RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 IL15RAQ13261 267 aa4.25□□□□□ -1.73
CSDE1-213ENST00000530784 TMEM183BQ1AE95 376 aa4.25□□□□□ -1.73
CSDE1-213ENST00000530784 RGS21Q2M5E4 152 aa4.25□□□□□ -1.73
CSDE1-213ENST00000530784 Q6AWC8 147 aa4.25□□□□□ -1.73
CSDE1-213ENST00000530784 TMEM183AQ8IXX5 376 aa4.25□□□□□ -1.73
CSDE1-213ENST00000530784 OR4C5Q8NGB2 326 aa4.25□□□□□ -1.73
CSDE1-213ENST00000530784 TMEM70Q9BUB7 260 aa4.25□□□□□ -1.73
CSDE1-213ENST00000530784 NAGKQ9UJ70 344 aa4.25□□□□□ -1.73
CSDE1-213ENST00000530784 LENEPQ9Y5L5 61 aa4.25□□□□□ -1.73
CSDE1-213ENST00000530784 DEFA1P59665 94 aa4.24□□□□□ -1.73
CSDE1-213ENST00000530784 DEFA3P59666 94 aa4.24□□□□□ -1.73
CSDE1-213ENST00000530784 TDRG1Q3Y452 100 aa4.24□□□□□ -1.73
CSDE1-213ENST00000530784 MTURNQ8N3F0 131 aa4.24□□□□□ -1.73
CSDE1-213ENST00000530784 Q8N814 137 aa4.24□□□□□ -1.73
CSDE1-213ENST00000530784 Q8N9L7 120 aa4.24□□□□□ -1.73
CSDE1-213ENST00000530784 WDR61Q9GZS3 305 aaKnown RBP4.24□□□□□ -1.73
CSDE1-213ENST00000530784 TRAV8-6A0A0B4J262 113 aa4.23□□□□□ -1.73
CSDE1-213ENST00000530784 TRAV21A0A0B4J279 112 aa4.23□□□□□ -1.73
CSDE1-213ENST00000530784 FAM240BA0A1B0GVZ2 78 aa4.23□□□□□ -1.73
CSDE1-213ENST00000530784 A0A1B0GWB2 263 aa4.23□□□□□ -1.73
CSDE1-213ENST00000530784 LRCOL1A6NCL2 159 aa4.23□□□□□ -1.73
CSDE1-213ENST00000530784 M0R2P5 195 aa4.23□□□□□ -1.73
CSDE1-213ENST00000530784 TAS2R45P59539 299 aa4.23□□□□□ -1.73
CSDE1-213ENST00000530784 KHDC3LQ587J8 217 aa4.23□□□□□ -1.73
CSDE1-213ENST00000530784 LINC01556Q5JQF7 62 aa4.23□□□□□ -1.73
CSDE1-213ENST00000530784 FAM74A1Q5RGS3 127 aa4.23□□□□□ -1.73
CSDE1-213ENST00000530784 CMTM2Q8TAZ6 248 aa4.23□□□□□ -1.73
CSDE1-213ENST00000530784 C7orf33Q8WU49 177 aa4.23□□□□□ -1.73
CSDE1-213ENST00000530784 HYLS1Q96M11 299 aa4.23□□□□□ -1.73
CSDE1-213ENST00000530784 ATP5SQ99766 215 aa4.23□□□□□ -1.73
CSDE1-213ENST00000530784 OR5AC2Q9NZP5 309 aa4.23□□□□□ -1.73
CSDE1-213ENST00000530784 RPH3ALQ9UNE2 315 aa4.23□□□□□ -1.73
CSDE1-213ENST00000530784 IBA57-AS1B1ANH7 110 aa4.22□□□□□ -1.73
CSDE1-213ENST00000530784 F6UZH7 168 aa4.22□□□□□ -1.73
CSDE1-213ENST00000530784 GNRH2O43555 120 aa4.22□□□□□ -1.73
CSDE1-213ENST00000530784 TYMSP04818 313 aa4.22□□□□□ -1.73
CSDE1-213ENST00000530784 PFN1P07737 140 aaKnown RBP4.22□□□□□ -1.73
CSDE1-213ENST00000530784 RHOHQ15669 191 aa4.22□□□□□ -1.73
CSDE1-213ENST00000530784 OR10J3Q5JRS4 329 aa4.22□□□□□ -1.73
CSDE1-213ENST00000530784 KCNS1Q96KK3 526 aa4.22□□□□□ -1.73
CSDE1-213ENST00000530784 PRADC1Q9BSG0 188 aa4.22□□□□□ -1.73
CSDE1-213ENST00000530784 NMES1Q9C002 83 aa4.22□□□□□ -1.73
CSDE1-213ENST00000530784 OTORQ9NRC9 128 aa4.22□□□□□ -1.73
CSDE1-213ENST00000530784 DMBT1Q9UGM3 2413 aaPredicted RBP4.22□□□□□ -1.73
CSDE1-213ENST00000530784 A0A1B0GVG6 124 aa4.21□□□□□ -1.74
CSDE1-213ENST00000530784 TRBV6-4A0A1B0GX49 114 aa4.21□□□□□ -1.74
CSDE1-213ENST00000530784 PGPA6NDG6 321 aa4.21□□□□□ -1.74
CSDE1-213ENST00000530784 SNAPINO95295 136 aa4.21□□□□□ -1.74
CSDE1-213ENST00000530784 SIX6O95475 246 aa4.21□□□□□ -1.74
CSDE1-213ENST00000530784 IGHV3-30P01768 117 aa4.21□□□□□ -1.74
CSDE1-213ENST00000530784 IGHV3-33P01772 117 aa4.21□□□□□ -1.74
CSDE1-213ENST00000530784 IGHV3-30-3P0DP02 117 aa4.21□□□□□ -1.74
CSDE1-213ENST00000530784 IGHV3-30-5P0DP03 117 aa4.21□□□□□ -1.74
CSDE1-213ENST00000530784 HNRNPA3P51991 378 aaKnown RBP4.21□□□□□ -1.74
CSDE1-213ENST00000530784 LELP1Q5T871 98 aa4.21□□□□□ -1.74
CSDE1-213ENST00000530784 GOLT1AQ6ZVE7 132 aa4.21□□□□□ -1.74
CSDE1-213ENST00000530784 LINC01561Q8N1V8 128 aa4.21□□□□□ -1.74
CSDE1-213ENST00000530784 SLC25A29Q8N8R3 303 aa4.21□□□□□ -1.74
CSDE1-213ENST00000530784 ENKURQ8TC29 256 aa4.21□□□□□ -1.74
CSDE1-213ENST00000530784 SCGB1C1Q8TD33 95 aa4.21□□□□□ -1.74
CSDE1-213ENST00000530784 ASB13Q8WXK3 278 aa4.21□□□□□ -1.74
CSDE1-213ENST00000530784 NDFIP1Q9BT67 221 aa4.21□□□□□ -1.74
CSDE1-213ENST00000530784 TREM1Q9NP99 234 aa4.21□□□□□ -1.74
CSDE1-213ENST00000530784 TRAV8-1A0A0A6YYK1 113 aa4.2□□□□□ -1.74
CSDE1-213ENST00000530784 IGHV3-73A0A0B4J1V6 119 aa4.2□□□□□ -1.74
CSDE1-213ENST00000530784 A0A1W2PPV4 95 aa4.2□□□□□ -1.74
CSDE1-213ENST00000530784 EIF3GO75821 320 aaKnown RBP eCLIP4.2□□□□□ -1.74
CSDE1-213ENST00000530784 C1QBP02746 253 aa4.2□□□□□ -1.74
CSDE1-213ENST00000530784 PET100P0DJ07 73 aa4.2□□□□□ -1.74
CSDE1-213ENST00000530784 GNG5P63218 68 aa4.2□□□□□ -1.74
CSDE1-213ENST00000530784 CFAP126Q5VTH2 177 aa4.2□□□□□ -1.74
CSDE1-213ENST00000530784 ARL6IP6Q8N6S5 226 aa4.2□□□□□ -1.74
CSDE1-213ENST00000530784 ATP6V0E2Q8NHE4 81 aa4.2□□□□□ -1.74
CSDE1-213ENST00000530784 MARVELD1Q9BSK0 173 aa4.2□□□□□ -1.74
CSDE1-213ENST00000530784 SMIM3Q9BZL3 60 aa4.2□□□□□ -1.74
CSDE1-213ENST00000530784 HSPB11Q9Y547 144 aa4.2□□□□□ -1.74
CSDE1-213ENST00000530784 FAT1Q14517 4588 aa4.2□□□□□ -1.74
CSDE1-213ENST00000530784 A0A0J9YXY3 114 aa4.19□□□□□ -1.74
CSDE1-213ENST00000530784 SERTM2A0A1B0GWG4 89 aa4.19□□□□□ -1.74
CSDE1-213ENST00000530784 RS1O15537 224 aa4.19□□□□□ -1.74
CSDE1-213ENST00000530784 MGST1P10620 155 aaKnown RBP4.19□□□□□ -1.74
CSDE1-213ENST00000530784 ACOT6Q3I5F7 207 aaPredicted RBP4.19□□□□□ -1.74
CSDE1-213ENST00000530784 DPPA3Q6W0C5 159 aa4.19□□□□□ -1.74
CSDE1-213ENST00000530784 PPP1R1CQ8WVI7 109 aa4.19□□□□□ -1.74
CSDE1-213ENST00000530784 TVP23CQ96ET8 276 aa4.19□□□□□ -1.74
CSDE1-213ENST00000530784 TMEM101Q96IK0 257 aa4.19□□□□□ -1.74
CSDE1-213ENST00000530784 GTSF1LQ9H1H1 148 aa4.19□□□□□ -1.74
CSDE1-213ENST00000530784 SH3BGRL3Q9H299 93 aa4.19□□□□□ -1.74
CSDE1-213ENST00000530784 MYCBP2O75592 4640 aa4.18□□□□□ -1.74
CSDE1-213ENST00000530784 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.18□□□□□ -1.74
CSDE1-213ENST00000530784 TRAV8-3A0A0A6YYJ7 113 aa4.18□□□□□ -1.74
CSDE1-213ENST00000530784 K7EQM0 130 aa4.18□□□□□ -1.74
CSDE1-213ENST00000530784 TAAR5O14804 337 aa4.18□□□□□ -1.74
CSDE1-213ENST00000530784 LECT2O14960 151 aa4.18□□□□□ -1.74
CSDE1-213ENST00000530784 MPC2O95563 127 aa4.18□□□□□ -1.74
CSDE1-213ENST00000530784 GCGP01275 180 aa4.18□□□□□ -1.74
CSDE1-213ENST00000530784 TCRAP04437 139 aa4.18□□□□□ -1.74
CSDE1-213ENST00000530784 RPL12P30050 165 aaKnown RBP4.18□□□□□ -1.74
CSDE1-213ENST00000530784 H2BFSP57053 126 aa4.18□□□□□ -1.74
CSDE1-213ENST00000530784 RAB2AP61019 212 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms