RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 HIST1H2BBP33778 126 aa8.02□□□□□ -1.13
CKAP4-202ENST00000552828 HIST1H2BDP58876 126 aa8.02□□□□□ -1.13
CKAP4-202ENST00000552828 RPS20P60866 119 aaKnown RBP8.02□□□□□ -1.13
CKAP4-202ENST00000552828 HIST1H2BCP62807 126 aa8.02□□□□□ -1.13
CKAP4-202ENST00000552828 RPL23P62829 140 aaKnown RBP8.02□□□□□ -1.13
CKAP4-202ENST00000552828 HIST2H2BEQ16778 126 aa8.02□□□□□ -1.13
CKAP4-202ENST00000552828 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.02□□□□□ -1.13
CKAP4-202ENST00000552828 DMRTA1Q5VZB9 504 aa8.02□□□□□ -1.13
CKAP4-202ENST00000552828 NEGR1Q7Z3B1 354 aa8.02□□□□□ -1.13
CKAP4-202ENST00000552828 OCC1Q8TAD7 63 aa8.02□□□□□ -1.13
CKAP4-202ENST00000552828 HIST1H2BHQ93079 126 aa8.02□□□□□ -1.13
CKAP4-202ENST00000552828 HIST1H2BNQ99877 126 aa8.02□□□□□ -1.13
CKAP4-202ENST00000552828 HIST1H2BMQ99879 126 aa8.02□□□□□ -1.13
CKAP4-202ENST00000552828 DNAH8Q96JB1 4490 aa8.01□□□□□ -1.13
CKAP4-202ENST00000552828 XKRY2A2RUG3 117 aa8.01□□□□□ -1.13
CKAP4-202ENST00000552828 M0R381 172 aa8.01□□□□□ -1.13
CKAP4-202ENST00000552828 PPP1R2P9O14990 202 aa8.01□□□□□ -1.13
CKAP4-202ENST00000552828 DNAH10OSP0CZ25 163 aa8.01□□□□□ -1.13
CKAP4-202ENST00000552828 S100A2P29034 98 aa8.01□□□□□ -1.13
CKAP4-202ENST00000552828 NDUFA6P56556 154 aa8.01□□□□□ -1.13
CKAP4-202ENST00000552828 ADIRFQ15847 76 aa8.01□□□□□ -1.13
CKAP4-202ENST00000552828 OR2D3Q8NGH3 330 aa8.01□□□□□ -1.13
CKAP4-202ENST00000552828 FRZBQ92765 325 aa8.01□□□□□ -1.13
CKAP4-202ENST00000552828 IMMP2LQ96T52 175 aa8.01□□□□□ -1.13
CKAP4-202ENST00000552828 MSRB1Q9NZV6 116 aa8.01□□□□□ -1.13
CKAP4-202ENST00000552828 LY96Q9Y6Y9 160 aa8.01□□□□□ -1.13
CKAP4-202ENST00000552828 URGCP-MRPS24S4R325 110 aa8.01□□□□□ -1.13
CKAP4-202ENST00000552828 TRGC2P03986 189 aa8□□□□□ -1.13
CKAP4-202ENST00000552828 OR5AL1P0C617 328 aa8□□□□□ -1.13
CKAP4-202ENST00000552828 GATA1P15976 413 aaPredicted RBP8□□□□□ -1.13
CKAP4-202ENST00000552828 COA6Q5JTJ3 125 aaKnown RBP8□□□□□ -1.13
CKAP4-202ENST00000552828 ZFP2Q6ZN57 461 aa8□□□□□ -1.13
CKAP4-202ENST00000552828 NUDT10Q8NFP7 164 aa8□□□□□ -1.13
CKAP4-202ENST00000552828 NUDT11Q96G61 164 aa8□□□□□ -1.13
CKAP4-202ENST00000552828 SSBP4Q9BWG4 385 aaPredicted RBP8□□□□□ -1.13
CKAP4-202ENST00000552828 NIT2Q9NQR4 276 aa8□□□□□ -1.13
CKAP4-202ENST00000552828 IGHV3-73A0A0B4J1V6 119 aa7.99□□□□□ -1.13
CKAP4-202ENST00000552828 K7EN84 100 aa7.99□□□□□ -1.13
CKAP4-202ENST00000552828 K7EQD1 137 aa7.99□□□□□ -1.13
CKAP4-202ENST00000552828 SNAI2O43623 268 aa7.99□□□□□ -1.13
CKAP4-202ENST00000552828 TRGC1P0CF51 173 aa7.99□□□□□ -1.13
CKAP4-202ENST00000552828 GYPEP15421 78 aa7.99□□□□□ -1.13
CKAP4-202ENST00000552828 EVI2AP22794 236 aa7.99□□□□□ -1.13
CKAP4-202ENST00000552828 GCSHP23434 173 aa7.99□□□□□ -1.13
CKAP4-202ENST00000552828 HIST3H2BBQ8N257 126 aa7.99□□□□□ -1.13
CKAP4-202ENST00000552828 JPT2Q9H910 190 aa7.99□□□□□ -1.13
CKAP4-202ENST00000552828 FLG2Q5D862 2391 aaPredicted RBP7.98□□□□□ -1.13
CKAP4-202ENST00000552828 TRBV6-4A0A1B0GX49 114 aa7.98□□□□□ -1.13
CKAP4-202ENST00000552828 IFITM10A6NMD0 228 aa7.98□□□□□ -1.13
CKAP4-202ENST00000552828 RHODO00212 210 aa7.98□□□□□ -1.13
CKAP4-202ENST00000552828 GZMBP10144 247 aa7.98□□□□□ -1.13
CKAP4-202ENST00000552828 SRIP30626 198 aa7.98□□□□□ -1.13
CKAP4-202ENST00000552828 SPANXN1Q5VSR9 72 aa7.98□□□□□ -1.13
CKAP4-202ENST00000552828 KCNIP4Q6PIL6 250 aa7.98□□□□□ -1.13
CKAP4-202ENST00000552828 WFDC10BQ8IUB3 73 aa7.98□□□□□ -1.13
CKAP4-202ENST00000552828 SLC25A29Q8N8R3 303 aa7.98□□□□□ -1.13
CKAP4-202ENST00000552828 FER1L6-AS1Q8NA97 138 aa7.98□□□□□ -1.13
CKAP4-202ENST00000552828 OR10AG1Q8NH19 301 aa7.98□□□□□ -1.13
CKAP4-202ENST00000552828 SFRP2Q96HF1 295 aa7.98□□□□□ -1.13
CKAP4-202ENST00000552828 PRADC1Q9BSG0 188 aa7.98□□□□□ -1.13
CKAP4-202ENST00000552828 TPPP3Q9BW30 176 aa7.98□□□□□ -1.13
CKAP4-202ENST00000552828 SAMD10Q9BYL1 202 aa7.98□□□□□ -1.13
CKAP4-202ENST00000552828 RNASE7Q9H1E1 156 aaKnown RBP7.98□□□□□ -1.13
CKAP4-202ENST00000552828 RPP21Q9H633 154 aaKnown RBP7.98□□□□□ -1.13
CKAP4-202ENST00000552828 TRAV9-1A0A075B6T8 112 aa7.97□□□□□ -1.13
CKAP4-202ENST00000552828 MUC21A0A0G2JKD1 596 aa7.97□□□□□ -1.13
CKAP4-202ENST00000552828 MUC21A0A140T8X8 626 aa7.97□□□□□ -1.13
CKAP4-202ENST00000552828 F2Z2F3 143 aa7.97□□□□□ -1.13
CKAP4-202ENST00000552828 IGLC6P0CF74 106 aa7.97□□□□□ -1.13
CKAP4-202ENST00000552828 RHOHQ15669 191 aa7.97□□□□□ -1.13
CKAP4-202ENST00000552828 FAM74A4Q5TZK3 123 aa7.97□□□□□ -1.13
CKAP4-202ENST00000552828 FAM231DQ6ZW35 169 aa7.97□□□□□ -1.13
CKAP4-202ENST00000552828 SH2D6Q7Z4S9 175 aa7.97□□□□□ -1.13
CKAP4-202ENST00000552828 LINC01551Q86U37 167 aa7.97□□□□□ -1.13
CKAP4-202ENST00000552828 C10orf126Q8N4M7 172 aa7.97□□□□□ -1.13
CKAP4-202ENST00000552828 A0A087WWL8 130 aa7.96□□□□□ -1.14
CKAP4-202ENST00000552828 GATCO43716 136 aaKnown RBP7.96□□□□□ -1.14
CKAP4-202ENST00000552828 SMR3BP02814 79 aaPredicted RBP7.96□□□□□ -1.14
CKAP4-202ENST00000552828 CRYGDP07320 174 aa7.96□□□□□ -1.14
CKAP4-202ENST00000552828 TIRAPP58753 221 aa7.96□□□□□ -1.14
CKAP4-202ENST00000552828 SSTP61278 116 aa7.96□□□□□ -1.14
CKAP4-202ENST00000552828 CACNG7P62955 275 aa7.96□□□□□ -1.14
CKAP4-202ENST00000552828 UFSP1Q6NVU6 142 aa7.96□□□□□ -1.14
CKAP4-202ENST00000552828 TMEM70Q9BUB7 260 aa7.96□□□□□ -1.14
CKAP4-202ENST00000552828 LOC100131303A0A0U1RQF7 123 aa7.95□□□□□ -1.14
CKAP4-202ENST00000552828 LRCOL1A6NCL2 159 aa7.95□□□□□ -1.14
CKAP4-202ENST00000552828 FAM229AH3BQW9 127 aa7.95□□□□□ -1.14
CKAP4-202ENST00000552828 PYY3Q5JQD4 70 aa7.95□□□□□ -1.14
CKAP4-202ENST00000552828 Q6ZSN1 163 aa7.95□□□□□ -1.14
CKAP4-202ENST00000552828 NTN5Q8WTR8 489 aaPredicted RBP7.95□□□□□ -1.14
CKAP4-202ENST00000552828 A8MWL6 223 aa7.94□□□□□ -1.14
CKAP4-202ENST00000552828 SMIM17P0DL12 118 aa7.94□□□□□ -1.14
CKAP4-202ENST00000552828 CT83Q5H943 113 aa7.94□□□□□ -1.14
CKAP4-202ENST00000552828 WDR73Q6P4I2 378 aa7.94□□□□□ -1.14
CKAP4-202ENST00000552828 LYZL1Q6UWQ5 148 aa7.94□□□□□ -1.14
CKAP4-202ENST00000552828 C14orf178Q8N769 122 aaPredicted RBP7.94□□□□□ -1.14
CKAP4-202ENST00000552828 OR10D4PQ8NGN7 298 aa7.94□□□□□ -1.14
CKAP4-202ENST00000552828 AP1S3Q96PC3 154 aa7.94□□□□□ -1.14
CKAP4-202ENST00000552828 OSTCQ9NRP0 149 aa7.94□□□□□ -1.14
CKAP4-202ENST00000552828 LINC00587B1AMM8 73 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 115.3 ms