RNA–Protein interactions for RNA: ENST00000530404.5

TSPAN4-219, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-219ENST00000530404 RPL37AP61513 92 aaKnown RBP13.4□□□□□ -0.26
TSPAN4-219ENST00000530404 SPANXN1Q5VSR9 72 aa13.4□□□□□ -0.26
TSPAN4-219ENST00000530404 OXTP01178 125 aa13.39□□□□□ -0.27
TSPAN4-219ENST00000530404 HNRNPA3P51991 378 aaKnown RBP13.39□□□□□ -0.27
TSPAN4-219ENST00000530404 GAGE6Q13070 117 aa13.39□□□□□ -0.27
TSPAN4-219ENST00000530404 SERTAD4-AS1Q5TG53 156 aa13.39□□□□□ -0.27
TSPAN4-219ENST00000530404 BAGE2Q86Y30 109 aa13.39□□□□□ -0.27
TSPAN4-219ENST00000530404 FAM213BQ8TBF2 198 aa13.39□□□□□ -0.27
TSPAN4-219ENST00000530404 SFT2D1Q8WV19 159 aa13.39□□□□□ -0.27
TSPAN4-219ENST00000530404 MLST8Q9BVC4 326 aa13.39□□□□□ -0.27
TSPAN4-219ENST00000530404 CXCL1P09341 107 aa13.38□□□□□ -0.27
TSPAN4-219ENST00000530404 SSBP4Q9BWG4 385 aaPredicted RBP13.38□□□□□ -0.27
TSPAN4-219ENST00000530404 BATF3Q9NR55 127 aa13.38□□□□□ -0.27
TSPAN4-219ENST00000530404 MIAQ16674 131 aa13.37□□□□□ -0.27
TSPAN4-219ENST00000530404 DERL1Q9BUN8 251 aa13.37□□□□□ -0.27
TSPAN4-219ENST00000530404 PANO1I0J062 215 aa13.36□□□□□ -0.27
TSPAN4-219ENST00000530404 PFDN1O60925 122 aa13.36□□□□□ -0.27
TSPAN4-219ENST00000530404 S100A9P06702 114 aaKnown RBP13.36□□□□□ -0.27
TSPAN4-219ENST00000530404 OR5AL1P0C617 328 aa13.36□□□□□ -0.27
TSPAN4-219ENST00000530404 RBX1P62877 108 aa13.36□□□□□ -0.27
TSPAN4-219ENST00000530404 LINC00269Q8N2A0 174 aa13.36□□□□□ -0.27
TSPAN4-219ENST00000530404 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.36□□□□□ -0.27
TSPAN4-219ENST00000530404 DAZAP1Q96EP5 407 aaKnown RBP13.36□□□□□ -0.27
TSPAN4-219ENST00000530404 KIF25-AS1Q9Y6Z4 181 aa13.36□□□□□ -0.27
TSPAN4-219ENST00000530404 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.36□□□□□ -0.27
TSPAN4-219ENST00000530404 KRTAP26-1Q6PEX3 210 aa13.35□□□□□ -0.27
TSPAN4-219ENST00000530404 MBD3L1Q8WWY6 194 aa13.35□□□□□ -0.27
TSPAN4-219ENST00000530404 VAX2Q9UIW0 290 aa13.35□□□□□ -0.27
TSPAN4-219ENST00000530404 SMIM17P0DL12 118 aa13.34□□□□□ -0.27
TSPAN4-219ENST00000530404 PKIAP61925 76 aa13.34□□□□□ -0.27
TSPAN4-219ENST00000530404 C9orf163Q8N9P6 203 aa13.34□□□□□ -0.27
TSPAN4-219ENST00000530404 PRR34Q9NV39 138 aa13.34□□□□□ -0.27
TSPAN4-219ENST00000530404 IGLV10-54A0A075B6I4 117 aa13.33□□□□□ -0.28
TSPAN4-219ENST00000530404 TRBV25-1A0A075B6N4 114 aa13.33□□□□□ -0.28
TSPAN4-219ENST00000530404 MGPP08493 103 aa13.33□□□□□ -0.28
TSPAN4-219ENST00000530404 GZMBP10144 247 aa13.33□□□□□ -0.28
TSPAN4-219ENST00000530404 KCNRGQ8N5I3 272 aa13.33□□□□□ -0.28
TSPAN4-219ENST00000530404 TMEM97Q5BJF2 176 aa13.32□□□□□ -0.28
TSPAN4-219ENST00000530404 DGAT2L7PQ6IED9 249 aa13.32□□□□□ -0.28
TSPAN4-219ENST00000530404 TMUB2Q71RG4 321 aa13.32□□□□□ -0.28
TSPAN4-219ENST00000530404 AP1S3Q96PC3 154 aa13.32□□□□□ -0.28
TSPAN4-219ENST00000530404 TPPP3Q9BW30 176 aa13.31□□□□□ -0.28
TSPAN4-219ENST00000530404 PLA2G2DQ9UNK4 145 aa13.31□□□□□ -0.28
TSPAN4-219ENST00000530404 RPL35P42766 123 aaKnown RBP13.3□□□□□ -0.28
TSPAN4-219ENST00000530404 IGHV1-24A0A0C4DH33 117 aa13.29□□□□□ -0.28
TSPAN4-219ENST00000530404 UMAD1C9J7I0 102 aa13.29□□□□□ -0.28
TSPAN4-219ENST00000530404 H2AFB1P0C5Y9 115 aa13.29□□□□□ -0.28
TSPAN4-219ENST00000530404 REG3AQ06141 175 aa13.29□□□□□ -0.28
TSPAN4-219ENST00000530404 ZNF345Q14585 488 aa13.29□□□□□ -0.28
TSPAN4-219ENST00000530404 IQCJQ1A5X6 159 aa13.29□□□□□ -0.28
TSPAN4-219ENST00000530404 SUMO4Q6EEV6 95 aa13.29□□□□□ -0.28
TSPAN4-219ENST00000530404 M0QY20 66 aa13.28□□□□□ -0.28
TSPAN4-219ENST00000530404 SDIM1Q6ZPB5 146 aa13.28□□□□□ -0.28
TSPAN4-219ENST00000530404 C20orf203Q8NBC4 194 aa13.28□□□□□ -0.28
TSPAN4-219ENST00000530404 RAB5CP51148 216 aa13.27□□□□□ -0.29
TSPAN4-219ENST00000530404 CCL20P78556 96 aa13.27□□□□□ -0.29
TSPAN4-219ENST00000530404 RGS21Q2M5E4 152 aa13.27□□□□□ -0.29
TSPAN4-219ENST00000530404 GFRA4Q9GZZ7 299 aa13.27□□□□□ -0.29
TSPAN4-219ENST00000530404 IGLV4-60A0A075B6I1 120 aa13.26□□□□□ -0.29
TSPAN4-219ENST00000530404 hDV102S1A0JD36 115 aa13.26□□□□□ -0.29
TSPAN4-219ENST00000530404 BCL2L11O43521 198 aa13.26□□□□□ -0.29
TSPAN4-219ENST00000530404 IGLC6P0CF74 106 aa13.26□□□□□ -0.29
TSPAN4-219ENST00000530404 NKX2-5P52952 324 aaPredicted RBP13.26□□□□□ -0.29
TSPAN4-219ENST00000530404 FER1L6-AS1Q8NA97 138 aa13.26□□□□□ -0.29
TSPAN4-219ENST00000530404 GNG13Q9P2W3 67 aa13.26□□□□□ -0.29
TSPAN4-219ENST00000530404 KANTRA0A1W2PQU2 76 aa13.25□□□□□ -0.29
TSPAN4-219ENST00000530404 CENPWQ5EE01 88 aa13.25□□□□□ -0.29
TSPAN4-219ENST00000530404 OR2D3Q8NGH3 330 aa13.25□□□□□ -0.29
TSPAN4-219ENST00000530404 CLRN3Q8NCR9 226 aa13.24□□□□□ -0.29
TSPAN4-219ENST00000530404 TNXBP22105 4242 aa13.23□□□□□ -0.29
TSPAN4-219ENST00000530404 RAB19A4D1S5 217 aa13.23□□□□□ -0.29
TSPAN4-219ENST00000530404 H7C1H1 209 aa13.23□□□□□ -0.29
TSPAN4-219ENST00000530404 SLPIP03973 132 aa13.23□□□□□ -0.29
TSPAN4-219ENST00000530404 CHTF8P0CG12 524 aa13.23□□□□□ -0.29
TSPAN4-219ENST00000530404 C11orf52Q96A22 123 aa13.23□□□□□ -0.29
TSPAN4-219ENST00000530404 TMEM243Q9BU79 118 aa13.23□□□□□ -0.29
TSPAN4-219ENST00000530404 A0A0D9SG52 128 aa13.22□□□□□ -0.29
TSPAN4-219ENST00000530404 HMSDA8MTL9 139 aa13.22□□□□□ -0.29
TSPAN4-219ENST00000530404 CNBPP62633 177 aaKnown RBP13.22□□□□□ -0.29
TSPAN4-219ENST00000530404 MANBALQ9NQG1 85 aa13.22□□□□□ -0.29
TSPAN4-219ENST00000530404 C19orf71A6NCJ1 209 aa13.21□□□□□ -0.29
TSPAN4-219ENST00000530404 MT1HL1P0DM35 61 aa13.21□□□□□ -0.29
TSPAN4-219ENST00000530404 RPS20P60866 119 aaKnown RBP13.21□□□□□ -0.29
TSPAN4-219ENST00000530404 CACNG7P62955 275 aa13.21□□□□□ -0.29
TSPAN4-219ENST00000530404 RASL11AQ6T310 242 aa13.21□□□□□ -0.29
TSPAN4-219ENST00000530404 TRAV8-4A0A0B4J246 113 aa13.2□□□□□ -0.3
TSPAN4-219ENST00000530404 P01737 135 aa13.2□□□□□ -0.3
TSPAN4-219ENST00000530404 CIRBPQ14011 172 aaKnown RBP13.2□□□□□ -0.3
TSPAN4-219ENST00000530404 DPH3Q96FX2 82 aa13.2□□□□□ -0.3
TSPAN4-219ENST00000530404 IGHV3-64A0A075B6Q5 118 aa13.19□□□□□ -0.3
TSPAN4-219ENST00000530404 A0A1B0GUV1 79 aa13.19□□□□□ -0.3
TSPAN4-219ENST00000530404 LYZL1Q6UWQ5 148 aa13.19□□□□□ -0.3
TSPAN4-219ENST00000530404 AP5S1Q9NUS5 200 aa13.19□□□□□ -0.3
TSPAN4-219ENST00000530404 A0A087WYN8 130 aa13.18□□□□□ -0.3
TSPAN4-219ENST00000530404 UBE2L6O14933 153 aa13.18□□□□□ -0.3
TSPAN4-219ENST00000530404 DPH3P1Q9H4G8 78 aa13.18□□□□□ -0.3
TSPAN4-219ENST00000530404 IGKV3OR2-268A0A0C4DH90 116 aa13.17□□□□□ -0.3
TSPAN4-219ENST00000530404 NTF3P20783 257 aa13.17□□□□□ -0.3
TSPAN4-219ENST00000530404 GNG4P50150 75 aa13.17□□□□□ -0.3
TSPAN4-219ENST00000530404 PGLYRP4Q96LB8 373 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms