENST00000556343 TMA7Q9Y2S6 64 aaKnown RBP6.46□□□□□ -1.38
ACTN1-218ENST00000556343 NUPR2A6NF83 97 aa6.45□□□□□ -1.38
ACTN1-218ENST00000556343 S100A2P29034 98 aa6.45□□□□□ -1.38
ACTN1-218ENST00000556343 TCTAP57738 103 aa6.45□□□□□ -1.38
ACTN1-218ENST00000556343 PKIAP61925 76 aa6.45□□□□□ -1.38
ACTN1-218ENST00000556343 COA6Q5JTJ3 125 aaKnown RBP6.45□□□□□ -1.38
ACTN1-218ENST00000556343 PRKDCP78527 4128 aaKnown RBP6.45□□□□□ -1.38
ACTN1-218ENST00000556343 IGLV2-18A0A075B6J9 118 aa6.44□□□□□ -1.38
ACTN1-218ENST00000556343 IGHV1-24A0A0C4DH33 117 aa6.44□□□□□ -1.38
ACTN1-218ENST00000556343 LOC100131303A0A0U1RQF7 123 aa6.44□□□□□ -1.38
ACTN1-218ENST00000556343 IGLL5B9A064 214 aa6.44□□□□□ -1.38
ACTN1-218ENST00000556343 UBE2L6O14933 153 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 116.8 ms