RNA–Protein interactions for RNA: ENST00000537642.1

USP28-204, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 732 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-204ENST00000537642 TMEM250H0YL14 139 aa9.86□□□□□ -0.83
USP28-204ENST00000537642 LYZL1Q6UWQ5 148 aa9.86□□□□□ -0.83
USP28-204ENST00000537642 KRTAP4-5Q9BYR2 181 aa9.86□□□□□ -0.83
USP28-204ENST00000537642 RNASE7Q9H1E1 156 aaKnown RBP9.86□□□□□ -0.83
USP28-204ENST00000537642 TRAV8-3A0A0A6YYJ7 113 aa9.85□□□□□ -0.83
USP28-204ENST00000537642 MGPP08493 103 aa9.85□□□□□ -0.83
USP28-204ENST00000537642 URGCP-MRPS24S4R325 110 aa9.85□□□□□ -0.83
USP28-204ENST00000537642 TRBV6-8A0A0A6YYG3 113 aa9.84□□□□□ -0.83
USP28-204ENST00000537642 CTRLP40313 264 aa9.84□□□□□ -0.83
USP28-204ENST00000537642 TOR2AQ5JU69 321 aa9.84□□□□□ -0.83
USP28-204ENST00000537642 DNAJC30Q96LL9 226 aa9.84□□□□□ -0.83
USP28-204ENST00000537642 TM2D2Q9BX73 214 aa9.84□□□□□ -0.83
USP28-204ENST00000537642 RPP21Q9H633 154 aaKnown RBP9.84□□□□□ -0.83
USP28-204ENST00000537642 M0QY20 66 aa9.83□□□□□ -0.84
USP28-204ENST00000537642 NTF3P20783 257 aa9.83□□□□□ -0.84
USP28-204ENST00000537642 KRTAP10-1P60331 282 aa9.83□□□□□ -0.84
USP28-204ENST00000537642 SUMO4Q6EEV6 95 aa9.83□□□□□ -0.84
USP28-204ENST00000537642 WDR73Q6P4I2 378 aa9.83□□□□□ -0.84
USP28-204ENST00000537642 MAPKAPK5-AS1Q8N8E1 139 aa9.83□□□□□ -0.84
USP28-204ENST00000537642 CHCHD7Q9BUK0 85 aa9.83□□□□□ -0.84
USP28-204ENST00000537642 KLK12Q9UKR0 248 aa9.83□□□□□ -0.84
USP28-204ENST00000537642 A0A087WX48 190 aa9.82□□□□□ -0.84
USP28-204ENST00000537642 TRGC1P0CF51 173 aa9.82□□□□□ -0.84
USP28-204ENST00000537642 CEBPGP53567 150 aa9.82□□□□□ -0.84
USP28-204ENST00000537642 WFDC2Q14508 124 aa9.82□□□□□ -0.84
USP28-204ENST00000537642 NTM-AS1Q6ZSK4 140 aa9.82□□□□□ -0.84
USP28-204ENST00000537642 Q8N814 137 aa9.82□□□□□ -0.84
USP28-204ENST00000537642 FAM210AQ96ND0 272 aa9.82□□□□□ -0.84
USP28-204ENST00000537642 CNFNQ9BYD5 112 aa9.82□□□□□ -0.84
USP28-204ENST00000537642 EIF5A2Q9GZV4 153 aaKnown RBP9.82□□□□□ -0.84
USP28-204ENST00000537642 TMEM262E9PQX1 116 aa9.81□□□□□ -0.84
USP28-204ENST00000537642 NDUFS6O75380 124 aaKnown RBP9.81□□□□□ -0.84
USP28-204ENST00000537642 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.81□□□□□ -0.84
USP28-204ENST00000537642 GTSF1Q8WW33 167 aa9.81□□□□□ -0.84
USP28-204ENST00000537642 DPH3P1Q9H4G8 78 aa9.81□□□□□ -0.84
USP28-204ENST00000537642 H7C1H1 209 aa9.8□□□□□ -0.84
USP28-204ENST00000537642 GCSHP23434 173 aa9.8□□□□□ -0.84
USP28-204ENST00000537642 ELOBQ15370 118 aa9.8□□□□□ -0.84
USP28-204ENST00000537642 MPV17L2Q567V2 206 aa9.8□□□□□ -0.84
USP28-204ENST00000537642 TMEM97Q5BJF2 176 aa9.8□□□□□ -0.84
USP28-204ENST00000537642 KCNIP4Q6PIL6 250 aa9.8□□□□□ -0.84
USP28-204ENST00000537642 FAM231DQ6ZW35 169 aa9.8□□□□□ -0.84
USP28-204ENST00000537642 NTN5Q8WTR8 489 aaPredicted RBP9.8□□□□□ -0.84
USP28-204ENST00000537642 UBE2WQ96B02 151 aa9.8□□□□□ -0.84
USP28-204ENST00000537642 FAT1Q14517 4588 aa9.79□□□□□ -0.84
USP28-204ENST00000537642 IGLV5-52A0A0A0MRZ9 124 aa9.79□□□□□ -0.84
USP28-204ENST00000537642 LECT2O14960 151 aa9.79□□□□□ -0.84
USP28-204ENST00000537642 GATCO43716 136 aaKnown RBP9.79□□□□□ -0.84
USP28-204ENST00000537642 SRP19P09132 144 aaKnown RBP9.79□□□□□ -0.84
USP28-204ENST00000537642 XGP55808 180 aa9.79□□□□□ -0.84
USP28-204ENST00000537642 TWIST1Q15672 202 aa9.79□□□□□ -0.84
USP28-204ENST00000537642 RASL11AQ6T310 242 aa9.79□□□□□ -0.84
USP28-204ENST00000537642 Q8N1X5 172 aa9.79□□□□□ -0.84
USP28-204ENST00000537642 RMI2Q96E14 147 aa9.79□□□□□ -0.84
USP28-204ENST00000537642 SMIM7Q9BQ49 75 aa9.79□□□□□ -0.84
USP28-204ENST00000537642 CHCHD5Q9BSY4 110 aa9.79□□□□□ -0.84
USP28-204ENST00000537642 IGKV2D-24A0A075B6R9 120 aa9.78□□□□□ -0.84
USP28-204ENST00000537642 ATRAIDQ6UW56 229 aa9.78□□□□□ -0.84
USP28-204ENST00000537642 COX11Q9Y6N1 276 aa9.78□□□□□ -0.84
USP28-204ENST00000537642 TRBV25-1A0A075B6N4 114 aa9.77□□□□□ -0.85
USP28-204ENST00000537642 ENHOQ6UWT2 76 aa9.77□□□□□ -0.85
USP28-204ENST00000537642 LINC01551Q86U37 167 aa9.77□□□□□ -0.85
USP28-204ENST00000537642 C15orf54Q8N8G6 183 aa9.77□□□□□ -0.85
USP28-204ENST00000537642 BAALCQ8WXS3 180 aa9.77□□□□□ -0.85
USP28-204ENST00000537642 NIT2Q9NQR4 276 aa9.77□□□□□ -0.85
USP28-204ENST00000537642 ZNF727A8MUV8 499 aa9.76□□□□□ -0.85
USP28-204ENST00000537642 A8MWL6 223 aa9.76□□□□□ -0.85
USP28-204ENST00000537642 PKIAP61925 76 aa9.76□□□□□ -0.85
USP28-204ENST00000537642 Q0VG73 95 aa9.76□□□□□ -0.85
USP28-204ENST00000537642 GAGE6Q13070 117 aa9.76□□□□□ -0.85
USP28-204ENST00000537642 IQCJQ1A5X6 159 aa9.76□□□□□ -0.85
USP28-204ENST00000537642 CT83Q5H943 113 aa9.76□□□□□ -0.85
USP28-204ENST00000537642 Q8N976 141 aa9.76□□□□□ -0.85
USP28-204ENST00000537642 PGLYRP4Q96LB8 373 aa9.76□□□□□ -0.85
USP28-204ENST00000537642 IGHV1-24A0A0C4DH33 117 aa9.75□□□□□ -0.85
USP28-204ENST00000537642 ANGP03950 147 aaKnown RBP9.75□□□□□ -0.85
USP28-204ENST00000537642 FOXA3P55318 350 aaPredicted RBP9.75□□□□□ -0.85
USP28-204ENST00000537642 TEX261Q6UWH6 196 aa9.75□□□□□ -0.85
USP28-204ENST00000537642 GATD1Q8NB37 220 aa9.75□□□□□ -0.85
USP28-204ENST00000537642 TRAV26-2A0A0B4J265 109 aa9.74□□□□□ -0.85
USP28-204ENST00000537642 CRPP02741 224 aa9.74□□□□□ -0.85
USP28-204ENST00000537642 RBX1P62877 108 aa9.74□□□□□ -0.85
USP28-204ENST00000537642 VPS13BQ7Z7G8 4022 aa9.73□□□□□ -0.85
USP28-204ENST00000537642 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.73□□□□□ -0.85
USP28-204ENST00000537642 C9JQL5 133 aa9.73□□□□□ -0.85
USP28-204ENST00000537642 SMIM15Q7Z3B0 74 aa9.73□□□□□ -0.85
USP28-204ENST00000537642 DEFB104AQ8WTQ1 72 aa9.73□□□□□ -0.85
USP28-204ENST00000537642 C1orf43Q9BWL3 253 aa9.73□□□□□ -0.85
USP28-204ENST00000537642 OSTCQ9NRP0 149 aa9.73□□□□□ -0.85
USP28-204ENST00000537642 SRSF3P84103 164 aaKnown RBP9.72□□□□□ -0.85
USP28-204ENST00000537642 TSKUQ8WUA8 353 aa9.72□□□□□ -0.85
USP28-204ENST00000537642 FRZBQ92765 325 aa9.72□□□□□ -0.85
USP28-204ENST00000537642 RPL39LQ96EH5 51 aaKnown RBP9.72□□□□□ -0.85
USP28-204ENST00000537642 TMEM243Q9BU79 118 aa9.72□□□□□ -0.85
USP28-204ENST00000537642 PRR34Q9NV39 138 aa9.72□□□□□ -0.85
USP28-204ENST00000537642 HIGD1CA8MV81 97 aa9.71□□□□□ -0.86
USP28-204ENST00000537642 HAMPP81172 84 aa9.71□□□□□ -0.86
USP28-204ENST00000537642 MIAQ16674 131 aa9.71□□□□□ -0.86
USP28-204ENST00000537642 FAM74A3Q4VXF1 159 aa9.71□□□□□ -0.86
USP28-204ENST00000537642 CLPSL2Q6UWE3 100 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms