RNA–Protein interactions for RNA: ENST00000534885.5

TNFRSF1A-205, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best)

Gene TNFRSF1A, Length 2,069 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-205ENST00000534885 LGALS9BQ3B8N2 356 aa14.56□□□□□ -0.08
TNFRSF1A-205ENST00000534885 CHCHD1Q96BP2 118 aaKnown RBP14.56□□□□□ -0.08
TNFRSF1A-205ENST00000534885 VAMP8Q9BV40 100 aa14.56□□□□□ -0.08
TNFRSF1A-205ENST00000534885 PRB2P02812 416 aaPredicted RBP14.55□□□□□ -0.08
TNFRSF1A-205ENST00000534885 FA2HQ7L5A8 372 aa14.55□□□□□ -0.08
TNFRSF1A-205ENST00000534885 OR11H2Q8NH07 326 aa14.55□□□□□ -0.08
TNFRSF1A-205ENST00000534885 OVOL2Q9BRP0 275 aa14.55□□□□□ -0.08
TNFRSF1A-205ENST00000534885 MIEN1Q9BRT3 115 aa14.55□□□□□ -0.08
TNFRSF1A-205ENST00000534885 SMIM9A6NGZ8 99 aa14.54□□□□□ -0.08
TNFRSF1A-205ENST00000534885 M0QY20 66 aa14.54□□□□□ -0.08
TNFRSF1A-205ENST00000534885 RS1O15537 224 aa14.54□□□□□ -0.08
TNFRSF1A-205ENST00000534885 KRTDAPP60985 99 aa14.54□□□□□ -0.08
TNFRSF1A-205ENST00000534885 AP5S1Q9NUS5 200 aa14.54□□□□□ -0.08
TNFRSF1A-205ENST00000534885 MRPL52Q86TS9 123 aaKnown RBP14.54□□□□□ -0.08
TNFRSF1A-205ENST00000534885 Q8N976 141 aa14.54□□□□□ -0.08
TNFRSF1A-205ENST00000534885 RNF183Q96D59 192 aa14.53□□□□□ -0.08
TNFRSF1A-205ENST00000534885 PAM16Q9Y3D7 125 aa14.53□□□□□ -0.08
TNFRSF1A-205ENST00000534885 IGLV2-18A0A075B6J9 118 aa14.53□□□□□ -0.08
TNFRSF1A-205ENST00000534885 GAGE12BA1L429 117 aa14.53□□□□□ -0.08
TNFRSF1A-205ENST00000534885 PRSS47A8MTI9 375 aa14.53□□□□□ -0.08
TNFRSF1A-205ENST00000534885 GAGE7O76087 117 aa14.53□□□□□ -0.08
TNFRSF1A-205ENST00000534885 GAGE12FP0CL80 117 aa14.53□□□□□ -0.08
TNFRSF1A-205ENST00000534885 GAGE12GP0CL81 117 aa14.53□□□□□ -0.08
TNFRSF1A-205ENST00000534885 GAGE12IP0CL82 117 aa14.53□□□□□ -0.08
TNFRSF1A-205ENST00000534885 SUMO2P61956 95 aaKnown RBP14.53□□□□□ -0.08
TNFRSF1A-205ENST00000534885 Q6ZSN1 163 aa14.53□□□□□ -0.08
TNFRSF1A-205ENST00000534885 ZNF479Q96JC4 524 aa14.53□□□□□ -0.08
TNFRSF1A-205ENST00000534885 IGHV1-24A0A0C4DH33 117 aa14.52□□□□□ -0.09
TNFRSF1A-205ENST00000534885 OR4C5Q8NGB2 326 aa14.52□□□□□ -0.09
TNFRSF1A-205ENST00000534885 RHODO00212 210 aa14.51□□□□□ -0.09
TNFRSF1A-205ENST00000534885 IGHV3-53P01767 116 aa14.51□□□□□ -0.09
TNFRSF1A-205ENST00000534885 NXT2Q9NPJ8 142 aaKnown RBP14.51□□□□□ -0.09
TNFRSF1A-205ENST00000534885 DEFB4AO15263 64 aa14.51□□□□□ -0.09
TNFRSF1A-205ENST00000534885 P0DMU3 169 aa14.51□□□□□ -0.09
TNFRSF1A-205ENST00000534885 FAM231AP0DMU4 169 aa14.51□□□□□ -0.09
TNFRSF1A-205ENST00000534885 FAM231CP0DMU5 169 aa14.51□□□□□ -0.09
TNFRSF1A-205ENST00000534885 GAGE1Q13065 139 aa14.51□□□□□ -0.09
TNFRSF1A-205ENST00000534885 C20orf78Q9BR46 151 aa14.51□□□□□ -0.09
TNFRSF1A-205ENST00000534885 SMIM2Q9BVW6 85 aa14.51□□□□□ -0.09
TNFRSF1A-205ENST00000534885 IGHV4-28A0A0C4DH34 117 aa14.5□□□□□ -0.09
TNFRSF1A-205ENST00000534885 PPP1R17O96001 155 aa14.5□□□□□ -0.09
TNFRSF1A-205ENST00000534885 Q8N8P6 123 aa14.5□□□□□ -0.09
TNFRSF1A-205ENST00000534885 TRGV2A0A075B6R0 118 aa14.5□□□□□ -0.09
TNFRSF1A-205ENST00000534885 TRAV4A0A0B4J268 109 aa14.5□□□□□ -0.09
TNFRSF1A-205ENST00000534885 ZFP2Q6ZN57 461 aa14.49□□□□□ -0.09
TNFRSF1A-205ENST00000534885 Q8NAQ8 132 aa14.49□□□□□ -0.09
TNFRSF1A-205ENST00000534885 Q9UF83 564 aa14.49□□□□□ -0.09
TNFRSF1A-205ENST00000534885 KPRPQ5T749 579 aaPredicted RBP14.48□□□□□ -0.09
TNFRSF1A-205ENST00000534885 ST20Q9HBF5 79 aa14.48□□□□□ -0.09
TNFRSF1A-205ENST00000534885 A0A096LNJ9 63 aa14.48□□□□□ -0.09
TNFRSF1A-205ENST00000534885 LINC01546A6NGU7 62 aa14.48□□□□□ -0.09
TNFRSF1A-205ENST00000534885 C3orf79P0CE67 100 aa14.48□□□□□ -0.09
TNFRSF1A-205ENST00000534885 RIPPLY3P57055 190 aa14.48□□□□□ -0.09
TNFRSF1A-205ENST00000534885 NEGR1Q7Z3B1 354 aa14.48□□□□□ -0.09
TNFRSF1A-205ENST00000534885 TMEM70Q9BUB7 260 aa14.48□□□□□ -0.09
TNFRSF1A-205ENST00000534885 EDA2RQ9HAV5 297 aa14.48□□□□□ -0.09
TNFRSF1A-205ENST00000534885 RETNQ9HD89 108 aa14.48□□□□□ -0.09
TNFRSF1A-205ENST00000534885 TMEM238LA0A1B0GVL6 79 aa14.47□□□□□ -0.09
TNFRSF1A-205ENST00000534885 MIFP14174 115 aa14.47□□□□□ -0.09
TNFRSF1A-205ENST00000534885 TRBV6-5A0A0K0K1A5 114 aa14.46□□□□□ -0.09
TNFRSF1A-205ENST00000534885 SDHAF1A6NFY7 115 aa14.46□□□□□ -0.09
TNFRSF1A-205ENST00000534885 DEFB130BP0DP73 79 aa14.46□□□□□ -0.09
TNFRSF1A-205ENST00000534885 DEFB130AP0DP74 79 aa14.46□□□□□ -0.09
TNFRSF1A-205ENST00000534885 H7C1H1 209 aa14.46□□□□□ -0.09
TNFRSF1A-205ENST00000534885 K7EIL1 84 aa14.46□□□□□ -0.09
TNFRSF1A-205ENST00000534885 POLR2KP53803 58 aaKnown RBP14.46□□□□□ -0.09
TNFRSF1A-205ENST00000534885 FAM222AQ5U5X8 452 aa14.46□□□□□ -0.09
TNFRSF1A-205ENST00000534885 DEFB104AQ8WTQ1 72 aa14.46□□□□□ -0.09
TNFRSF1A-205ENST00000534885 LINC00612Q8N6U2 182 aa14.45□□□□□ -0.1
TNFRSF1A-205ENST00000534885 G0S2P27469 103 aa14.44□□□□□ -0.1
TNFRSF1A-205ENST00000534885 SPATA45Q537H7 98 aa14.44□□□□□ -0.1
TNFRSF1A-205ENST00000534885 LINC00173Q6ZV60 143 aa14.44□□□□□ -0.1
TNFRSF1A-205ENST00000534885 DLEU1O43261 78 aa14.43□□□□□ -0.1
TNFRSF1A-205ENST00000534885 RPL32P62910 135 aaKnown RBP14.43□□□□□ -0.1
TNFRSF1A-205ENST00000534885 NEXN-AS1Q8NBZ9 246 aa14.43□□□□□ -0.1
TNFRSF1A-205ENST00000534885 DKK2Q9UBU2 259 aa14.43□□□□□ -0.1
TNFRSF1A-205ENST00000534885 TP53TG1Q9Y2A0 90 aa14.43□□□□□ -0.1
TNFRSF1A-205ENST00000534885 LYRM9A8MSI8 78 aa14.42□□□□□ -0.1
TNFRSF1A-205ENST00000534885 LEPROTL1O95214 131 aa14.42□□□□□ -0.1
TNFRSF1A-205ENST00000534885 ZNF25P17030 456 aaPredicted RBP14.42□□□□□ -0.1
TNFRSF1A-205ENST00000534885 LAGE3Q14657 143 aa14.42□□□□□ -0.1
TNFRSF1A-205ENST00000534885 TRBV27A0A0K0K1C4 114 aa14.42□□□□□ -0.1
TNFRSF1A-205ENST00000534885 HBDP02042 147 aa14.42□□□□□ -0.1
TNFRSF1A-205ENST00000534885 CELA1Q9UNI1 258 aa14.42□□□□□ -0.1
TNFRSF1A-205ENST00000534885 VCYO14598 125 aa14.41□□□□□ -0.1
TNFRSF1A-205ENST00000534885 SBSPONQ8IVN8 264 aa14.41□□□□□ -0.1
TNFRSF1A-205ENST00000534885 SLC25A29Q8N8R3 303 aa14.41□□□□□ -0.1
TNFRSF1A-205ENST00000534885 C18orf15Q96N68 181 aa14.4□□□□□ -0.1
TNFRSF1A-205ENST00000534885 UQCR10Q9UDW1 63 aa14.4□□□□□ -0.1
TNFRSF1A-205ENST00000534885 DNHD1Q96M86 4753 aa14.4□□□□□ -0.1
TNFRSF1A-205ENST00000534885 TENM3Q9P273 2699 aa14.4□□□□□ -0.1
TNFRSF1A-205ENST00000534885 K7EQD1 137 aa14.4□□□□□ -0.1
TNFRSF1A-205ENST00000534885 FCER1GP30273 86 aa14.4□□□□□ -0.1
TNFRSF1A-205ENST00000534885 DEFB121Q5J5C9 76 aa14.4□□□□□ -0.1
TNFRSF1A-205ENST00000534885 CHTOPQ9Y3Y2 248 aaKnown RBP14.4□□□□□ -0.1
TNFRSF1A-205ENST00000534885 TNFRSF18Q9Y5U5 241 aa14.4□□□□□ -0.1
TNFRSF1A-205ENST00000534885 IGLC3P0DOY3 106 aa14.39□□□□□ -0.11
TNFRSF1A-205ENST00000534885 FHL2Q14192 279 aa14.39□□□□□ -0.11
TNFRSF1A-205ENST00000534885 TRGV4A0A0C4DH28 118 aa14.38□□□□□ -0.11
TNFRSF1A-205ENST00000534885 KIR2DL4Q99706 377 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms