RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 PPBPP02775 128 aa16.11■□□□□ 0.17
HOMER3-205ENST00000542541 P0DMU3 169 aa16.11■□□□□ 0.17
HOMER3-205ENST00000542541 FAM231AP0DMU4 169 aa16.11■□□□□ 0.17
HOMER3-205ENST00000542541 FAM231CP0DMU5 169 aa16.11■□□□□ 0.17
HOMER3-205ENST00000542541 SRIP30626 198 aa16.11■□□□□ 0.17
HOMER3-205ENST00000542541 CKS2P33552 79 aa16.11■□□□□ 0.17
HOMER3-205ENST00000542541 TNFRSF18Q9Y5U5 241 aa16.11■□□□□ 0.17
HOMER3-205ENST00000542541 TRBV7-3A0A075B6L6 115 aa16.1■□□□□ 0.17
HOMER3-205ENST00000542541 LOC100131303A0A0U1RQF7 123 aa16.1■□□□□ 0.17
HOMER3-205ENST00000542541 GAGE12JA6NER3 117 aa16.09■□□□□ 0.17
HOMER3-205ENST00000542541 GAGE1Q13065 139 aa16.09■□□□□ 0.17
HOMER3-205ENST00000542541 GAGE4Q13068 117 aa16.09■□□□□ 0.17
HOMER3-205ENST00000542541 GAGE5Q13069 117 aa16.09■□□□□ 0.17
HOMER3-205ENST00000542541 GAGE13Q4V321 117 aa16.09■□□□□ 0.17
HOMER3-205ENST00000542541 CASC10Q5T4H9 136 aa16.09■□□□□ 0.17
HOMER3-205ENST00000542541 NEXN-AS1Q8NBZ9 246 aa16.09■□□□□ 0.17
HOMER3-205ENST00000542541 ZNRF2Q8NHG8 242 aa16.09■□□□□ 0.17
HOMER3-205ENST00000542541 A0A096LPF7 62 aa16.08■□□□□ 0.17
HOMER3-205ENST00000542541 APCSP02743 223 aa16.08■□□□□ 0.17
HOMER3-205ENST00000542541 Q9UF83 564 aa16.08■□□□□ 0.17
HOMER3-205ENST00000542541 APLNQ9ULZ1 77 aa16.08■□□□□ 0.17
HOMER3-205ENST00000542541 NEGR1Q7Z3B1 354 aa16.08■□□□□ 0.16
HOMER3-205ENST00000542541 STARD9Q9P2P6 4700 aa16.07■□□□□ 0.16
HOMER3-205ENST00000542541 OR10J3Q5JRS4 329 aa16.07■□□□□ 0.16
HOMER3-205ENST00000542541 ORMDL3Q8N138 153 aa16.07■□□□□ 0.16
HOMER3-205ENST00000542541 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.07■□□□□ 0.16
HOMER3-205ENST00000542541 TRAPPC1Q9Y5R8 145 aa16.07■□□□□ 0.16
HOMER3-205ENST00000542541 D6R8Y8 96 aa16.06■□□□□ 0.16
HOMER3-205ENST00000542541 SMKR1H3BMG3 65 aa16.05■□□□□ 0.16
HOMER3-205ENST00000542541 NCR2O95944 276 aa16.05■□□□□ 0.16
HOMER3-205ENST00000542541 ATP6V0E2Q8NHE4 81 aa16.05■□□□□ 0.16
HOMER3-205ENST00000542541 RPL39LQ96EH5 51 aaKnown RBP16.05■□□□□ 0.16
HOMER3-205ENST00000542541 MRPL18Q9H0U6 180 aaKnown RBP16.05■□□□□ 0.16
HOMER3-205ENST00000542541 COLCA2A8K830 154 aa16.05■□□□□ 0.16
HOMER3-205ENST00000542541 UBE2D3P61077 147 aa16.05■□□□□ 0.16
HOMER3-205ENST00000542541 UBE2D2P62837 147 aa16.05■□□□□ 0.16
HOMER3-205ENST00000542541 FABP9Q0Z7S8 132 aa16.05■□□□□ 0.16
HOMER3-205ENST00000542541 DYNC2H1Q8NCM8 4307 aaKnown RBP16.04■□□□□ 0.16
HOMER3-205ENST00000542541 TRBV6-5A0A0K0K1A5 114 aa16.04■□□□□ 0.16
HOMER3-205ENST00000542541 GAS8-AS1O95177 125 aa16.04■□□□□ 0.16
HOMER3-205ENST00000542541 LINC00694P0DN24 101 aa16.04■□□□□ 0.16
HOMER3-205ENST00000542541 RPS10P46783 165 aaKnown RBP16.04■□□□□ 0.16
HOMER3-205ENST00000542541 ST20Q9HBF5 79 aa16.04■□□□□ 0.16
HOMER3-205ENST00000542541 LAMTOR2Q9Y2Q5 125 aa16.04■□□□□ 0.16
HOMER3-205ENST00000542541 PHOX2AO14813 284 aa16.03■□□□□ 0.16
HOMER3-205ENST00000542541 PRELID3AQ96N28 172 aa16.03■□□□□ 0.16
HOMER3-205ENST00000542541 DAZ4Q86SG3 579 aaKnown RBP16.02■□□□□ 0.16
HOMER3-205ENST00000542541 NRACQ8N912 160 aa16.02■□□□□ 0.16
HOMER3-205ENST00000542541 DAZ3Q9NR90 486 aaKnown RBP16.02■□□□□ 0.16
HOMER3-205ENST00000542541 TNFRSF6BO95407 300 aa16.01■□□□□ 0.15
HOMER3-205ENST00000542541 RAB5AP20339 215 aa16.01■□□□□ 0.15
HOMER3-205ENST00000542541 C20orf78Q9BR46 151 aa16.01■□□□□ 0.15
HOMER3-205ENST00000542541 KIAA1644Q3SXP7 199 aa16.01■□□□□ 0.15
HOMER3-205ENST00000542541 GTSF1LQ9H1H1 148 aa16.01■□□□□ 0.15
HOMER3-205ENST00000542541 SDHAF1A6NFY7 115 aa16■□□□□ 0.15
HOMER3-205ENST00000542541 CCL18P55774 89 aa16■□□□□ 0.15
HOMER3-205ENST00000542541 SUMO2P61956 95 aaKnown RBP16■□□□□ 0.15
HOMER3-205ENST00000542541 LYPD5Q6UWN5 251 aa15.99■□□□□ 0.15
HOMER3-205ENST00000542541 NPYP01303 97 aa15.98■□□□□ 0.15
HOMER3-205ENST00000542541 TIRAPP58753 221 aa15.98■□□□□ 0.15
HOMER3-205ENST00000542541 TMEM97Q5BJF2 176 aa15.97■□□□□ 0.15
HOMER3-205ENST00000542541 TMEM70Q9BUB7 260 aa15.97■□□□□ 0.15
HOMER3-205ENST00000542541 VCYO14598 125 aa15.97■□□□□ 0.15
HOMER3-205ENST00000542541 POLR2KP53803 58 aaKnown RBP15.97■□□□□ 0.15
HOMER3-205ENST00000542541 ESRGQ1W209 222 aa15.97■□□□□ 0.15
HOMER3-205ENST00000542541 TENM2Q9NT68 2774 aa15.96■□□□□ 0.15
HOMER3-205ENST00000542541 IGHV3-38A0A0C4DH36 116 aa15.96■□□□□ 0.15
HOMER3-205ENST00000542541 ALKBH7Q9BT30 221 aaPredicted RBP15.96■□□□□ 0.15
HOMER3-205ENST00000542541 I3L3M4 83 aa15.95■□□□□ 0.14
HOMER3-205ENST00000542541 PMCHP20382 165 aa15.95■□□□□ 0.14
HOMER3-205ENST00000542541 RPL32P62910 135 aaKnown RBP15.95■□□□□ 0.14
HOMER3-205ENST00000542541 MAP1LC3AQ9H492 121 aa15.95■□□□□ 0.14
HOMER3-205ENST00000542541 TRBV27A0A0K0K1C4 114 aa15.94■□□□□ 0.14
HOMER3-205ENST00000542541 PRSS47A8MTI9 375 aa15.94■□□□□ 0.14
HOMER3-205ENST00000542541 COTL1Q14019 142 aa15.94■□□□□ 0.14
HOMER3-205ENST00000542541 PLECQ15149 4684 aaKnown RBP15.94■□□□□ 0.14
HOMER3-205ENST00000542541 UBE2DNLQ8IWF7 75 aa15.94■□□□□ 0.14
HOMER3-205ENST00000542541 TRGC2P03986 189 aa15.93■□□□□ 0.14
HOMER3-205ENST00000542541 KIR2DL4Q99706 377 aa15.93■□□□□ 0.14
HOMER3-205ENST00000542541 LELP1Q5T871 98 aa15.92■□□□□ 0.14
HOMER3-205ENST00000542541 SMIM2Q9BVW6 85 aa15.92■□□□□ 0.14
HOMER3-205ENST00000542541 TRBV6-8A0A0A6YYG3 113 aa15.91■□□□□ 0.14
HOMER3-205ENST00000542541 LINC00588Q9Y4M8 146 aa15.91■□□□□ 0.14
HOMER3-205ENST00000542541 TRAV8-6A0A0B4J262 113 aa15.9■□□□□ 0.14
HOMER3-205ENST00000542541 TCAPO15273 167 aa15.9■□□□□ 0.14
HOMER3-205ENST00000542541 LGALS9CQ6DKI2 356 aa15.9■□□□□ 0.14
HOMER3-205ENST00000542541 MRPS16Q9Y3D3 137 aaKnown RBP15.9■□□□□ 0.14
HOMER3-205ENST00000542541 LOC389332A0A1B0GUA5 103 aa15.9■□□□□ 0.14
HOMER3-205ENST00000542541 NXT2Q9NPJ8 142 aaKnown RBP15.89■□□□□ 0.13
HOMER3-205ENST00000542541 TRBV25-1A0A075B6N4 114 aa15.88■□□□□ 0.13
HOMER3-205ENST00000542541 IGHV1-24A0A0C4DH33 117 aa15.88■□□□□ 0.13
HOMER3-205ENST00000542541 FCER1GP30273 86 aa15.88■□□□□ 0.13
HOMER3-205ENST00000542541 NTM-AS1Q6ZSK4 140 aa15.88■□□□□ 0.13
HOMER3-205ENST00000542541 Q8N8P6 123 aa15.87■□□□□ 0.13
HOMER3-205ENST00000542541 UPK3BQ9BT76 320 aa15.87■□□□□ 0.13
HOMER3-205ENST00000542541 AMTP48728 403 aa15.86■□□□□ 0.13
HOMER3-205ENST00000542541 IQCJQ1A5X6 159 aa15.86■□□□□ 0.13
HOMER3-205ENST00000542541 PRSS3P2Q8NHM4 247 aa15.86■□□□□ 0.13
HOMER3-205ENST00000542541 DEFB104AQ8WTQ1 72 aa15.86■□□□□ 0.13
HOMER3-205ENST00000542541 TSHBP01222 138 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms