RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 PDE6DO43924 150 aa6.92□□□□□ -1.3
CPSF1-203ENST00000527916 IGLV2-8P01709 118 aa6.92□□□□□ -1.3
CPSF1-203ENST00000527916 RPS20P60866 119 aaKnown RBP6.92□□□□□ -1.3
CPSF1-203ENST00000527916 SLC51BQ86UW2 128 aa6.92□□□□□ -1.3
CPSF1-203ENST00000527916 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.92□□□□□ -1.3
CPSF1-203ENST00000527916 CHAC1Q9BUX1 264 aa6.92□□□□□ -1.3
CPSF1-203ENST00000527916 KIF25-AS1Q9Y6Z4 181 aa6.92□□□□□ -1.3
CPSF1-203ENST00000527916 PKHD1L1Q86WI1 4243 aa6.92□□□□□ -1.3
CPSF1-203ENST00000527916 A0A087WX48 190 aa6.91□□□□□ -1.3
CPSF1-203ENST00000527916 C19orf71A6NCJ1 209 aa6.91□□□□□ -1.3
CPSF1-203ENST00000527916 IFNA1P01562 189 aa6.91□□□□□ -1.3
CPSF1-203ENST00000527916 TAGLN2P37802 199 aaKnown RBP6.91□□□□□ -1.3
CPSF1-203ENST00000527916 KRTAP10-4P60372 401 aaPredicted RBP6.91□□□□□ -1.3
CPSF1-203ENST00000527916 MEF2BQ02080 365 aaPredicted RBP6.91□□□□□ -1.3
CPSF1-203ENST00000527916 Q0VG73 95 aa6.91□□□□□ -1.3
CPSF1-203ENST00000527916 ZNF56Q15929 161 aa6.91□□□□□ -1.3
CPSF1-203ENST00000527916 TMEM97Q5BJF2 176 aa6.91□□□□□ -1.3
CPSF1-203ENST00000527916 CENPWQ5EE01 88 aa6.91□□□□□ -1.3
CPSF1-203ENST00000527916 KCNIP4Q6PIL6 250 aa6.91□□□□□ -1.3
CPSF1-203ENST00000527916 ATRAIDQ6UW56 229 aa6.91□□□□□ -1.3
CPSF1-203ENST00000527916 NEXN-AS1Q8NBZ9 246 aa6.91□□□□□ -1.3
CPSF1-203ENST00000527916 DAZAP1Q96EP5 407 aaKnown RBP6.91□□□□□ -1.3
CPSF1-203ENST00000527916 DERL1Q9BUN8 251 aa6.91□□□□□ -1.3
CPSF1-203ENST00000527916 BIN3Q9NQY0 253 aa6.91□□□□□ -1.3
CPSF1-203ENST00000527916 VAX2Q9UIW0 290 aa6.91□□□□□ -1.3
CPSF1-203ENST00000527916 KLK12Q9UKR0 248 aa6.91□□□□□ -1.3
CPSF1-203ENST00000527916 XKRY2A2RUG3 117 aa6.9□□□□□ -1.3
CPSF1-203ENST00000527916 RBFOX3A6NFN3 312 aa6.9□□□□□ -1.3
CPSF1-203ENST00000527916 F2Z2F3 143 aa6.9□□□□□ -1.3
CPSF1-203ENST00000527916 IGLC6P0CF74 106 aa6.9□□□□□ -1.3
CPSF1-203ENST00000527916 SMIM17P0DL12 118 aa6.9□□□□□ -1.3
CPSF1-203ENST00000527916 PKIAP61925 76 aa6.9□□□□□ -1.3
CPSF1-203ENST00000527916 WFDC2Q14508 124 aa6.9□□□□□ -1.3
CPSF1-203ENST00000527916 Q8N976 141 aa6.9□□□□□ -1.3
CPSF1-203ENST00000527916 AP1S3Q96PC3 154 aa6.9□□□□□ -1.3
CPSF1-203ENST00000527916 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.89□□□□□ -1.31
CPSF1-203ENST00000527916 MUC21A0A0G2JKD1 596 aa6.89□□□□□ -1.31
CPSF1-203ENST00000527916 MUC21A0A140T8X8 626 aa6.89□□□□□ -1.31
CPSF1-203ENST00000527916 RAB19A4D1S5 217 aa6.89□□□□□ -1.31
CPSF1-203ENST00000527916 F5H697 171 aa6.89□□□□□ -1.31
CPSF1-203ENST00000527916 BCL2P10415 239 aa6.89□□□□□ -1.31
CPSF1-203ENST00000527916 GNG4P50150 75 aa6.89□□□□□ -1.31
CPSF1-203ENST00000527916 CACNG7P62955 275 aa6.89□□□□□ -1.31
CPSF1-203ENST00000527916 WDR73Q6P4I2 378 aa6.89□□□□□ -1.31
CPSF1-203ENST00000527916 Q6ZNX1 250 aa6.89□□□□□ -1.31
CPSF1-203ENST00000527916 FER1L6-AS1Q8NA97 138 aa6.89□□□□□ -1.31
CPSF1-203ENST00000527916 OR2D3Q8NGH3 330 aa6.89□□□□□ -1.31
CPSF1-203ENST00000527916 BAALCQ8WXS3 180 aa6.89□□□□□ -1.31
CPSF1-203ENST00000527916 DNAJC30Q96LL9 226 aa6.89□□□□□ -1.31
CPSF1-203ENST00000527916 MED9Q9NWA0 146 aa6.89□□□□□ -1.31
CPSF1-203ENST00000527916 IGKV2D-24A0A075B6R9 120 aa6.88□□□□□ -1.31
CPSF1-203ENST00000527916 TMEM262E9PQX1 116 aa6.88□□□□□ -1.31
CPSF1-203ENST00000527916 NTM-AS1Q6ZSK4 140 aa6.88□□□□□ -1.31
CPSF1-203ENST00000527916 CIRBP-AS1Q8TBR5 109 aa6.88□□□□□ -1.31
CPSF1-203ENST00000527916 UBE2WQ96B02 151 aa6.88□□□□□ -1.31
CPSF1-203ENST00000527916 TRBV20OR9-2A0A075B6H5 130 aa6.87□□□□□ -1.31
CPSF1-203ENST00000527916 H7C1H1 209 aa6.87□□□□□ -1.31
CPSF1-203ENST00000527916 M0QY20 66 aa6.87□□□□□ -1.31
CPSF1-203ENST00000527916 LECT2O14960 151 aa6.87□□□□□ -1.31
CPSF1-203ENST00000527916 P01737 135 aa6.87□□□□□ -1.31
CPSF1-203ENST00000527916 GZMBP10144 247 aa6.87□□□□□ -1.31
CPSF1-203ENST00000527916 SSTP61278 116 aa6.87□□□□□ -1.31
CPSF1-203ENST00000527916 RPL37AP61513 92 aaKnown RBP6.87□□□□□ -1.31
CPSF1-203ENST00000527916 ENHOQ6UWT2 76 aa6.87□□□□□ -1.31
CPSF1-203ENST00000527916 C9orf62Q8N4C0 152 aa6.87□□□□□ -1.31
CPSF1-203ENST00000527916 TRGC1P0CF51 173 aa6.86□□□□□ -1.31
CPSF1-203ENST00000527916 IQCJQ1A5X6 159 aa6.86□□□□□ -1.31
CPSF1-203ENST00000527916 LINC01620Q4KN68 170 aa6.86□□□□□ -1.31
CPSF1-203ENST00000527916 MPV17L2Q567V2 206 aa6.86□□□□□ -1.31
CPSF1-203ENST00000527916 NUDT10Q8NFP7 164 aa6.86□□□□□ -1.31
CPSF1-203ENST00000527916 NUDT11Q96G61 164 aa6.86□□□□□ -1.31
CPSF1-203ENST00000527916 CHCHD5Q9BSY4 110 aa6.86□□□□□ -1.31
CPSF1-203ENST00000527916 CNFNQ9BYD5 112 aa6.86□□□□□ -1.31
CPSF1-203ENST00000527916 PRR34Q9NV39 138 aa6.86□□□□□ -1.31
CPSF1-203ENST00000527916 TRBV25-1A0A075B6N4 114 aa6.85□□□□□ -1.31
CPSF1-203ENST00000527916 ANGP03950 147 aaKnown RBP6.85□□□□□ -1.31
CPSF1-203ENST00000527916 NTF3P20783 257 aa6.85□□□□□ -1.31
CPSF1-203ENST00000527916 MIAQ16674 131 aa6.85□□□□□ -1.31
CPSF1-203ENST00000527916 C14orf177Q52M58 125 aa6.85□□□□□ -1.31
CPSF1-203ENST00000527916 LYZL1Q6UWQ5 148 aa6.85□□□□□ -1.31
CPSF1-203ENST00000527916 C15orf54Q8N8G6 183 aa6.85□□□□□ -1.31
CPSF1-203ENST00000527916 TPPP3Q9BW30 176 aa6.85□□□□□ -1.31
CPSF1-203ENST00000527916 C1orf43Q9BWL3 253 aa6.85□□□□□ -1.31
CPSF1-203ENST00000527916 TNXBP22105 4242 aa6.84□□□□□ -1.31
CPSF1-203ENST00000527916 IGHV1-24A0A0C4DH33 117 aa6.84□□□□□ -1.31
CPSF1-203ENST00000527916 CRPP02741 224 aa6.84□□□□□ -1.31
CPSF1-203ENST00000527916 CTRLP40313 264 aa6.84□□□□□ -1.31
CPSF1-203ENST00000527916 BLOC1S1P78537 153 aa6.84□□□□□ -1.31
CPSF1-203ENST00000527916 SUMO4Q6EEV6 95 aa6.84□□□□□ -1.31
CPSF1-203ENST00000527916 RASL11AQ6T310 242 aa6.84□□□□□ -1.31
CPSF1-203ENST00000527916 AKAP14Q86UN6 197 aa6.84□□□□□ -1.31
CPSF1-203ENST00000527916 LYPD6BQ8NI32 183 aa6.84□□□□□ -1.31
CPSF1-203ENST00000527916 OCC1Q8TAD7 63 aa6.84□□□□□ -1.31
CPSF1-203ENST00000527916 DPH3P1Q9H4G8 78 aa6.84□□□□□ -1.31
CPSF1-203ENST00000527916 NIT2Q9NQR4 276 aa6.84□□□□□ -1.31
CPSF1-203ENST00000527916 A0A1B0GUV1 79 aa6.83□□□□□ -1.32
CPSF1-203ENST00000527916 TMEM250H0YL14 139 aa6.83□□□□□ -1.32
CPSF1-203ENST00000527916 NDUFS6O75380 124 aaKnown RBP6.83□□□□□ -1.32
CPSF1-203ENST00000527916 MGPP08493 103 aa6.83□□□□□ -1.32
CPSF1-203ENST00000527916 RBX1P62877 108 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 122.7 ms