RNA–Protein interactions for RNA: ENST00000553999.5

HIF1A-206, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 4

Gene HIF1A, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-206ENST00000553999 RNASE7Q9H1E1 156 aaKnown RBP13.73□□□□□ -0.21
HIF1A-206ENST00000553999 KIF25-AS1Q9Y6Z4 181 aa13.73□□□□□ -0.21
HIF1A-206ENST00000553999 IGKV2D-24A0A075B6R9 120 aa13.72□□□□□ -0.21
HIF1A-206ENST00000553999 GCSHP23434 173 aa13.72□□□□□ -0.21
HIF1A-206ENST00000553999 KCNIP4Q6PIL6 250 aa13.72□□□□□ -0.21
HIF1A-206ENST00000553999 NUDT10Q8NFP7 164 aa13.72□□□□□ -0.21
HIF1A-206ENST00000553999 OR10G8Q8NGN5 311 aa13.72□□□□□ -0.21
HIF1A-206ENST00000553999 BAALCQ8WXS3 180 aa13.72□□□□□ -0.21
HIF1A-206ENST00000553999 NUDT11Q96G61 164 aa13.72□□□□□ -0.21
HIF1A-206ENST00000553999 TM2D2Q9BX73 214 aa13.72□□□□□ -0.21
HIF1A-206ENST00000553999 DNAH5Q8TE73 4624 aa13.71□□□□□ -0.21
HIF1A-206ENST00000553999 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.71□□□□□ -0.21
HIF1A-206ENST00000553999 TRAV8-3A0A0A6YYJ7 113 aa13.71□□□□□ -0.21
HIF1A-206ENST00000553999 K7EN84 100 aa13.71□□□□□ -0.21
HIF1A-206ENST00000553999 Q8N1X5 172 aa13.71□□□□□ -0.21
HIF1A-206ENST00000553999 CHCHD5Q9BSY4 110 aa13.71□□□□□ -0.21
HIF1A-206ENST00000553999 APOBP04114 4563 aaKnown RBP13.7□□□□□ -0.22
HIF1A-206ENST00000553999 TRBV6-8A0A0A6YYG3 113 aa13.7□□□□□ -0.22
HIF1A-206ENST00000553999 BLOC1S1P78537 153 aa13.7□□□□□ -0.22
HIF1A-206ENST00000553999 TOR2AQ5JU69 321 aa13.7□□□□□ -0.22
HIF1A-206ENST00000553999 SUMO4Q6EEV6 95 aa13.7□□□□□ -0.22
HIF1A-206ENST00000553999 C15orf54Q8N8G6 183 aa13.7□□□□□ -0.22
HIF1A-206ENST00000553999 OCC1Q8TAD7 63 aa13.7□□□□□ -0.22
HIF1A-206ENST00000553999 SMIM12Q96EX1 92 aa13.7□□□□□ -0.22
HIF1A-206ENST00000553999 XKRY2A2RUG3 117 aa13.69□□□□□ -0.22
HIF1A-206ENST00000553999 CACNG7P62955 275 aa13.69□□□□□ -0.22
HIF1A-206ENST00000553999 MPV17L2Q567V2 206 aa13.69□□□□□ -0.22
HIF1A-206ENST00000553999 TAGLN2P37802 199 aaKnown RBP13.68□□□□□ -0.22
HIF1A-206ENST00000553999 XGP55808 180 aa13.68□□□□□ -0.22
HIF1A-206ENST00000553999 CLPSL2Q6UWE3 100 aa13.68□□□□□ -0.22
HIF1A-206ENST00000553999 RPP21Q9H633 154 aaKnown RBP13.68□□□□□ -0.22
HIF1A-206ENST00000553999 BIN3Q9NQY0 253 aa13.68□□□□□ -0.22
HIF1A-206ENST00000553999 ABCA13Q86UQ4 5058 aa13.67□□□□□ -0.22
HIF1A-206ENST00000553999 NTF3P20783 257 aa13.67□□□□□ -0.22
HIF1A-206ENST00000553999 GAGE6Q13070 117 aa13.67□□□□□ -0.22
HIF1A-206ENST00000553999 NTM-AS1Q6ZSK4 140 aa13.67□□□□□ -0.22
HIF1A-206ENST00000553999 Q8N976 141 aa13.67□□□□□ -0.22
HIF1A-206ENST00000553999 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.67□□□□□ -0.22
HIF1A-206ENST00000553999 SMR3BP02814 79 aaPredicted RBP13.66□□□□□ -0.22
HIF1A-206ENST00000553999 ANGP03950 147 aaKnown RBP13.66□□□□□ -0.22
HIF1A-206ENST00000553999 M0QY20 66 aa13.65□□□□□ -0.22
HIF1A-206ENST00000553999 TWIST1Q15672 202 aa13.65□□□□□ -0.22
HIF1A-206ENST00000553999 LINC01620Q4KN68 170 aa13.65□□□□□ -0.22
HIF1A-206ENST00000553999 RMI2Q96E14 147 aa13.65□□□□□ -0.22
HIF1A-206ENST00000553999 EIF5A2Q9GZV4 153 aaKnown RBP13.65□□□□□ -0.22
HIF1A-206ENST00000553999 F2Z2F3 143 aa13.64□□□□□ -0.23
HIF1A-206ENST00000553999 CRPP02741 224 aa13.64□□□□□ -0.23
HIF1A-206ENST00000553999 TRGC1P0CF51 173 aa13.64□□□□□ -0.23
HIF1A-206ENST00000553999 NTN5Q8WTR8 489 aaPredicted RBP13.64□□□□□ -0.23
HIF1A-206ENST00000553999 TRAV26-2A0A0B4J265 109 aa13.63□□□□□ -0.23
HIF1A-206ENST00000553999 CTRLP40313 264 aa13.63□□□□□ -0.23
HIF1A-206ENST00000553999 ELOBQ15370 118 aa13.63□□□□□ -0.23
HIF1A-206ENST00000553999 ATRAIDQ6UW56 229 aa13.63□□□□□ -0.23
HIF1A-206ENST00000553999 DPH3P1Q9H4G8 78 aa13.63□□□□□ -0.23
HIF1A-206ENST00000553999 H7C1H1 209 aa13.62□□□□□ -0.23
HIF1A-206ENST00000553999 GATCO43716 136 aaKnown RBP13.62□□□□□ -0.23
HIF1A-206ENST00000553999 ENHOQ6UWT2 76 aa13.62□□□□□ -0.23
HIF1A-206ENST00000553999 GTSF1Q8WW33 167 aa13.62□□□□□ -0.23
HIF1A-206ENST00000553999 EPM2AB3EWF7 344 aa13.61□□□□□ -0.23
HIF1A-206ENST00000553999 TMEM250H0YL14 139 aa13.61□□□□□ -0.23
HIF1A-206ENST00000553999 HLA-DQA1P01909 254 aa13.61□□□□□ -0.23
HIF1A-206ENST00000553999 FOXA3P55318 350 aaPredicted RBP13.61□□□□□ -0.23
HIF1A-206ENST00000553999 RASL11AQ6T310 242 aa13.61□□□□□ -0.23
HIF1A-206ENST00000553999 PGLYRP4Q96LB8 373 aa13.61□□□□□ -0.23
HIF1A-206ENST00000553999 CHCHD7Q9BUK0 85 aa13.61□□□□□ -0.23
HIF1A-206ENST00000553999 FAM30AQ9NZY2 134 aa13.61□□□□□ -0.23
HIF1A-206ENST00000553999 TRBV25-1A0A075B6N4 114 aa13.6□□□□□ -0.23
HIF1A-206ENST00000553999 LYPD6BQ8NI32 183 aa13.6□□□□□ -0.23
HIF1A-206ENST00000553999 SMIM7Q9BQ49 75 aa13.6□□□□□ -0.23
HIF1A-206ENST00000553999 C1orf43Q9BWL3 253 aa13.6□□□□□ -0.23
HIF1A-206ENST00000553999 IGHV1-24A0A0C4DH33 117 aa13.59□□□□□ -0.23
HIF1A-206ENST00000553999 RBX1P62877 108 aa13.59□□□□□ -0.23
HIF1A-206ENST00000553999 Q5VSD8 79 aa13.59□□□□□ -0.23
HIF1A-206ENST00000553999 COX11Q9Y6N1 276 aa13.59□□□□□ -0.23
HIF1A-206ENST00000553999 Q0VG73 95 aa13.57□□□□□ -0.24
HIF1A-206ENST00000553999 TMEM97Q5BJF2 176 aa13.57□□□□□ -0.24
HIF1A-206ENST00000553999 LINC00269Q8N2A0 174 aa13.57□□□□□ -0.24
HIF1A-206ENST00000553999 RPL39LQ96EH5 51 aaKnown RBP13.57□□□□□ -0.24
HIF1A-206ENST00000553999 FAM210AQ96ND0 272 aa13.57□□□□□ -0.24
HIF1A-206ENST00000553999 ZNF727A8MUV8 499 aa13.56□□□□□ -0.24
HIF1A-206ENST00000553999 GATD1Q8NB37 220 aa13.56□□□□□ -0.24
HIF1A-206ENST00000553999 NIT2Q9NQR4 276 aa13.56□□□□□ -0.24
HIF1A-206ENST00000553999 IGLV10-54A0A075B6I4 117 aa13.55□□□□□ -0.24
HIF1A-206ENST00000553999 SRP19P09132 144 aaKnown RBP13.55□□□□□ -0.24
HIF1A-206ENST00000553999 IQCJQ1A5X6 159 aa13.55□□□□□ -0.24
HIF1A-206ENST00000553999 FRZBQ92765 325 aa13.55□□□□□ -0.24
HIF1A-206ENST00000553999 TMEM243Q9BU79 118 aa13.55□□□□□ -0.24
HIF1A-206ENST00000553999 AMTP48728 403 aa13.54□□□□□ -0.24
HIF1A-206ENST00000553999 PKIAP61925 76 aa13.54□□□□□ -0.24
HIF1A-206ENST00000553999 LINC01551Q86U37 167 aa13.54□□□□□ -0.24
HIF1A-206ENST00000553999 TMEM70Q9BUB7 260 aa13.54□□□□□ -0.24
HIF1A-206ENST00000553999 CNFNQ9BYD5 112 aa13.54□□□□□ -0.24
HIF1A-206ENST00000553999 A8MWL6 223 aa13.53□□□□□ -0.24
HIF1A-206ENST00000553999 WDR73Q6P4I2 378 aa13.53□□□□□ -0.24
HIF1A-206ENST00000553999 FAM231DQ6ZW35 169 aa13.53□□□□□ -0.24
HIF1A-206ENST00000553999 SMIM15Q7Z3B0 74 aa13.53□□□□□ -0.24
HIF1A-206ENST00000553999 IGLV4-60A0A075B6I1 120 aa13.52□□□□□ -0.25
HIF1A-206ENST00000553999 USP17L23D6RBM5 183 aa13.52□□□□□ -0.25
HIF1A-206ENST00000553999 COTL1Q14019 142 aa13.52□□□□□ -0.25
HIF1A-206ENST00000553999 GFRA4Q9GZZ7 299 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms