RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 VWFP04275 2813 aa8.46□□□□□ -1.05
VTN-202ENST00000539746 K7EQD1 137 aa8.46□□□□□ -1.06
VTN-202ENST00000539746 DEFB130BP0DP73 79 aa8.46□□□□□ -1.06
VTN-202ENST00000539746 DEFB130AP0DP74 79 aa8.46□□□□□ -1.06
VTN-202ENST00000539746 FCER1GP30273 86 aa8.46□□□□□ -1.06
VTN-202ENST00000539746 KIAA1644Q3SXP7 199 aa8.46□□□□□ -1.06
VTN-202ENST00000539746 PAPPA-AS1Q5QFB9 102 aa8.46□□□□□ -1.06
VTN-202ENST00000539746 FAM222AQ5U5X8 452 aa8.46□□□□□ -1.06
VTN-202ENST00000539746 SUMO4Q6EEV6 95 aa8.46□□□□□ -1.06
VTN-202ENST00000539746 RNASEKQ6P5S7 137 aaKnown RBP8.46□□□□□ -1.06
VTN-202ENST00000539746 Q6ZTI0 123 aa8.46□□□□□ -1.06
VTN-202ENST00000539746 Q8N8P6 123 aa8.46□□□□□ -1.06
VTN-202ENST00000539746 RNF185Q96GF1 192 aa8.46□□□□□ -1.06
VTN-202ENST00000539746 TM2D3Q9BRN9 247 aa8.46□□□□□ -1.06
VTN-202ENST00000539746 NOTCH3Q9UM47 2321 aa8.45□□□□□ -1.06
VTN-202ENST00000539746 IFITM10A6NMD0 228 aa8.45□□□□□ -1.06
VTN-202ENST00000539746 I3L3M4 83 aa8.45□□□□□ -1.06
VTN-202ENST00000539746 K7EIL1 84 aa8.45□□□□□ -1.06
VTN-202ENST00000539746 M0QY20 66 aa8.45□□□□□ -1.06
VTN-202ENST00000539746 HIST1H2BLQ99880 126 aa8.45□□□□□ -1.06
VTN-202ENST00000539746 SMIM2Q9BVW6 85 aa8.45□□□□□ -1.06
VTN-202ENST00000539746 TRBV7-3A0A075B6L6 115 aa8.44□□□□□ -1.06
VTN-202ENST00000539746 TRBV27A0A0K0K1C4 114 aa8.44□□□□□ -1.06
VTN-202ENST00000539746 PLAC8L1A1L4L8 177 aa8.44□□□□□ -1.06
VTN-202ENST00000539746 H3BNG1 76 aa8.44□□□□□ -1.06
VTN-202ENST00000539746 LAGE3Q14657 143 aa8.44□□□□□ -1.06
VTN-202ENST00000539746 OR10D4PQ8NGN7 298 aa8.44□□□□□ -1.06
VTN-202ENST00000539746 C20orf202A1L168 122 aa8.43□□□□□ -1.06
VTN-202ENST00000539746 NPSP0C0P6 89 aa8.43□□□□□ -1.06
VTN-202ENST00000539746 FABP4P15090 132 aa8.43□□□□□ -1.06
VTN-202ENST00000539746 GATA1P15976 413 aaPredicted RBP8.43□□□□□ -1.06
VTN-202ENST00000539746 COTL1Q14019 142 aa8.43□□□□□ -1.06
VTN-202ENST00000539746 JOSD1Q15040 202 aaPredicted RBP8.43□□□□□ -1.06
VTN-202ENST00000539746 UFSP1Q6NVU6 142 aa8.43□□□□□ -1.06
VTN-202ENST00000539746 NIT1Q86X76 327 aa8.43□□□□□ -1.06
VTN-202ENST00000539746 C11orf45Q8TAV5 145 aa8.43□□□□□ -1.06
VTN-202ENST00000539746 HHLA3Q9XRX5 114 aa8.43□□□□□ -1.06
VTN-202ENST00000539746 AGRNO00468 2067 aa8.42□□□□□ -1.06
VTN-202ENST00000539746 TRAV26-1A0A087WT03 109 aa8.42□□□□□ -1.06
VTN-202ENST00000539746 SDHAF1A6NFY7 115 aa8.42□□□□□ -1.06
VTN-202ENST00000539746 ATP5LO75964 103 aa8.42□□□□□ -1.06
VTN-202ENST00000539746 NPYP01303 97 aa8.42□□□□□ -1.06
VTN-202ENST00000539746 HBDP02042 147 aa8.42□□□□□ -1.06
VTN-202ENST00000539746 AMTP48728 403 aa8.42□□□□□ -1.06
VTN-202ENST00000539746 LINC00315P59091 139 aa8.42□□□□□ -1.06
VTN-202ENST00000539746 NRACQ8N912 160 aa8.42□□□□□ -1.06
VTN-202ENST00000539746 LINC01546A6NGU7 62 aa8.41□□□□□ -1.06
VTN-202ENST00000539746 PAX4O43316 350 aa8.41□□□□□ -1.06
VTN-202ENST00000539746 SERF1AO75920 110 aa8.41□□□□□ -1.06
VTN-202ENST00000539746 NUDT3O95989 172 aa8.41□□□□□ -1.06
VTN-202ENST00000539746 BTF3P20290 206 aaKnown RBP8.41□□□□□ -1.06
VTN-202ENST00000539746 PYY3Q5JQD4 70 aa8.41□□□□□ -1.06
VTN-202ENST00000539746 TMEM70Q9BUB7 260 aa8.41□□□□□ -1.06
VTN-202ENST00000539746 LOC389332A0A1B0GUA5 103 aa8.4□□□□□ -1.06
VTN-202ENST00000539746 H7C423 109 aa8.4□□□□□ -1.06
VTN-202ENST00000539746 LEPROTL1O95214 131 aa8.4□□□□□ -1.06
VTN-202ENST00000539746 MRPL23Q16540 153 aaKnown RBP8.4□□□□□ -1.06
VTN-202ENST00000539746 SBSPONQ8IVN8 264 aa8.4□□□□□ -1.06
VTN-202ENST00000539746 ZNF479Q96JC4 524 aa8.4□□□□□ -1.06
VTN-202ENST00000539746 GTSF1LQ9H1H1 148 aa8.4□□□□□ -1.06
VTN-202ENST00000539746 CYSLTR1Q9Y271 337 aa8.4□□□□□ -1.06
VTN-202ENST00000539746 TRAV10A0A0B4J240 114 aa8.39□□□□□ -1.07
VTN-202ENST00000539746 TRAV26-2A0A0B4J265 109 aa8.39□□□□□ -1.07
VTN-202ENST00000539746 IFI27P40305 119 aaPredicted RBP8.39□□□□□ -1.07
VTN-202ENST00000539746 POLR2KP53803 58 aaKnown RBP8.39□□□□□ -1.07
VTN-202ENST00000539746 IQCJQ1A5X6 159 aa8.39□□□□□ -1.07
VTN-202ENST00000539746 SLC25A29Q8N8R3 303 aa8.39□□□□□ -1.07
VTN-202ENST00000539746 MAP1LC3CQ9BXW4 147 aa8.39□□□□□ -1.07
VTN-202ENST00000539746 JPT2Q9H910 190 aa8.39□□□□□ -1.07
VTN-202ENST00000539746 ICOSQ9Y6W8 199 aa8.39□□□□□ -1.07
VTN-202ENST00000539746 IGHV3-73A0A0B4J1V6 119 aa8.38□□□□□ -1.07
VTN-202ENST00000539746 F5H768 121 aa8.38□□□□□ -1.07
VTN-202ENST00000539746 SMKR1H3BMG3 65 aa8.38□□□□□ -1.07
VTN-202ENST00000539746 PDZD11Q5EBL8 140 aa8.38□□□□□ -1.07
VTN-202ENST00000539746 C15orf53Q8NAA6 179 aa8.38□□□□□ -1.07
VTN-202ENST00000539746 TMEM141Q96I45 108 aa8.38□□□□□ -1.07
VTN-202ENST00000539746 TRBV25-1A0A075B6N4 114 aa8.37□□□□□ -1.07
VTN-202ENST00000539746 PCP4L1A6NKN8 68 aa8.37□□□□□ -1.07
VTN-202ENST00000539746 TSTD3H0UI37 97 aa8.37□□□□□ -1.07
VTN-202ENST00000539746 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.37□□□□□ -1.07
VTN-202ENST00000539746 UBE2L6O14933 153 aa8.37□□□□□ -1.07
VTN-202ENST00000539746 CRYBA4P53673 196 aa8.37□□□□□ -1.07
VTN-202ENST00000539746 FHL2Q14192 279 aa8.37□□□□□ -1.07
VTN-202ENST00000539746 Q6ZN92 141 aa8.37□□□□□ -1.07
VTN-202ENST00000539746 NEXN-AS1Q8NBZ9 246 aa8.37□□□□□ -1.07
VTN-202ENST00000539746 IGHV1-24A0A0C4DH33 117 aa8.36□□□□□ -1.07
VTN-202ENST00000539746 A0A0J9YWU9 116 aa8.36□□□□□ -1.07
VTN-202ENST00000539746 PRM2P04554 102 aa8.36□□□□□ -1.07
VTN-202ENST00000539746 TCTAP57738 103 aa8.36□□□□□ -1.07
VTN-202ENST00000539746 TIRAPP58753 221 aa8.36□□□□□ -1.07
VTN-202ENST00000539746 ZNRF2Q8NHG8 242 aa8.36□□□□□ -1.07
VTN-202ENST00000539746 RPL39LQ96EH5 51 aaKnown RBP8.36□□□□□ -1.07
VTN-202ENST00000539746 TMEM101Q96IK0 257 aa8.36□□□□□ -1.07
VTN-202ENST00000539746 SPANXA1Q9NS26 97 aa8.36□□□□□ -1.07
VTN-202ENST00000539746 TRRAPQ9Y4A5 3859 aa8.35□□□□□ -1.07
VTN-202ENST00000539746 GYPEP15421 78 aa8.35□□□□□ -1.07
VTN-202ENST00000539746 ZNF25P17030 456 aaPredicted RBP8.35□□□□□ -1.07
VTN-202ENST00000539746 UBE2D3P61077 147 aa8.35□□□□□ -1.07
VTN-202ENST00000539746 UBE2D2P62837 147 aa8.35□□□□□ -1.07
VTN-202ENST00000539746 ATP6V0E2Q8NHE4 81 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 150 ms