RNA–Protein interactions for RNA: ENST00000527739.5

CAPN1-211, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-211ENST00000527739 OR10G8Q8NGN5 311 aa12.8□□□□□ -0.36
CAPN1-211ENST00000527739 BAALCQ8WXS3 180 aa12.8□□□□□ -0.36
CAPN1-211ENST00000527739 AP1S3Q96PC3 154 aa12.8□□□□□ -0.36
CAPN1-211ENST00000527739 COX11Q9Y6N1 276 aa12.8□□□□□ -0.36
CAPN1-211ENST00000527739 SMR3BP02814 79 aaPredicted RBP12.79□□□□□ -0.36
CAPN1-211ENST00000527739 MGPP08493 103 aa12.79□□□□□ -0.36
CAPN1-211ENST00000527739 BCL2P10415 239 aa12.79□□□□□ -0.36
CAPN1-211ENST00000527739 Q6ZNX1 250 aa12.79□□□□□ -0.36
CAPN1-211ENST00000527739 DNAJC30Q96LL9 226 aa12.79□□□□□ -0.36
CAPN1-211ENST00000527739 VAX2Q9UIW0 290 aa12.79□□□□□ -0.36
CAPN1-211ENST00000527739 TRBV6-8A0A0A6YYG3 113 aa12.78□□□□□ -0.36
CAPN1-211ENST00000527739 P01737 135 aa12.78□□□□□ -0.36
CAPN1-211ENST00000527739 AKAP14Q86UN6 197 aa12.78□□□□□ -0.36
CAPN1-211ENST00000527739 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.77□□□□□ -0.37
CAPN1-211ENST00000527739 XKRY2A2RUG3 117 aa12.77□□□□□ -0.37
CAPN1-211ENST00000527739 FRZBQ92765 325 aa12.77□□□□□ -0.37
CAPN1-211ENST00000527739 CHCHD5Q9BSY4 110 aa12.77□□□□□ -0.37
CAPN1-211ENST00000527739 CHCHD7Q9BUK0 85 aa12.77□□□□□ -0.37
CAPN1-211ENST00000527739 BIN3Q9NQY0 253 aa12.77□□□□□ -0.37
CAPN1-211ENST00000527739 C19orf71A6NCJ1 209 aa12.76□□□□□ -0.37
CAPN1-211ENST00000527739 SMIM12Q96EX1 92 aa12.76□□□□□ -0.37
CAPN1-211ENST00000527739 KIF25-AS1Q9Y6Z4 181 aa12.76□□□□□ -0.37
CAPN1-211ENST00000527739 VPS13BQ7Z7G8 4022 aa12.75□□□□□ -0.37
CAPN1-211ENST00000527739 IGLC6P0CF74 106 aa12.75□□□□□ -0.37
CAPN1-211ENST00000527739 INAFM2P0DMQ5 153 aa12.75□□□□□ -0.37
CAPN1-211ENST00000527739 CACNG7P62955 275 aa12.75□□□□□ -0.37
CAPN1-211ENST00000527739 C15orf54Q8N8G6 183 aa12.75□□□□□ -0.37
CAPN1-211ENST00000527739 TRBV20OR9-2A0A075B6H5 130 aa12.74□□□□□ -0.37
CAPN1-211ENST00000527739 Q5VSD8 79 aa12.74□□□□□ -0.37
CAPN1-211ENST00000527739 LYZL1Q6UWQ5 148 aa12.74□□□□□ -0.37
CAPN1-211ENST00000527739 C9orf62Q8N4C0 152 aa12.74□□□□□ -0.37
CAPN1-211ENST00000527739 MYCBP2O75592 4640 aa12.74□□□□□ -0.37
CAPN1-211ENST00000527739 CRPP02741 224 aa12.73□□□□□ -0.37
CAPN1-211ENST00000527739 ANGP03950 147 aaKnown RBP12.73□□□□□ -0.37
CAPN1-211ENST00000527739 TAGLN2P37802 199 aaKnown RBP12.73□□□□□ -0.37
CAPN1-211ENST00000527739 Q0VG73 95 aa12.73□□□□□ -0.37
CAPN1-211ENST00000527739 TMEM70Q9BUB7 260 aa12.73□□□□□ -0.37
CAPN1-211ENST00000527739 F2Z2F3 143 aa12.72□□□□□ -0.37
CAPN1-211ENST00000527739 H7C1H1 209 aa12.72□□□□□ -0.37
CAPN1-211ENST00000527739 MPV17L2Q567V2 206 aa12.72□□□□□ -0.37
CAPN1-211ENST00000527739 TMEM97Q5BJF2 176 aa12.72□□□□□ -0.37
CAPN1-211ENST00000527739 ALKAL2Q6UX46 152 aa12.72□□□□□ -0.37
CAPN1-211ENST00000527739 Q8N976 141 aa12.72□□□□□ -0.37
CAPN1-211ENST00000527739 NUDT10Q8NFP7 164 aa12.72□□□□□ -0.37
CAPN1-211ENST00000527739 NUDT11Q96G61 164 aa12.72□□□□□ -0.37
CAPN1-211ENST00000527739 DMBT1Q9UGM3 2413 aaPredicted RBP12.71□□□□□ -0.37
CAPN1-211ENST00000527739 PKIAP61925 76 aa12.71□□□□□ -0.37
CAPN1-211ENST00000527739 GAGE6Q13070 117 aa12.71□□□□□ -0.37
CAPN1-211ENST00000527739 SUMO4Q6EEV6 95 aa12.71□□□□□ -0.37
CAPN1-211ENST00000527739 C1orf43Q9BWL3 253 aa12.71□□□□□ -0.37
CAPN1-211ENST00000527739 FAM30AQ9NZY2 134 aa12.71□□□□□ -0.37
CAPN1-211ENST00000527739 FAM229AH3BQW9 127 aa12.7□□□□□ -0.38
CAPN1-211ENST00000527739 M0QY20 66 aa12.7□□□□□ -0.38
CAPN1-211ENST00000527739 TRGC1P0CF51 173 aa12.7□□□□□ -0.38
CAPN1-211ENST00000527739 NTF3P20783 257 aa12.7□□□□□ -0.38
CAPN1-211ENST00000527739 BLOC1S1P78537 153 aa12.7□□□□□ -0.38
CAPN1-211ENST00000527739 ATRAIDQ6UW56 229 aa12.7□□□□□ -0.38
CAPN1-211ENST00000527739 ENHOQ6UWT2 76 aa12.7□□□□□ -0.38
CAPN1-211ENST00000527739 NTM-AS1Q6ZSK4 140 aa12.7□□□□□ -0.38
CAPN1-211ENST00000527739 TRBV25-1A0A075B6N4 114 aa12.69□□□□□ -0.38
CAPN1-211ENST00000527739 NKX2-5P52952 324 aaPredicted RBP12.69□□□□□ -0.38
CAPN1-211ENST00000527739 CEBPGP53567 150 aa12.69□□□□□ -0.38
CAPN1-211ENST00000527739 LINC01620Q4KN68 170 aa12.69□□□□□ -0.38
CAPN1-211ENST00000527739 OCC1Q8TAD7 63 aa12.69□□□□□ -0.38
CAPN1-211ENST00000527739 RNASE7Q9H1E1 156 aaKnown RBP12.69□□□□□ -0.38
CAPN1-211ENST00000527739 TWIST1Q15672 202 aa12.68□□□□□ -0.38
CAPN1-211ENST00000527739 DPH3P1Q9H4G8 78 aa12.68□□□□□ -0.38
CAPN1-211ENST00000527739 RPP21Q9H633 154 aaKnown RBP12.68□□□□□ -0.38
CAPN1-211ENST00000527739 IGHV1-24A0A0C4DH33 117 aa12.67□□□□□ -0.38
CAPN1-211ENST00000527739 RASL11AQ6T310 242 aa12.67□□□□□ -0.38
CAPN1-211ENST00000527739 CLPSL2Q6UWE3 100 aa12.67□□□□□ -0.38
CAPN1-211ENST00000527739 K7EN84 100 aa12.66□□□□□ -0.38
CAPN1-211ENST00000527739 RBX1P62877 108 aa12.66□□□□□ -0.38
CAPN1-211ENST00000527739 DEFB104AQ8WTQ1 72 aa12.66□□□□□ -0.38
CAPN1-211ENST00000527739 HLA-DQA1P01909 254 aa12.65□□□□□ -0.38
CAPN1-211ENST00000527739 DNAH8Q96JB1 4490 aa12.64□□□□□ -0.39
CAPN1-211ENST00000527739 IQCJQ1A5X6 159 aa12.64□□□□□ -0.39
CAPN1-211ENST00000527739 WDR73Q6P4I2 378 aa12.64□□□□□ -0.39
CAPN1-211ENST00000527739 LINC00269Q8N2A0 174 aa12.64□□□□□ -0.39
CAPN1-211ENST00000527739 NIT2Q9NQR4 276 aa12.64□□□□□ -0.39
CAPN1-211ENST00000527739 TMEM250H0YL14 139 aa12.63□□□□□ -0.39
CAPN1-211ENST00000527739 GATCO43716 136 aaKnown RBP12.63□□□□□ -0.39
CAPN1-211ENST00000527739 CTRLP40313 264 aa12.63□□□□□ -0.39
CAPN1-211ENST00000527739 MIAQ16674 131 aa12.63□□□□□ -0.39
CAPN1-211ENST00000527739 C14orf177Q52M58 125 aa12.63□□□□□ -0.39
CAPN1-211ENST00000527739 EIF5A2Q9GZV4 153 aaKnown RBP12.63□□□□□ -0.39
CAPN1-211ENST00000527739 SMIM15Q7Z3B0 74 aa12.62□□□□□ -0.39
CAPN1-211ENST00000527739 TMEM243Q9BU79 118 aa12.62□□□□□ -0.39
CAPN1-211ENST00000527739 FLG2Q5D862 2391 aaPredicted RBP12.62□□□□□ -0.39
CAPN1-211ENST00000527739 SRRM2Q9UQ35 2752 aaKnown RBP12.61□□□□□ -0.39
CAPN1-211ENST00000527739 TRAV26-2A0A0B4J265 109 aa12.6□□□□□ -0.39
CAPN1-211ENST00000527739 USP17L23D6RBM5 183 aa12.6□□□□□ -0.39
CAPN1-211ENST00000527739 UBE2L6O14933 153 aa12.6□□□□□ -0.39
CAPN1-211ENST00000527739 COTL1Q14019 142 aa12.6□□□□□ -0.39
CAPN1-211ENST00000527739 PGLYRP4Q96LB8 373 aa12.6□□□□□ -0.39
CAPN1-211ENST00000527739 AMTP48728 403 aa12.59□□□□□ -0.39
CAPN1-211ENST00000527739 REG3AQ06141 175 aa12.59□□□□□ -0.39
CAPN1-211ENST00000527739 Q6ZSA8 131 aa12.59□□□□□ -0.39
CAPN1-211ENST00000527739 GATD1Q8NB37 220 aa12.59□□□□□ -0.39
CAPN1-211ENST00000527739 LYPD6BQ8NI32 183 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms