RNA–Protein interactions for RNA: ENST00000549417.5

LIN7A-202, Transcript of lin-7 homolog A, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene LIN7A, Length 905 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7A-202ENST00000549417 C9orf116Q5BN46 136 aaPredicted RBP3.97□□□□□ -1.77
LIN7A-202ENST00000549417 PIK3CD-AS1Q5SR53 167 aa3.97□□□□□ -1.77
LIN7A-202ENST00000549417 THAP6Q8TBB0 222 aa3.97□□□□□ -1.77
LIN7A-202ENST00000549417 MITD1Q8WV92 249 aa3.97□□□□□ -1.77
LIN7A-202ENST00000549417 AP3S1Q92572 193 aa3.97□□□□□ -1.77
LIN7A-202ENST00000549417 SFRP2Q96HF1 295 aa3.97□□□□□ -1.77
LIN7A-202ENST00000549417 MLST8Q9BVC4 326 aa3.97□□□□□ -1.77
LIN7A-202ENST00000549417 LSM5Q9Y4Y9 91 aaKnown RBP3.97□□□□□ -1.77
LIN7A-202ENST00000549417 TRBV6-1A0A0K0K1D8 114 aa3.96□□□□□ -1.78
LIN7A-202ENST00000549417 C9orf170A2RU37 121 aa3.96□□□□□ -1.78
LIN7A-202ENST00000549417 ARMS2P0C7Q2 107 aa3.96□□□□□ -1.78
LIN7A-202ENST00000549417 BCL2P10415 239 aa3.96□□□□□ -1.78
LIN7A-202ENST00000549417 MT1HP80294 61 aa3.96□□□□□ -1.78
LIN7A-202ENST00000549417 SMUG1Q53HV7 270 aa3.96□□□□□ -1.78
LIN7A-202ENST00000549417 PRNTQ86SH4 94 aa3.96□□□□□ -1.78
LIN7A-202ENST00000549417 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.96□□□□□ -1.78
LIN7A-202ENST00000549417 SDHCQ99643 169 aaPredicted RBP3.96□□□□□ -1.78
LIN7A-202ENST00000549417 FUNDC2Q9BWH2 189 aa3.96□□□□□ -1.78
LIN7A-202ENST00000549417 VCX3BQ9H321 246 aa3.96□□□□□ -1.78
LIN7A-202ENST00000549417 LYRM2Q9NU23 88 aaPredicted RBP3.96□□□□□ -1.78
LIN7A-202ENST00000549417 IL36BQ9NZH7 164 aa3.96□□□□□ -1.78
LIN7A-202ENST00000549417 MBD2Q9UBB5 411 aa3.96□□□□□ -1.78
LIN7A-202ENST00000549417 MACF1Q9UPN3 7388 aaKnown RBP3.96□□□□□ -1.78
LIN7A-202ENST00000549417 IGHV1-24A0A0C4DH33 117 aa3.95□□□□□ -1.78
LIN7A-202ENST00000549417 IGSF23A1L1A6 192 aa3.95□□□□□ -1.78
LIN7A-202ENST00000549417 B4DEV8 164 aa3.95□□□□□ -1.78
LIN7A-202ENST00000549417 M0R036 132 aa3.95□□□□□ -1.78
LIN7A-202ENST00000549417 DEFA3P59666 94 aa3.95□□□□□ -1.78
LIN7A-202ENST00000549417 ZFP69Q49AA0 526 aa3.95□□□□□ -1.78
LIN7A-202ENST00000549417 FAM74A1Q5RGS3 127 aa3.95□□□□□ -1.78
LIN7A-202ENST00000549417 PSG8Q9UQ74 426 aa3.95□□□□□ -1.78
LIN7A-202ENST00000549417 PKIGQ9Y2B9 76 aa3.95□□□□□ -1.78
LIN7A-202ENST00000549417 A0A087X002 238 aa3.94□□□□□ -1.78
LIN7A-202ENST00000549417 LOC107984640A0A0U1RRK4 108 aa3.94□□□□□ -1.78
LIN7A-202ENST00000549417 F5H697 171 aa3.94□□□□□ -1.78
LIN7A-202ENST00000549417 CFC1BP0CG36 223 aa3.94□□□□□ -1.78
LIN7A-202ENST00000549417 S100A11P31949 105 aa3.94□□□□□ -1.78
LIN7A-202ENST00000549417 SULT1A1P50225 295 aa3.94□□□□□ -1.78
LIN7A-202ENST00000549417 KRTAP10-6P60371 365 aaPredicted RBP3.94□□□□□ -1.78
LIN7A-202ENST00000549417 RAB4BP61018 213 aa3.94□□□□□ -1.78
LIN7A-202ENST00000549417 IQCJQ1A5X6 159 aa3.94□□□□□ -1.78
LIN7A-202ENST00000549417 ZNF674Q2M3X9 581 aa3.94□□□□□ -1.78
LIN7A-202ENST00000549417 TMEM97Q5BJF2 176 aa3.94□□□□□ -1.78
LIN7A-202ENST00000549417 CHCHD10Q8WYQ3 142 aaPredicted RBP3.94□□□□□ -1.78
LIN7A-202ENST00000549417 AQP10Q96PS8 301 aa3.94□□□□□ -1.78
LIN7A-202ENST00000549417 RPP21Q9H633 154 aaKnown RBP3.94□□□□□ -1.78
LIN7A-202ENST00000549417 CARHSP1Q9Y2V2 147 aaKnown RBP3.94□□□□□ -1.78
LIN7A-202ENST00000549417 TMSB15BA0A087X1C1 80 aa3.93□□□□□ -1.78
LIN7A-202ENST00000549417 TPT1P13693 172 aaKnown RBP3.93□□□□□ -1.78
LIN7A-202ENST00000549417 FAUP35544 74 aaKnown RBP3.93□□□□□ -1.78
LIN7A-202ENST00000549417 RPL18AQ02543 176 aaKnown RBP3.93□□□□□ -1.78
LIN7A-202ENST00000549417 SYCNQ0VAF6 134 aa3.93□□□□□ -1.78
LIN7A-202ENST00000549417 KHDC3LQ587J8 217 aa3.93□□□□□ -1.78
LIN7A-202ENST00000549417 LINC00173Q6ZV60 143 aa3.93□□□□□ -1.78
LIN7A-202ENST00000549417 TYMSOSQ8TAI1 123 aa3.93□□□□□ -1.78
LIN7A-202ENST00000549417 NAA50Q9GZZ1 169 aaKnown RBP3.93□□□□□ -1.78
LIN7A-202ENST00000549417 PPDPFQ9H3Y8 114 aa3.93□□□□□ -1.78
LIN7A-202ENST00000549417 FLVCR2Q9UPI3 526 aa3.93□□□□□ -1.78
LIN7A-202ENST00000549417 A0A1B0GUV1 79 aa3.92□□□□□ -1.78
LIN7A-202ENST00000549417 FAM168BA1KXE4 195 aa3.92□□□□□ -1.78
LIN7A-202ENST00000549417 FAM25EA8MYX2 175 aa3.92□□□□□ -1.78
LIN7A-202ENST00000549417 KRBOX1C9JBD0 128 aa3.92□□□□□ -1.78
LIN7A-202ENST00000549417 HMGB3O15347 200 aaKnown RBP3.92□□□□□ -1.78
LIN7A-202ENST00000549417 TCRAP04437 139 aa3.92□□□□□ -1.78
LIN7A-202ENST00000549417 SSTP61278 116 aa3.92□□□□□ -1.78
LIN7A-202ENST00000549417 HBG1P69891 147 aa3.92□□□□□ -1.78
LIN7A-202ENST00000549417 HBG2P69892 147 aa3.92□□□□□ -1.78
LIN7A-202ENST00000549417 FLI1Q01543 452 aaPredicted RBP3.92□□□□□ -1.78
LIN7A-202ENST00000549417 FOXI1Q12951 378 aa3.92□□□□□ -1.78
LIN7A-202ENST00000549417 ASB16-AS1Q495Z4 193 aa3.92□□□□□ -1.78
LIN7A-202ENST00000549417 FAM162BQ5T6X4 162 aa3.92□□□□□ -1.78
LIN7A-202ENST00000549417 STX12Q86Y82 276 aa3.92□□□□□ -1.78
LIN7A-202ENST00000549417 ZFP82Q8N141 532 aa3.92□□□□□ -1.78
LIN7A-202ENST00000549417 TMEM252Q8N6L7 170 aa3.92□□□□□ -1.78
LIN7A-202ENST00000549417 SLC25A21Q9BQT8 299 aaPredicted RBP3.92□□□□□ -1.78
LIN7A-202ENST00000549417 TMEM243Q9BU79 118 aa3.92□□□□□ -1.78
LIN7A-202ENST00000549417 C11orf1Q9H5F2 150 aa3.92□□□□□ -1.78
LIN7A-202ENST00000549417 TRAV34A0A0B4J273 112 aa3.91□□□□□ -1.78
LIN7A-202ENST00000549417 MUC21A0A140T8X8 626 aa3.91□□□□□ -1.78
LIN7A-202ENST00000549417 FABP5P3A8MUU1 101 aa3.91□□□□□ -1.78
LIN7A-202ENST00000549417 UBE2L6O14933 153 aa3.91□□□□□ -1.78
LIN7A-202ENST00000549417 XCL1P47992 114 aa3.91□□□□□ -1.78
LIN7A-202ENST00000549417 NHLH2Q02577 135 aa3.91□□□□□ -1.78
LIN7A-202ENST00000549417 ATP6V1FQ16864 119 aa3.91□□□□□ -1.78
LIN7A-202ENST00000549417 EIF5AL1Q6IS14 154 aaKnown RBP3.91□□□□□ -1.78
LIN7A-202ENST00000549417 TOMM5Q8N4H5 51 aa3.91□□□□□ -1.78
LIN7A-202ENST00000549417 OR5C1Q8NGR4 320 aa3.91□□□□□ -1.78
LIN7A-202ENST00000549417 FLGP20930 4061 aaPredicted RBP3.91□□□□□ -1.78
LIN7A-202ENST00000549417 TRAV6A0A075B6T7 132 aa3.9□□□□□ -1.79
LIN7A-202ENST00000549417 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.9□□□□□ -1.79
LIN7A-202ENST00000549417 K7EQM0 130 aa3.9□□□□□ -1.79
LIN7A-202ENST00000549417 FGF6P10767 208 aa3.9□□□□□ -1.79
LIN7A-202ENST00000549417 CAMPP49913 170 aa3.9□□□□□ -1.79
LIN7A-202ENST00000549417 TMBIM6P55061 237 aa3.9□□□□□ -1.79
LIN7A-202ENST00000549417 TAS2R45P59539 299 aa3.9□□□□□ -1.79
LIN7A-202ENST00000549417 MEF2BQ02080 365 aaPredicted RBP3.9□□□□□ -1.79
LIN7A-202ENST00000549417 KRTAP19-2Q3LHN2 52 aa3.9□□□□□ -1.79
LIN7A-202ENST00000549417 FAM19A5Q7Z5A7 132 aaPredicted RBP3.9□□□□□ -1.79
LIN7A-202ENST00000549417 LINC00337Q8N6G1 96 aa3.9□□□□□ -1.79
LIN7A-202ENST00000549417 OPRPNQ99935 248 aaPredicted RBP3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms