RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 LTAP01374 205 aa8.35□□□□□ -1.07
TNFRSF1A-207ENST00000535958 GAGE6Q13070 117 aa8.35□□□□□ -1.07
TNFRSF1A-207ENST00000535958 LINC00269Q8N2A0 174 aa8.35□□□□□ -1.07
TNFRSF1A-207ENST00000535958 CLRN3Q8NCR9 226 aa8.35□□□□□ -1.07
TNFRSF1A-207ENST00000535958 DERL1Q9BUN8 251 aa8.35□□□□□ -1.07
TNFRSF1A-207ENST00000535958 AP5S1Q9NUS5 200 aa8.35□□□□□ -1.07
TNFRSF1A-207ENST00000535958 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.35□□□□□ -1.07
TNFRSF1A-207ENST00000535958 TRBV6-1A0A0K0K1D8 114 aa8.34□□□□□ -1.07
TNFRSF1A-207ENST00000535958 hDV102S1A0JD36 115 aa8.34□□□□□ -1.07
TNFRSF1A-207ENST00000535958 RBX1P62877 108 aa8.34□□□□□ -1.07
TNFRSF1A-207ENST00000535958 Q6ZRU5 148 aa8.34□□□□□ -1.07
TNFRSF1A-207ENST00000535958 OR10AG1Q8NH19 301 aa8.34□□□□□ -1.07
TNFRSF1A-207ENST00000535958 AP1S3Q96PC3 154 aa8.34□□□□□ -1.07
TNFRSF1A-207ENST00000535958 GIPP09681 153 aaPredicted RBP8.33□□□□□ -1.08
TNFRSF1A-207ENST00000535958 FHITP49789 147 aa8.33□□□□□ -1.08
TNFRSF1A-207ENST00000535958 SSTP61278 116 aa8.33□□□□□ -1.08
TNFRSF1A-207ENST00000535958 PRR27Q6MZM9 219 aa8.33□□□□□ -1.08
TNFRSF1A-207ENST00000535958 IGLV10-54A0A075B6I4 117 aa8.32□□□□□ -1.08
TNFRSF1A-207ENST00000535958 IGHV3-64A0A075B6Q5 118 aa8.32□□□□□ -1.08
TNFRSF1A-207ENST00000535958 IGHV1-24A0A0C4DH33 117 aa8.32□□□□□ -1.08
TNFRSF1A-207ENST00000535958 PFDN1O60925 122 aa8.32□□□□□ -1.08
TNFRSF1A-207ENST00000535958 S100A9P06702 114 aaKnown RBP8.32□□□□□ -1.08
TNFRSF1A-207ENST00000535958 CXCL1P09341 107 aa8.32□□□□□ -1.08
TNFRSF1A-207ENST00000535958 REG3AQ06141 175 aa8.32□□□□□ -1.08
TNFRSF1A-207ENST00000535958 PRR34Q9NV39 138 aa8.32□□□□□ -1.08
TNFRSF1A-207ENST00000535958 VAX2Q9UIW0 290 aa8.32□□□□□ -1.08
TNFRSF1A-207ENST00000535958 MUC21A0A0G2JKD1 596 aa8.31□□□□□ -1.08
TNFRSF1A-207ENST00000535958 MUC21A0A140T8X8 626 aa8.31□□□□□ -1.08
TNFRSF1A-207ENST00000535958 H7C1H1 209 aa8.31□□□□□ -1.08
TNFRSF1A-207ENST00000535958 MGPP08493 103 aa8.31□□□□□ -1.08
TNFRSF1A-207ENST00000535958 WDR73Q6P4I2 378 aa8.31□□□□□ -1.08
TNFRSF1A-207ENST00000535958 C7orf33Q8WU49 177 aa8.31□□□□□ -1.08
TNFRSF1A-207ENST00000535958 TRAV8-4A0A0B4J246 113 aa8.3□□□□□ -1.08
TNFRSF1A-207ENST00000535958 PANO1I0J062 215 aa8.3□□□□□ -1.08
TNFRSF1A-207ENST00000535958 SNAI2O43623 268 aa8.3□□□□□ -1.08
TNFRSF1A-207ENST00000535958 P01737 135 aa8.3□□□□□ -1.08
TNFRSF1A-207ENST00000535958 OR5AL1P0C617 328 aa8.3□□□□□ -1.08
TNFRSF1A-207ENST00000535958 CNBPP62633 177 aaKnown RBP8.3□□□□□ -1.08
TNFRSF1A-207ENST00000535958 SDIM1Q6ZPB5 146 aa8.3□□□□□ -1.08
TNFRSF1A-207ENST00000535958 RNF185Q96GF1 192 aa8.3□□□□□ -1.08
TNFRSF1A-207ENST00000535958 UBE2L6O14933 153 aa8.29□□□□□ -1.08
TNFRSF1A-207ENST00000535958 PAGE4O60829 102 aa8.29□□□□□ -1.08
TNFRSF1A-207ENST00000535958 IQCJQ1A5X6 159 aa8.29□□□□□ -1.08
TNFRSF1A-207ENST00000535958 Q5BKY6 102 aa8.29□□□□□ -1.08
TNFRSF1A-207ENST00000535958 NTM-AS1Q6ZSK4 140 aa8.29□□□□□ -1.08
TNFRSF1A-207ENST00000535958 BAGE2Q86Y30 109 aa8.29□□□□□ -1.08
TNFRSF1A-207ENST00000535958 TPPP3Q9BW30 176 aa8.29□□□□□ -1.08
TNFRSF1A-207ENST00000535958 GZMBP10144 247 aa8.28□□□□□ -1.08
TNFRSF1A-207ENST00000535958 TMEM243Q9BU79 118 aa8.28□□□□□ -1.08
TNFRSF1A-207ENST00000535958 A0A087WYN8 130 aa8.27□□□□□ -1.09
TNFRSF1A-207ENST00000535958 A0A1B0GV50 99 aa8.27□□□□□ -1.09
TNFRSF1A-207ENST00000535958 SCO2A0A1W2PP80 73 aa8.27□□□□□ -1.09
TNFRSF1A-207ENST00000535958 MT1HL1P0DM35 61 aa8.27□□□□□ -1.09
TNFRSF1A-207ENST00000535958 SULT1A2P50226 295 aa8.27□□□□□ -1.09
TNFRSF1A-207ENST00000535958 RAB5CP51148 216 aa8.27□□□□□ -1.09
TNFRSF1A-207ENST00000535958 CIRBPQ14011 172 aaKnown RBP8.27□□□□□ -1.09
TNFRSF1A-207ENST00000535958 SSBP4Q9BWG4 385 aaPredicted RBP8.27□□□□□ -1.09
TNFRSF1A-207ENST00000535958 ARPC5O15511 151 aa8.26□□□□□ -1.09
TNFRSF1A-207ENST00000535958 CHTF8P0CG12 524 aa8.26□□□□□ -1.09
TNFRSF1A-207ENST00000535958 KRTAP26-1Q6PEX3 210 aa8.26□□□□□ -1.09
TNFRSF1A-207ENST00000535958 FAM213BQ8TBF2 198 aa8.26□□□□□ -1.09
TNFRSF1A-207ENST00000535958 SPACA4Q8TDM5 124 aa8.26□□□□□ -1.09
TNFRSF1A-207ENST00000535958 SFT2D1Q8WV19 159 aa8.26□□□□□ -1.09
TNFRSF1A-207ENST00000535958 PHOX2AO14813 284 aa8.25□□□□□ -1.09
TNFRSF1A-207ENST00000535958 NKX2-5P52952 324 aaPredicted RBP8.25□□□□□ -1.09
TNFRSF1A-207ENST00000535958 CFAP161Q6P656 301 aa8.25□□□□□ -1.09
TNFRSF1A-207ENST00000535958 C20orf203Q8NBC4 194 aa8.25□□□□□ -1.09
TNFRSF1A-207ENST00000535958 A0A1B0GUV1 79 aa8.24□□□□□ -1.09
TNFRSF1A-207ENST00000535958 RPS20P60866 119 aaKnown RBP8.24□□□□□ -1.09
TNFRSF1A-207ENST00000535958 CACNG7P62955 275 aa8.24□□□□□ -1.09
TNFRSF1A-207ENST00000535958 SUMO4Q6EEV6 95 aa8.24□□□□□ -1.09
TNFRSF1A-207ENST00000535958 KCNRGQ8N5I3 272 aa8.24□□□□□ -1.09
TNFRSF1A-207ENST00000535958 FER1L6-AS1Q8NA97 138 aa8.24□□□□□ -1.09
TNFRSF1A-207ENST00000535958 GTSF1Q8WW33 167 aa8.24□□□□□ -1.09
TNFRSF1A-207ENST00000535958 MLST8Q9BVC4 326 aa8.24□□□□□ -1.09
TNFRSF1A-207ENST00000535958 KIF25-AS1Q9Y6Z4 181 aa8.24□□□□□ -1.09
TNFRSF1A-207ENST00000535958 IGKV3OR2-268A0A0C4DH90 116 aa8.23□□□□□ -1.09
TNFRSF1A-207ENST00000535958 XKRY2A2RUG3 117 aa8.23□□□□□ -1.09
TNFRSF1A-207ENST00000535958 UMAD1C9J7I0 102 aa8.23□□□□□ -1.09
TNFRSF1A-207ENST00000535958 M0QY20 66 aa8.23□□□□□ -1.09
TNFRSF1A-207ENST00000535958 TRGC1P0CF51 173 aa8.23□□□□□ -1.09
TNFRSF1A-207ENST00000535958 AMTP48728 403 aa8.23□□□□□ -1.09
TNFRSF1A-207ENST00000535958 COTL1Q14019 142 aa8.23□□□□□ -1.09
TNFRSF1A-207ENST00000535958 RASL11AQ6T310 242 aa8.23□□□□□ -1.09
TNFRSF1A-207ENST00000535958 IGLV4-60A0A075B6I1 120 aa8.22□□□□□ -1.09
TNFRSF1A-207ENST00000535958 IGKV2-24A0A0C4DH68 120 aa8.22□□□□□ -1.09
TNFRSF1A-207ENST00000535958 RPL35P42766 123 aaKnown RBP8.22□□□□□ -1.09
TNFRSF1A-207ENST00000535958 MAJINQ3KP22 176 aa8.22□□□□□ -1.09
TNFRSF1A-207ENST00000535958 TMUB2Q71RG4 321 aa8.22□□□□□ -1.09
TNFRSF1A-207ENST00000535958 OR2D3Q8NGH3 330 aa8.22□□□□□ -1.09
TNFRSF1A-207ENST00000535958 PGLYRP4Q96LB8 373 aa8.22□□□□□ -1.09
TNFRSF1A-207ENST00000535958 CYTL1Q9NRR1 136 aa8.22□□□□□ -1.09
TNFRSF1A-207ENST00000535958 PLAC8Q9NZF1 115 aa8.22□□□□□ -1.09
TNFRSF1A-207ENST00000535958 PKIGQ9Y2B9 76 aa8.22□□□□□ -1.09
TNFRSF1A-207ENST00000535958 GAGE12HA6NDE8 117 aa8.21□□□□□ -1.1
TNFRSF1A-207ENST00000535958 NDUFS6O75380 124 aaKnown RBP8.21□□□□□ -1.1
TNFRSF1A-207ENST00000535958 RPS10P46783 165 aaKnown RBP8.21□□□□□ -1.1
TNFRSF1A-207ENST00000535958 COX6A2Q02221 97 aa8.21□□□□□ -1.1
TNFRSF1A-207ENST00000535958 AMMECR1LQ6DCA0 310 aa8.21□□□□□ -1.1
TNFRSF1A-207ENST00000535958 MBD3L1Q8WWY6 194 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms