RNA–Protein interactions for RNA: ENST00000546974.1

COL2A1-209, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL2A1, Length 703 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-209ENST00000546974 MUC21A0A0G2JKD1 596 aa9.43□□□□□ -0.9
COL2A1-209ENST00000546974 MUC21A0A140T8X8 626 aa9.43□□□□□ -0.9
COL2A1-209ENST00000546974 PKIAP61925 76 aa9.43□□□□□ -0.9
COL2A1-209ENST00000546974 CCL20P78556 96 aa9.43□□□□□ -0.9
COL2A1-209ENST00000546974 TMEM97Q5BJF2 176 aa9.43□□□□□ -0.9
COL2A1-209ENST00000546974 GNG13Q9P2W3 67 aa9.43□□□□□ -0.9
COL2A1-209ENST00000546974 KIF25-AS1Q9Y6Z4 181 aa9.43□□□□□ -0.9
COL2A1-209ENST00000546974 F5H697 171 aa9.42□□□□□ -0.9
COL2A1-209ENST00000546974 SMIM17P0DL12 118 aa9.42□□□□□ -0.9
COL2A1-209ENST00000546974 RAB5CP51148 216 aa9.42□□□□□ -0.9
COL2A1-209ENST00000546974 ENHOQ6UWT2 76 aa9.42□□□□□ -0.9
COL2A1-209ENST00000546974 DERL1Q9BUN8 251 aa9.42□□□□□ -0.9
COL2A1-209ENST00000546974 C1orf43Q9BWL3 253 aa9.42□□□□□ -0.9
COL2A1-209ENST00000546974 VAX2Q9UIW0 290 aa9.42□□□□□ -0.9
COL2A1-209ENST00000546974 TEX46H3BTG2 121 aa9.41□□□□□ -0.9
COL2A1-209ENST00000546974 CRPP02741 224 aa9.41□□□□□ -0.9
COL2A1-209ENST00000546974 PLA2G1BP04054 148 aaKnown RBP9.41□□□□□ -0.9
COL2A1-209ENST00000546974 SSTP61278 116 aa9.41□□□□□ -0.9
COL2A1-209ENST00000546974 C14orf177Q52M58 125 aa9.41□□□□□ -0.9
COL2A1-209ENST00000546974 MPV17L2Q567V2 206 aa9.41□□□□□ -0.9
COL2A1-209ENST00000546974 EIF5AL1Q6IS14 154 aaKnown RBP9.41□□□□□ -0.9
COL2A1-209ENST00000546974 AKAP14Q86UN6 197 aa9.41□□□□□ -0.9
COL2A1-209ENST00000546974 C15orf54Q8N8G6 183 aa9.41□□□□□ -0.9
COL2A1-209ENST00000546974 AP1S3Q96PC3 154 aa9.41□□□□□ -0.9
COL2A1-209ENST00000546974 IGLV2-8P01709 118 aa9.4□□□□□ -0.9
COL2A1-209ENST00000546974 ANGP03950 147 aaKnown RBP9.4□□□□□ -0.9
COL2A1-209ENST00000546974 RPS20P60866 119 aaKnown RBP9.4□□□□□ -0.9
COL2A1-209ENST00000546974 LINC01620Q4KN68 170 aa9.4□□□□□ -0.9
COL2A1-209ENST00000546974 CENPWQ5EE01 88 aa9.4□□□□□ -0.9
COL2A1-209ENST00000546974 NTM-AS1Q6ZSK4 140 aa9.4□□□□□ -0.9
COL2A1-209ENST00000546974 LINC00528Q8N1L1 170 aa9.4□□□□□ -0.9
COL2A1-209ENST00000546974 DAZAP1Q96EP5 407 aaKnown RBP9.4□□□□□ -0.9
COL2A1-209ENST00000546974 CHCHD5Q9BSY4 110 aa9.4□□□□□ -0.9
COL2A1-209ENST00000546974 FAT3Q8TDW7 4589 aa9.39□□□□□ -0.91
COL2A1-209ENST00000546974 C19orf71A6NCJ1 209 aa9.39□□□□□ -0.91
COL2A1-209ENST00000546974 IGLC6P0CF74 106 aa9.39□□□□□ -0.91
COL2A1-209ENST00000546974 SULT1A2P50226 295 aa9.39□□□□□ -0.91
COL2A1-209ENST00000546974 SMIM12Q96EX1 92 aa9.39□□□□□ -0.91
COL2A1-209ENST00000546974 GZMBP10144 247 aa9.38□□□□□ -0.91
COL2A1-209ENST00000546974 CACNG7P62955 275 aa9.38□□□□□ -0.91
COL2A1-209ENST00000546974 MIAQ16674 131 aa9.38□□□□□ -0.91
COL2A1-209ENST00000546974 SCXQ7RTU7 201 aa9.38□□□□□ -0.91
COL2A1-209ENST00000546974 FER1L6-AS1Q8NA97 138 aa9.38□□□□□ -0.91
COL2A1-209ENST00000546974 OR2D3Q8NGH3 330 aa9.38□□□□□ -0.91
COL2A1-209ENST00000546974 CHAC1Q9BUX1 264 aa9.38□□□□□ -0.91
COL2A1-209ENST00000546974 TRBV25-1A0A075B6N4 114 aa9.37□□□□□ -0.91
COL2A1-209ENST00000546974 RAB19A4D1S5 217 aa9.37□□□□□ -0.91
COL2A1-209ENST00000546974 H7C1H1 209 aa9.37□□□□□ -0.91
COL2A1-209ENST00000546974 M0QY20 66 aa9.37□□□□□ -0.91
COL2A1-209ENST00000546974 PDE6DO43924 150 aa9.37□□□□□ -0.91
COL2A1-209ENST00000546974 GNG4P50150 75 aa9.37□□□□□ -0.91
COL2A1-209ENST00000546974 MEF2BQ02080 365 aaPredicted RBP9.37□□□□□ -0.91
COL2A1-209ENST00000546974 TPPP3Q9BW30 176 aa9.37□□□□□ -0.91
COL2A1-209ENST00000546974 PRR34Q9NV39 138 aa9.37□□□□□ -0.91
COL2A1-209ENST00000546974 LRP1Q07954 4544 aaKnown RBP9.36□□□□□ -0.91
COL2A1-209ENST00000546974 XKRY2A2RUG3 117 aa9.36□□□□□ -0.91
COL2A1-209ENST00000546974 F2Z2F3 143 aa9.36□□□□□ -0.91
COL2A1-209ENST00000546974 IFNA1P01562 189 aa9.36□□□□□ -0.91
COL2A1-209ENST00000546974 RBX1P62877 108 aa9.36□□□□□ -0.91
COL2A1-209ENST00000546974 IQCJQ1A5X6 159 aa9.36□□□□□ -0.91
COL2A1-209ENST00000546974 BIN3Q9NQY0 253 aa9.36□□□□□ -0.91
COL2A1-209ENST00000546974 IGHV1-24A0A0C4DH33 117 aa9.35□□□□□ -0.91
COL2A1-209ENST00000546974 USP17L23D6RBM5 183 aa9.35□□□□□ -0.91
COL2A1-209ENST00000546974 P01737 135 aa9.35□□□□□ -0.91
COL2A1-209ENST00000546974 MGPP08493 103 aa9.35□□□□□ -0.91
COL2A1-209ENST00000546974 GAGE6Q13070 117 aa9.35□□□□□ -0.91
COL2A1-209ENST00000546974 SUMO4Q6EEV6 95 aa9.35□□□□□ -0.91
COL2A1-209ENST00000546974 DEFB104AQ8WTQ1 72 aa9.35□□□□□ -0.91
COL2A1-209ENST00000546974 MED9Q9NWA0 146 aa9.35□□□□□ -0.91
COL2A1-209ENST00000546974 HLA-DQA1P01909 254 aa9.34□□□□□ -0.91
COL2A1-209ENST00000546974 TRGC1P0CF51 173 aa9.34□□□□□ -0.91
COL2A1-209ENST00000546974 SLC51BQ86UW2 128 aa9.34□□□□□ -0.91
COL2A1-209ENST00000546974 LINC00269Q8N2A0 174 aa9.34□□□□□ -0.91
COL2A1-209ENST00000546974 C9orf62Q8N4C0 152 aa9.34□□□□□ -0.91
COL2A1-209ENST00000546974 CIRBP-AS1Q8TBR5 109 aa9.34□□□□□ -0.91
COL2A1-209ENST00000546974 TRBV20OR9-2A0A075B6H5 130 aa9.33□□□□□ -0.92
COL2A1-209ENST00000546974 J3QL48 77 aa9.33□□□□□ -0.92
COL2A1-209ENST00000546974 BCL2P10415 239 aa9.33□□□□□ -0.92
COL2A1-209ENST00000546974 DGAT2L7PQ6IED9 249 aa9.33□□□□□ -0.92
COL2A1-209ENST00000546974 WDR73Q6P4I2 378 aa9.33□□□□□ -0.92
COL2A1-209ENST00000546974 KRTAP26-1Q6PEX3 210 aa9.33□□□□□ -0.92
COL2A1-209ENST00000546974 RASL11AQ6T310 242 aa9.33□□□□□ -0.92
COL2A1-209ENST00000546974 LYZL1Q6UWQ5 148 aa9.33□□□□□ -0.92
COL2A1-209ENST00000546974 KRTAP29-1A8MX34 341 aaPredicted RBP9.32□□□□□ -0.92
COL2A1-209ENST00000546974 PRSS1P07477 247 aa9.32□□□□□ -0.92
COL2A1-209ENST00000546974 NTF3P20783 257 aa9.32□□□□□ -0.92
COL2A1-209ENST00000546974 TAGLN2P37802 199 aaKnown RBP9.32□□□□□ -0.92
COL2A1-209ENST00000546974 NKX2-5P52952 324 aaPredicted RBP9.32□□□□□ -0.92
COL2A1-209ENST00000546974 CLPSL2Q6UWE3 100 aa9.32□□□□□ -0.92
COL2A1-209ENST00000546974 DPH3P1Q9H4G8 78 aa9.32□□□□□ -0.92
COL2A1-209ENST00000546974 NIT2Q9NQR4 276 aa9.32□□□□□ -0.92
COL2A1-209ENST00000546974 A0A1B0GUV1 79 aa9.31□□□□□ -0.92
COL2A1-209ENST00000546974 REG3AQ06141 175 aa9.31□□□□□ -0.92
COL2A1-209ENST00000546974 C20orf203Q8NBC4 194 aa9.31□□□□□ -0.92
COL2A1-209ENST00000546974 NUDT10Q8NFP7 164 aa9.31□□□□□ -0.92
COL2A1-209ENST00000546974 NUDT11Q96G61 164 aa9.31□□□□□ -0.92
COL2A1-209ENST00000546974 PGLYRP4Q96LB8 373 aa9.31□□□□□ -0.92
COL2A1-209ENST00000546974 TRAV8-4A0A0B4J246 113 aa9.3□□□□□ -0.92
COL2A1-209ENST00000546974 CTRLP40313 264 aa9.3□□□□□ -0.92
COL2A1-209ENST00000546974 KRTAP10-4P60372 401 aaPredicted RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms