RNA–Protein interactions for RNA: ENST00000544506.1

LEMD3-205, Transcript of LEM domain containing 3, humanhuman

TSL 5

Gene LEMD3, Length 412 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-205ENST00000544506 UBR1Q8IWV7 1749 aa1.06□□□□□ -2.24
LEMD3-205ENST00000544506 DDX60Q8IY21 1712 aaKnown RBP1.06□□□□□ -2.24
LEMD3-205ENST00000544506 ABCA3Q99758 1704 aa1.06□□□□□ -2.24
LEMD3-205ENST00000544506 TOGARAM1Q9Y4F4 1720 aa1.06□□□□□ -2.24
LEMD3-205ENST00000544506 SIPA1L3O60292 1781 aaPredicted RBP1.06□□□□□ -2.24
LEMD3-205ENST00000544506 SLIT1O75093 1534 aa1.06□□□□□ -2.24
LEMD3-205ENST00000544506 ANK1P16157 1881 aa1.06□□□□□ -2.24
LEMD3-205ENST00000544506 TRAV2A0A0B4J234 112 aa1.06□□□□□ -2.24
LEMD3-205ENST00000544506 TRAV13-1A0A0B4J241 112 aa1.06□□□□□ -2.24
LEMD3-205ENST00000544506 IGHV1-24A0A0C4DH33 117 aa1.06□□□□□ -2.24
LEMD3-205ENST00000544506 CEBPZOSA8MTT3 80 aa1.06□□□□□ -2.24
LEMD3-205ENST00000544506 A8MWV9 139 aa1.06□□□□□ -2.24
LEMD3-205ENST00000544506 SYS1-DBNDD2H3BUS1 97 aa1.06□□□□□ -2.24
LEMD3-205ENST00000544506 J3QLW9 94 aa1.06□□□□□ -2.24
LEMD3-205ENST00000544506 M0R129 80 aa1.06□□□□□ -2.24
LEMD3-205ENST00000544506 ATOX1O00244 68 aa1.06□□□□□ -2.24
LEMD3-205ENST00000544506 SDCBPO00560 298 aaPredicted RBP1.06□□□□□ -2.24
LEMD3-205ENST00000544506 HCRTO43612 131 aa1.06□□□□□ -2.24
LEMD3-205ENST00000544506 SSSCA1O60232 199 aa1.06□□□□□ -2.24
LEMD3-205ENST00000544506 YPEL1O60688 119 aa1.06□□□□□ -2.24
LEMD3-205ENST00000544506 CST7O76096 145 aa1.06□□□□□ -2.24
LEMD3-205ENST00000544506 C1QAP02745 245 aa1.06□□□□□ -2.24
LEMD3-205ENST00000544506 CD3DP04234 171 aa1.06□□□□□ -2.24
LEMD3-205ENST00000544506 SLC25A5P05141 298 aaKnown RBP1.06□□□□□ -2.24
LEMD3-205ENST00000544506 ACYP1P07311 99 aa1.06□□□□□ -2.24
LEMD3-205ENST00000544506 C3orf79P0CE67 100 aa1.06□□□□□ -2.24
LEMD3-205ENST00000544506 IGLC6P0CF74 106 aa1.06□□□□□ -2.24
LEMD3-205ENST00000544506 COX8AP10176 69 aa1.06□□□□□ -2.24
LEMD3-205ENST00000544506 SLC25A6P12236 298 aa1.06□□□□□ -2.24
LEMD3-205ENST00000544506 FXYD6P3P58550 94 aa1.06□□□□□ -2.24
LEMD3-205ENST00000544506 UBE2L3P68036 154 aaKnown RBP1.06□□□□□ -2.24
LEMD3-205ENST00000544506 MRPS36P82909 103 aaKnown RBP1.06□□□□□ -2.24
LEMD3-205ENST00000544506 PLGLB1Q02325 96 aa1.06□□□□□ -2.24
LEMD3-205ENST00000544506 EIF3IQ13347 325 aaKnown RBP1.06□□□□□ -2.24
LEMD3-205ENST00000544506 PMAIP1Q13794 54 aa1.06□□□□□ -2.24
LEMD3-205ENST00000544506 RRN3P1Q2M238 152 aa1.06□□□□□ -2.24
LEMD3-205ENST00000544506 ETDBQ3ZM63 59 aa1.06□□□□□ -2.24
LEMD3-205ENST00000544506 TRAPPC6BQ86SZ2 158 aa1.06□□□□□ -2.24
LEMD3-205ENST00000544506 ANKRD29Q8N6D5 301 aa1.06□□□□□ -2.24
LEMD3-205ENST00000544506 NUP35Q8NFH5 326 aa1.06□□□□□ -2.24
LEMD3-205ENST00000544506 LSM10Q969L4 123 aaKnown RBP1.06□□□□□ -2.24
LEMD3-205ENST00000544506 CHCHD1Q96BP2 118 aaKnown RBP1.06□□□□□ -2.24
LEMD3-205ENST00000544506 PRELID3AQ96N28 172 aa1.06□□□□□ -2.24
LEMD3-205ENST00000544506 YPEL2Q96QA6 119 aa1.06□□□□□ -2.24
LEMD3-205ENST00000544506 IDI2-AS1Q9NZ38 188 aa1.06□□□□□ -2.24
LEMD3-205ENST00000544506 HIGD1BQ9P298 99 aa1.06□□□□□ -2.24
LEMD3-205ENST00000544506 CHCHD2Q9Y6H1 151 aaPredicted RBP1.06□□□□□ -2.24
LEMD3-205ENST00000544506 LY96Q9Y6Y9 160 aa1.06□□□□□ -2.24
LEMD3-205ENST00000544506 DENND4CQ5VZ89 1909 aa1.06□□□□□ -2.24
LEMD3-205ENST00000544506 DEPDC5O75140 1603 aa1.06□□□□□ -2.24
LEMD3-205ENST00000544506 CICQ96RK0 1608 aaPredicted RBP1.06□□□□□ -2.24
LEMD3-205ENST00000544506 DDX60LQ5H9U9 1706 aaKnown RBP1.06□□□□□ -2.24
LEMD3-205ENST00000544506 SNRNP200O75643 2136 aaKnown RBP1.06□□□□□ -2.24
LEMD3-205ENST00000544506 RGPD3A6NKT7 1758 aaPredicted RBP1.06□□□□□ -2.24
LEMD3-205ENST00000544506 RGPD4Q7Z3J3 1758 aa1.06□□□□□ -2.24
LEMD3-205ENST00000544506 DLEC1Q9Y238 1755 aa1.06□□□□□ -2.24
LEMD3-205ENST00000544506 ARFGEF2Q9Y6D5 1785 aa1.06□□□□□ -2.24
LEMD3-205ENST00000544506 ARFGEF3Q5TH69 2177 aa1.06□□□□□ -2.24
LEMD3-205ENST00000544506 XIRP1Q702N8 1843 aaKnown RBP1.05□□□□□ -2.24
LEMD3-205ENST00000544506 GOLGA4Q13439 2230 aaKnown RBP1.05□□□□□ -2.24
LEMD3-205ENST00000544506 SBF1O95248 1867 aa1.05□□□□□ -2.24
LEMD3-205ENST00000544506 NUP210LQ5VU65 1888 aa1.05□□□□□ -2.24
LEMD3-205ENST00000544506 ANAPC1Q9H1A4 1944 aa1.05□□□□□ -2.24
LEMD3-205ENST00000544506 GLI3P10071 1580 aa1.05□□□□□ -2.24
LEMD3-205ENST00000544506 MED1Q15648 1581 aaPredicted RBP1.05□□□□□ -2.24
LEMD3-205ENST00000544506 SCN10AQ9Y5Y9 1956 aa1.05□□□□□ -2.24
LEMD3-205ENST00000544506 NCOA6Q14686 2063 aaPredicted RBP1.05□□□□□ -2.24
LEMD3-205ENST00000544506 PLCH1Q4KWH8 1693 aa1.05□□□□□ -2.24
LEMD3-205ENST00000544506 RREB1Q92766 1687 aa1.05□□□□□ -2.24
LEMD3-205ENST00000544506 ALS2Q96Q42 1657 aa1.05□□□□□ -2.24
LEMD3-205ENST00000544506 TRAV27A0A087WT01 109 aa1.05□□□□□ -2.24
LEMD3-205ENST00000544506 SPAARA0A1B0GVQ0 90 aa1.05□□□□□ -2.24
LEMD3-205ENST00000544506 A6NIN4 97 aa1.05□□□□□ -2.24
LEMD3-205ENST00000544506 CCDC179H3BU77 68 aa1.05□□□□□ -2.24
LEMD3-205ENST00000544506 M0R2P5 195 aa1.05□□□□□ -2.24
LEMD3-205ENST00000544506 NDUFB3O43676 98 aa1.05□□□□□ -2.24
LEMD3-205ENST00000544506 LEPROTL1O95214 131 aa1.05□□□□□ -2.24
LEMD3-205ENST00000544506 IGHV3-7P01780 117 aa1.05□□□□□ -2.24
LEMD3-205ENST00000544506 MT-ATP8P03928 68 aa1.05□□□□□ -2.24
LEMD3-205ENST00000544506 COX6CP09669 75 aa1.05□□□□□ -2.24
LEMD3-205ENST00000544506 COX6A1P12074 109 aa1.05□□□□□ -2.24
LEMD3-205ENST00000544506 CRYGSP22914 178 aa1.05□□□□□ -2.24
LEMD3-205ENST00000544506 ATP5EP56381 51 aaPredicted RBP1.05□□□□□ -2.24
LEMD3-205ENST00000544506 PCBD1P61457 104 aa1.05□□□□□ -2.24
LEMD3-205ENST00000544506 NPC2P61916 151 aa1.05□□□□□ -2.24
LEMD3-205ENST00000544506 RPL38P63173 70 aaKnown RBP1.05□□□□□ -2.24
LEMD3-205ENST00000544506 RTL8BQ17RB0 113 aa1.05□□□□□ -2.24
LEMD3-205ENST00000544506 VMA21Q3ZAQ7 101 aa1.05□□□□□ -2.24
LEMD3-205ENST00000544506 NMSQ5H8A3 153 aa1.05□□□□□ -2.24
LEMD3-205ENST00000544506 TEN1Q86WV5 123 aa1.05□□□□□ -2.24
LEMD3-205ENST00000544506 OR10AC1Q8NH08 325 aa1.05□□□□□ -2.24
LEMD3-205ENST00000544506 BORCS8Q96FH0 119 aa1.05□□□□□ -2.24
LEMD3-205ENST00000544506 LINC00526Q96FQ7 95 aa1.05□□□□□ -2.24
LEMD3-205ENST00000544506 RTL8AQ9BWD3 113 aa1.05□□□□□ -2.24
LEMD3-205ENST00000544506 IL36BQ9NZH7 164 aa1.05□□□□□ -2.24
LEMD3-205ENST00000544506 PCTPQ9UKL6 214 aa1.05□□□□□ -2.24
LEMD3-205ENST00000544506 PKIGQ9Y2B9 76 aa1.05□□□□□ -2.24
LEMD3-205ENST00000544506 LINC00312Q9Y6C7 94 aa1.05□□□□□ -2.24
LEMD3-205ENST00000544506 PEAK1Q9H792 1746 aa1.05□□□□□ -2.24
LEMD3-205ENST00000544506 DSPPQ9NZW4 1301 aa1.05□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms