RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 TRBV6-8A0A0A6YYG3 113 aa22.01■■□□□ 1.11
SSSCA1-205ENST00000527920 NUDT10Q8NFP7 164 aa22■■□□□ 1.11
SSSCA1-205ENST00000527920 NUDT11Q96G61 164 aa22■■□□□ 1.11
SSSCA1-205ENST00000527920 COX11Q9Y6N1 276 aa22■■□□□ 1.11
SSSCA1-205ENST00000527920 A0A087WX48 190 aa21.99■■□□□ 1.11
SSSCA1-205ENST00000527920 ELOBQ15370 118 aa21.99■■□□□ 1.11
SSSCA1-205ENST00000527920 TMEM97Q5BJF2 176 aa21.98■■□□□ 1.11
SSSCA1-205ENST00000527920 WDR73Q6P4I2 378 aa21.98■■□□□ 1.11
SSSCA1-205ENST00000527920 KCNIP4Q6PIL6 250 aa21.98■■□□□ 1.11
SSSCA1-205ENST00000527920 Q8N1X5 172 aa21.98■■□□□ 1.11
SSSCA1-205ENST00000527920 Q8N814 137 aa21.98■■□□□ 1.11
SSSCA1-205ENST00000527920 KRTAP4-5Q9BYR2 181 aa21.98■■□□□ 1.11
SSSCA1-205ENST00000527920 CTRLP40313 264 aa21.97■■□□□ 1.11
SSSCA1-205ENST00000527920 OCC1Q8TAD7 63 aa21.97■■□□□ 1.11
SSSCA1-205ENST00000527920 RMI2Q96E14 147 aa21.97■■□□□ 1.11
SSSCA1-205ENST00000527920 H7C1H1 209 aa21.96■■□□□ 1.11
SSSCA1-205ENST00000527920 K7EN84 100 aa21.96■■□□□ 1.11
SSSCA1-205ENST00000527920 TRGC1P0CF51 173 aa21.96■■□□□ 1.11
SSSCA1-205ENST00000527920 LYZL1Q6UWQ5 148 aa21.96■■□□□ 1.11
SSSCA1-205ENST00000527920 RPP21Q9H633 154 aaKnown RBP21.96■■□□□ 1.11
SSSCA1-205ENST00000527920 NDUFS6O75380 124 aaKnown RBP21.95■■□□□ 1.1
SSSCA1-205ENST00000527920 GCSHP23434 173 aa21.95■■□□□ 1.1
SSSCA1-205ENST00000527920 KRTAP10-1P60331 282 aa21.95■■□□□ 1.1
SSSCA1-205ENST00000527920 CNFNQ9BYD5 112 aa21.95■■□□□ 1.1
SSSCA1-205ENST00000527920 ABCA13Q86UQ4 5058 aa21.95■■□□□ 1.1
SSSCA1-205ENST00000527920 M0QY20 66 aa21.94■■□□□ 1.1
SSSCA1-205ENST00000527920 NKX2-5P52952 324 aaPredicted RBP21.94■■□□□ 1.1
SSSCA1-205ENST00000527920 PKIAP61925 76 aa21.94■■□□□ 1.1
SSSCA1-205ENST00000527920 DNAJC30Q96LL9 226 aa21.94■■□□□ 1.1
SSSCA1-205ENST00000527920 KLK12Q9UKR0 248 aa21.94■■□□□ 1.1
SSSCA1-205ENST00000527920 IGLV5-52A0A0A0MRZ9 124 aa21.93■■□□□ 1.1
SSSCA1-205ENST00000527920 A0A1B0GVG6 124 aa21.93■■□□□ 1.1
SSSCA1-205ENST00000527920 MGPP08493 103 aa21.92■■□□□ 1.1
SSSCA1-205ENST00000527920 RNASE7Q9H1E1 156 aaKnown RBP21.92■■□□□ 1.1
SSSCA1-205ENST00000527920 NTF3P20783 257 aa21.91■■□□□ 1.1
SSSCA1-205ENST00000527920 SUMO4Q6EEV6 95 aa21.9■■□□□ 1.1
SSSCA1-205ENST00000527920 ATRAIDQ6UW56 229 aa21.9■■□□□ 1.1
SSSCA1-205ENST00000527920 DPH3P1Q9H4G8 78 aa21.9■■□□□ 1.1
SSSCA1-205ENST00000527920 Q0VG73 95 aa21.89■■□□□ 1.09
SSSCA1-205ENST00000527920 TMEM262E9PQX1 116 aa21.88■■□□□ 1.09
SSSCA1-205ENST00000527920 XGP55808 180 aa21.88■■□□□ 1.09
SSSCA1-205ENST00000527920 NTM-AS1Q6ZSK4 140 aa21.88■■□□□ 1.09
SSSCA1-205ENST00000527920 FAM231DQ6ZW35 169 aa21.88■■□□□ 1.09
SSSCA1-205ENST00000527920 UBE2WQ96B02 151 aa21.88■■□□□ 1.09
SSSCA1-205ENST00000527920 WFDC2Q14508 124 aa21.87■■□□□ 1.09
SSSCA1-205ENST00000527920 CHCHD5Q9BSY4 110 aa21.87■■□□□ 1.09
SSSCA1-205ENST00000527920 RASL11AQ6T310 242 aa21.86■■□□□ 1.09
SSSCA1-205ENST00000527920 MPV17L2Q567V2 206 aa21.85■■□□□ 1.09
SSSCA1-205ENST00000527920 FAM210AQ96ND0 272 aa21.85■■□□□ 1.09
SSSCA1-205ENST00000527920 EIF5A2Q9GZV4 153 aaKnown RBP21.85■■□□□ 1.09
SSSCA1-205ENST00000527920 TRBV25-1A0A075B6N4 114 aa21.84■■□□□ 1.09
SSSCA1-205ENST00000527920 IGKV2D-24A0A075B6R9 120 aa21.84■■□□□ 1.09
SSSCA1-205ENST00000527920 IQCJQ1A5X6 159 aa21.84■■□□□ 1.09
SSSCA1-205ENST00000527920 TWIST1Q15672 202 aa21.83■■□□□ 1.09
SSSCA1-205ENST00000527920 TMEM70Q9BUB7 260 aa21.83■■□□□ 1.09
SSSCA1-205ENST00000527920 CT83Q5H943 113 aa21.82■■□□□ 1.08
SSSCA1-205ENST00000527920 GTSF1Q8WW33 167 aa21.82■■□□□ 1.08
SSSCA1-205ENST00000527920 NIT2Q9NQR4 276 aa21.82■■□□□ 1.08
SSSCA1-205ENST00000527920 GATCO43716 136 aaKnown RBP21.81■■□□□ 1.08
SSSCA1-205ENST00000527920 FRZBQ92765 325 aa21.81■■□□□ 1.08
SSSCA1-205ENST00000527920 SMIM7Q9BQ49 75 aa21.81■■□□□ 1.08
SSSCA1-205ENST00000527920 IGHV1-24A0A0C4DH33 117 aa21.8■■□□□ 1.08
SSSCA1-205ENST00000527920 A8MWL6 223 aa21.8■■□□□ 1.08
SSSCA1-205ENST00000527920 CEBPGP53567 150 aa21.8■■□□□ 1.08
SSSCA1-205ENST00000527920 ENHOQ6UWT2 76 aa21.8■■□□□ 1.08
SSSCA1-205ENST00000527920 C15orf54Q8N8G6 183 aa21.8■■□□□ 1.08
SSSCA1-205ENST00000527920 BAALCQ8WXS3 180 aa21.8■■□□□ 1.08
SSSCA1-205ENST00000527920 LECT2O14960 151 aa21.79■■□□□ 1.08
SSSCA1-205ENST00000527920 CRPP02741 224 aa21.79■■□□□ 1.08
SSSCA1-205ENST00000527920 ANGP03950 147 aaKnown RBP21.79■■□□□ 1.08
SSSCA1-205ENST00000527920 Q8N976 141 aa21.79■■□□□ 1.08
SSSCA1-205ENST00000527920 PGLYRP4Q96LB8 373 aa21.79■■□□□ 1.08
SSSCA1-205ENST00000527920 C1orf43Q9BWL3 253 aa21.78■■□□□ 1.08
SSSCA1-205ENST00000527920 FOXA3P55318 350 aaPredicted RBP21.77■■□□□ 1.08
SSSCA1-205ENST00000527920 LINC01551Q86U37 167 aa21.77■■□□□ 1.08
SSSCA1-205ENST00000527920 RBX1P62877 108 aa21.76■■□□□ 1.07
SSSCA1-205ENST00000527920 PRR34Q9NV39 138 aa21.76■■□□□ 1.07
SSSCA1-205ENST00000527920 SRP19P09132 144 aaKnown RBP21.75■■□□□ 1.07
SSSCA1-205ENST00000527920 MIAQ16674 131 aa21.75■■□□□ 1.07
SSSCA1-205ENST00000527920 SMIM15Q7Z3B0 74 aa21.75■■□□□ 1.07
SSSCA1-205ENST00000527920 GAGE6Q13070 117 aa21.74■■□□□ 1.07
SSSCA1-205ENST00000527920 ZNF727A8MUV8 499 aa21.73■■□□□ 1.07
SSSCA1-205ENST00000527920 EPM2AB3EWF7 344 aa21.72■■□□□ 1.07
SSSCA1-205ENST00000527920 GATD1Q8NB37 220 aa21.72■■□□□ 1.07
SSSCA1-205ENST00000527920 TMEM243Q9BU79 118 aa21.72■■□□□ 1.07
SSSCA1-205ENST00000527920 GFRA4Q9GZZ7 299 aa21.71■■□□□ 1.07
SSSCA1-205ENST00000527920 OSTCQ9NRP0 149 aa21.71■■□□□ 1.07
SSSCA1-205ENST00000527920 IGLV2-33A0A075B6J2 118 aaPredicted RBP21.7■■□□□ 1.06
SSSCA1-205ENST00000527920 FAM231BA6NCW3 169 aa21.7■■□□□ 1.06
SSSCA1-205ENST00000527920 TEX261Q6UWH6 196 aa21.7■■□□□ 1.06
SSSCA1-205ENST00000527920 TSKUQ8WUA8 353 aa21.7■■□□□ 1.06
SSSCA1-205ENST00000527920 COTL1Q14019 142 aa21.69■■□□□ 1.06
SSSCA1-205ENST00000527920 A0A1B0GUV1 79 aa21.68■■□□□ 1.06
SSSCA1-205ENST00000527920 C14orf177Q52M58 125 aa21.68■■□□□ 1.06
SSSCA1-205ENST00000527920 FAM74A3Q4VXF1 159 aa21.67■■□□□ 1.06
SSSCA1-205ENST00000527920 Q6ZSA8 131 aa21.67■■□□□ 1.06
SSSCA1-205ENST00000527920 LINC00269Q8N2A0 174 aa21.67■■□□□ 1.06
SSSCA1-205ENST00000527920 BORCS7Q96B45 105 aa21.67■■□□□ 1.06
SSSCA1-205ENST00000527920 FAT1Q14517 4588 aa21.67■■□□□ 1.06
SSSCA1-205ENST00000527920 TRAV26-2A0A0B4J265 109 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms