RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 M0QY20 66 aa6.5□□□□□ -1.37
HDAC7-229ENST00000549883 LECT2O14960 151 aa6.5□□□□□ -1.37
HDAC7-229ENST00000549883 CDK2AP2O75956 126 aa6.5□□□□□ -1.37
HDAC7-229ENST00000549883 SRP19P09132 144 aaKnown RBP6.5□□□□□ -1.37
HDAC7-229ENST00000549883 CTRLP40313 264 aa6.5□□□□□ -1.37
HDAC7-229ENST00000549883 FOXA3P55318 350 aaPredicted RBP6.5□□□□□ -1.37
HDAC7-229ENST00000549883 EIF5A2Q9GZV4 153 aaKnown RBP6.5□□□□□ -1.37
HDAC7-229ENST00000549883 KLK12Q9UKR0 248 aa6.5□□□□□ -1.37
HDAC7-229ENST00000549883 DNAH5Q8TE73 4624 aa6.5□□□□□ -1.37
HDAC7-229ENST00000549883 TRBV6-8A0A0A6YYG3 113 aa6.49□□□□□ -1.37
HDAC7-229ENST00000549883 C9JQL5 133 aa6.49□□□□□ -1.37
HDAC7-229ENST00000549883 PSCAO43653 123 aa6.49□□□□□ -1.37
HDAC7-229ENST00000549883 SMIM17P0DL12 118 aa6.49□□□□□ -1.37
HDAC7-229ENST00000549883 CACNG7P62955 275 aa6.49□□□□□ -1.37
HDAC7-229ENST00000549883 FAM210AQ96ND0 272 aa6.49□□□□□ -1.37
HDAC7-229ENST00000549883 PGPEP1Q9NXJ5 209 aa6.49□□□□□ -1.37
HDAC7-229ENST00000549883 APOBP04114 4563 aaKnown RBP6.49□□□□□ -1.37
HDAC7-229ENST00000549883 RYR1P21817 5038 aa6.48□□□□□ -1.37
HDAC7-229ENST00000549883 TRAV26-2A0A0B4J265 109 aa6.48□□□□□ -1.37
HDAC7-229ENST00000549883 F2Z2F3 143 aa6.48□□□□□ -1.37
HDAC7-229ENST00000549883 EREGO14944 169 aa6.48□□□□□ -1.37
HDAC7-229ENST00000549883 HAMPP81172 84 aa6.48□□□□□ -1.37
HDAC7-229ENST00000549883 SRSF3P84103 164 aaKnown RBP6.48□□□□□ -1.37
HDAC7-229ENST00000549883 LAGE3Q14657 143 aa6.48□□□□□ -1.37
HDAC7-229ENST00000549883 MPV17L2Q567V2 206 aa6.48□□□□□ -1.37
HDAC7-229ENST00000549883 Q8N976 141 aa6.48□□□□□ -1.37
HDAC7-229ENST00000549883 UBE2WQ96B02 151 aa6.48□□□□□ -1.37
HDAC7-229ENST00000549883 BIN3Q9NQY0 253 aa6.48□□□□□ -1.37
HDAC7-229ENST00000549883 XKRY2A2RUG3 117 aa6.47□□□□□ -1.37
HDAC7-229ENST00000549883 TMEM262E9PQX1 116 aa6.47□□□□□ -1.37
HDAC7-229ENST00000549883 GATCO43716 136 aaKnown RBP6.47□□□□□ -1.37
HDAC7-229ENST00000549883 XGP55808 180 aa6.47□□□□□ -1.37
HDAC7-229ENST00000549883 TWIST1Q15672 202 aa6.47□□□□□ -1.37
HDAC7-229ENST00000549883 LINC01551Q86U37 167 aa6.47□□□□□ -1.37
HDAC7-229ENST00000549883 Q8N814 137 aa6.47□□□□□ -1.37
HDAC7-229ENST00000549883 BAALCQ8WXS3 180 aa6.47□□□□□ -1.37
HDAC7-229ENST00000549883 PGLYRP4Q96LB8 373 aa6.47□□□□□ -1.37
HDAC7-229ENST00000549883 SMIM7Q9BQ49 75 aa6.47□□□□□ -1.37
HDAC7-229ENST00000549883 CNFNQ9BYD5 112 aa6.47□□□□□ -1.37
HDAC7-229ENST00000549883 TRAV8-3A0A0A6YYJ7 113 aa6.46□□□□□ -1.38
HDAC7-229ENST00000549883 ZNF727A8MUV8 499 aa6.46□□□□□ -1.38
HDAC7-229ENST00000549883 GAS8-AS1O95177 125 aa6.46□□□□□ -1.38
HDAC7-229ENST00000549883 TRGC1P0CF51 173 aa6.46□□□□□ -1.38
HDAC7-229ENST00000549883 GAGE6Q13070 117 aa6.46□□□□□ -1.38
HDAC7-229ENST00000549883 ATRAIDQ6UW56 229 aa6.46□□□□□ -1.38
HDAC7-229ENST00000549883 TEX261Q6UWH6 196 aa6.46□□□□□ -1.38
HDAC7-229ENST00000549883 ENHOQ6UWT2 76 aa6.46□□□□□ -1.38
HDAC7-229ENST00000549883 FAM231DQ6ZW35 169 aa6.46□□□□□ -1.38
HDAC7-229ENST00000549883 C15orf54Q8N8G6 183 aa6.46□□□□□ -1.38
HDAC7-229ENST00000549883 GATD1Q8NB37 220 aa6.46□□□□□ -1.38
HDAC7-229ENST00000549883 CHCHD5Q9BSY4 110 aa6.46□□□□□ -1.38
HDAC7-229ENST00000549883 DPH3P1Q9H4G8 78 aa6.46□□□□□ -1.38
HDAC7-229ENST00000549883 URGCP-MRPS24S4R325 110 aa6.46□□□□□ -1.38
HDAC7-229ENST00000549883 IGKV2D-24A0A075B6R9 120 aa6.45□□□□□ -1.38
HDAC7-229ENST00000549883 A0A087WX48 190 aa6.45□□□□□ -1.38
HDAC7-229ENST00000549883 IGLV5-52A0A0A0MRZ9 124 aa6.45□□□□□ -1.38
HDAC7-229ENST00000549883 GCSHP23434 173 aa6.45□□□□□ -1.38
HDAC7-229ENST00000549883 LINC01620Q4KN68 170 aa6.45□□□□□ -1.38
HDAC7-229ENST00000549883 CDPF1Q6NVV7 123 aa6.45□□□□□ -1.38
HDAC7-229ENST00000549883 WDR73Q6P4I2 378 aa6.45□□□□□ -1.38
HDAC7-229ENST00000549883 RASL11AQ6T310 242 aa6.45□□□□□ -1.38
HDAC7-229ENST00000549883 CLPSL2Q6UWE3 100 aa6.45□□□□□ -1.38
HDAC7-229ENST00000549883 RPL39LQ96EH5 51 aaKnown RBP6.45□□□□□ -1.38
HDAC7-229ENST00000549883 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.44□□□□□ -1.38
HDAC7-229ENST00000549883 ANGP03950 147 aaKnown RBP6.44□□□□□ -1.38
HDAC7-229ENST00000549883 RBX1P62877 108 aa6.44□□□□□ -1.38
HDAC7-229ENST00000549883 TM2D2Q9BX73 214 aa6.44□□□□□ -1.38
HDAC7-229ENST00000549883 GFRA4Q9GZZ7 299 aa6.44□□□□□ -1.38
HDAC7-229ENST00000549883 NIT2Q9NQR4 276 aa6.44□□□□□ -1.38
HDAC7-229ENST00000549883 FAM30AQ9NZY2 134 aa6.44□□□□□ -1.38
HDAC7-229ENST00000549883 A8MWL6 223 aa6.43□□□□□ -1.38
HDAC7-229ENST00000549883 H7C1H1 209 aa6.43□□□□□ -1.38
HDAC7-229ENST00000549883 RPL23P62829 140 aaKnown RBP6.43□□□□□ -1.38
HDAC7-229ENST00000549883 IQCJQ1A5X6 159 aa6.43□□□□□ -1.38
HDAC7-229ENST00000549883 Q8N1X5 172 aa6.43□□□□□ -1.38
HDAC7-229ENST00000549883 ISOC2Q96AB3 205 aa6.43□□□□□ -1.38
HDAC7-229ENST00000549883 CHCHD7Q9BUK0 85 aa6.43□□□□□ -1.38
HDAC7-229ENST00000549883 OSTCQ9NRP0 149 aa6.43□□□□□ -1.38
HDAC7-229ENST00000549883 V9GYV3 84 aa6.43□□□□□ -1.38
HDAC7-229ENST00000549883 IGLV4-60A0A075B6I1 120 aa6.42□□□□□ -1.38
HDAC7-229ENST00000549883 TRBV25-1A0A075B6N4 114 aa6.42□□□□□ -1.38
HDAC7-229ENST00000549883 IGHV1-24A0A0C4DH33 117 aa6.42□□□□□ -1.38
HDAC7-229ENST00000549883 HIGD1CA8MV81 97 aa6.42□□□□□ -1.38
HDAC7-229ENST00000549883 NDUFS6O75380 124 aaKnown RBP6.42□□□□□ -1.38
HDAC7-229ENST00000549883 TMEM241Q24JQ0 296 aa6.42□□□□□ -1.38
HDAC7-229ENST00000549883 CT83Q5H943 113 aa6.42□□□□□ -1.38
HDAC7-229ENST00000549883 KRTAP26-1Q6PEX3 210 aa6.42□□□□□ -1.38
HDAC7-229ENST00000549883 LINC00269Q8N2A0 174 aa6.42□□□□□ -1.38
HDAC7-229ENST00000549883 NTN5Q8WTR8 489 aaPredicted RBP6.42□□□□□ -1.38
HDAC7-229ENST00000549883 TSKUQ8WUA8 353 aa6.42□□□□□ -1.38
HDAC7-229ENST00000549883 SMR3BP02814 79 aaPredicted RBP6.41□□□□□ -1.38
HDAC7-229ENST00000549883 ELOBQ15370 118 aa6.41□□□□□ -1.38
HDAC7-229ENST00000549883 KCNIP4Q6PIL6 250 aa6.41□□□□□ -1.38
HDAC7-229ENST00000549883 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.41□□□□□ -1.38
HDAC7-229ENST00000549883 C20orf203Q8NBC4 194 aa6.41□□□□□ -1.38
HDAC7-229ENST00000549883 RNF185Q96GF1 192 aa6.41□□□□□ -1.38
HDAC7-229ENST00000549883 TMEM243Q9BU79 118 aa6.41□□□□□ -1.38
HDAC7-229ENST00000549883 PRR34Q9NV39 138 aa6.41□□□□□ -1.38
HDAC7-229ENST00000549883 PCLOQ9Y6V0 5065 aa6.41□□□□□ -1.38
HDAC7-229ENST00000549883 IGLV10-54A0A075B6I4 117 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms