RNA–Protein interactions for RNA: ENST00000525441.5

NR1H3-228, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-228ENST00000525441 A0A087WTM6 91 aa11.78□□□□□ -0.52
NR1H3-228ENST00000525441 TMEM241Q24JQ0 296 aa11.78□□□□□ -0.52
NR1H3-228ENST00000525441 OCC1Q8TAD7 63 aa11.78□□□□□ -0.52
NR1H3-228ENST00000525441 Q9HAA7 133 aa11.78□□□□□ -0.52
NR1H3-228ENST00000525441 NAT8Q9UHE5 227 aa11.78□□□□□ -0.52
NR1H3-228ENST00000525441 CDPF1Q6NVV7 123 aa11.77□□□□□ -0.53
NR1H3-228ENST00000525441 SLC7A5P1Q8MH63 180 aa11.77□□□□□ -0.53
NR1H3-228ENST00000525441 NEXN-AS1Q8NBZ9 246 aa11.77□□□□□ -0.53
NR1H3-228ENST00000525441 NUDT10Q8NFP7 164 aa11.77□□□□□ -0.53
NR1H3-228ENST00000525441 NUDT11Q96G61 164 aa11.77□□□□□ -0.53
NR1H3-228ENST00000525441 SEC11CQ9BY50 192 aa11.77□□□□□ -0.53
NR1H3-228ENST00000525441 K7EN84 100 aa11.76□□□□□ -0.53
NR1H3-228ENST00000525441 CDK2AP2O75956 126 aa11.76□□□□□ -0.53
NR1H3-228ENST00000525441 ADCYAP1P18509 176 aa11.76□□□□□ -0.53
NR1H3-228ENST00000525441 KCNIP4Q6PIL6 250 aa11.76□□□□□ -0.53
NR1H3-228ENST00000525441 LINC01551Q86U37 167 aa11.76□□□□□ -0.53
NR1H3-228ENST00000525441 TM2D2Q9BX73 214 aa11.76□□□□□ -0.53
NR1H3-228ENST00000525441 RPP21Q9H633 154 aaKnown RBP11.76□□□□□ -0.53
NR1H3-228ENST00000525441 KIF25-AS1Q9Y6Z4 181 aa11.76□□□□□ -0.53
NR1H3-228ENST00000525441 TRAV8-3A0A0A6YYJ7 113 aa11.75□□□□□ -0.53
NR1H3-228ENST00000525441 TRGC1P0CF51 173 aa11.75□□□□□ -0.53
NR1H3-228ENST00000525441 C10orf91Q5T1B1 145 aa11.75□□□□□ -0.53
NR1H3-228ENST00000525441 LYZL1Q6UWQ5 148 aa11.75□□□□□ -0.53
NR1H3-228ENST00000525441 CHCHD7Q9BUK0 85 aa11.75□□□□□ -0.53
NR1H3-228ENST00000525441 A0A087WX48 190 aa11.74□□□□□ -0.53
NR1H3-228ENST00000525441 F8W036 122 aa11.74□□□□□ -0.53
NR1H3-228ENST00000525441 H7C1H1 209 aa11.74□□□□□ -0.53
NR1H3-228ENST00000525441 MGPP08493 103 aa11.74□□□□□ -0.53
NR1H3-228ENST00000525441 RPL23P62829 140 aaKnown RBP11.74□□□□□ -0.53
NR1H3-228ENST00000525441 WDR73Q6P4I2 378 aa11.74□□□□□ -0.53
NR1H3-228ENST00000525441 DAZ4Q86SG3 579 aaKnown RBP11.74□□□□□ -0.53
NR1H3-228ENST00000525441 NIT1Q86X76 327 aa11.74□□□□□ -0.53
NR1H3-228ENST00000525441 Q8N3U1 123 aa11.74□□□□□ -0.53
NR1H3-228ENST00000525441 RNASE7Q9H1E1 156 aaKnown RBP11.74□□□□□ -0.53
NR1H3-228ENST00000525441 DAZ3Q9NR90 486 aaKnown RBP11.74□□□□□ -0.53
NR1H3-228ENST00000525441 CTRLP40313 264 aa11.73□□□□□ -0.53
NR1H3-228ENST00000525441 PNRC1Q12796 327 aaPredicted RBP11.73□□□□□ -0.53
NR1H3-228ENST00000525441 ELOBQ15370 118 aa11.73□□□□□ -0.53
NR1H3-228ENST00000525441 TMEM97Q5BJF2 176 aa11.73□□□□□ -0.53
NR1H3-228ENST00000525441 CARHSP1Q9Y2V2 147 aaKnown RBP11.73□□□□□ -0.53
NR1H3-228ENST00000525441 TRBV6-8A0A0A6YYG3 113 aa11.72□□□□□ -0.53
NR1H3-228ENST00000525441 NTF3P20783 257 aa11.72□□□□□ -0.53
NR1H3-228ENST00000525441 ISOC2Q96AB3 205 aa11.72□□□□□ -0.53
NR1H3-228ENST00000525441 RMI2Q96E14 147 aa11.72□□□□□ -0.53
NR1H3-228ENST00000525441 LRP1BQ9NZR2 4599 aa11.71□□□□□ -0.53
NR1H3-228ENST00000525441 GATCO43716 136 aaKnown RBP11.71□□□□□ -0.53
NR1H3-228ENST00000525441 PKIAP61925 76 aa11.71□□□□□ -0.53
NR1H3-228ENST00000525441 ADIRFQ15847 76 aa11.71□□□□□ -0.53
NR1H3-228ENST00000525441 FAM231DQ6ZW35 169 aa11.71□□□□□ -0.53
NR1H3-228ENST00000525441 DNAJC30Q96LL9 226 aa11.71□□□□□ -0.53
NR1H3-228ENST00000525441 DPH3P1Q9H4G8 78 aa11.71□□□□□ -0.53
NR1H3-228ENST00000525441 COX11Q9Y6N1 276 aa11.71□□□□□ -0.53
NR1H3-228ENST00000525441 TMEM262E9PQX1 116 aa11.7□□□□□ -0.54
NR1H3-228ENST00000525441 M0QY20 66 aa11.7□□□□□ -0.54
NR1H3-228ENST00000525441 TWIST1Q15672 202 aa11.7□□□□□ -0.54
NR1H3-228ENST00000525441 SUMO4Q6EEV6 95 aa11.7□□□□□ -0.54
NR1H3-228ENST00000525441 CNFNQ9BYD5 112 aa11.7□□□□□ -0.54
NR1H3-228ENST00000525441 RYR1P21817 5038 aa11.7□□□□□ -0.54
NR1H3-228ENST00000525441 LRCOL1A6NCL2 159 aa11.69□□□□□ -0.54
NR1H3-228ENST00000525441 A8MWL6 223 aa11.69□□□□□ -0.54
NR1H3-228ENST00000525441 OSTCQ9NRP0 149 aa11.69□□□□□ -0.54
NR1H3-228ENST00000525441 KLK12Q9UKR0 248 aa11.69□□□□□ -0.54
NR1H3-228ENST00000525441 FUSP35637 526 aaKnown RBP eCLIP11.68□□□□□ -0.54
NR1H3-228ENST00000525441 RASL11AQ6T310 242 aa11.68□□□□□ -0.54
NR1H3-228ENST00000525441 SMIM15Q7Z3B0 74 aa11.68□□□□□ -0.54
NR1H3-228ENST00000525441 NTN5Q8WTR8 489 aaPredicted RBP11.68□□□□□ -0.54
NR1H3-228ENST00000525441 CHCHD5Q9BSY4 110 aa11.68□□□□□ -0.54
NR1H3-228ENST00000525441 CT83Q5H943 113 aa11.67□□□□□ -0.54
NR1H3-228ENST00000525441 TRBV25-1A0A075B6N4 114 aa11.66□□□□□ -0.54
NR1H3-228ENST00000525441 Q0VG73 95 aa11.66□□□□□ -0.54
NR1H3-228ENST00000525441 Q8N814 137 aa11.66□□□□□ -0.54
NR1H3-228ENST00000525441 C15orf54Q8N8G6 183 aa11.66□□□□□ -0.54
NR1H3-228ENST00000525441 GTSF1Q8WW33 167 aa11.66□□□□□ -0.54
NR1H3-228ENST00000525441 UBE2WQ96B02 151 aa11.66□□□□□ -0.54
NR1H3-228ENST00000525441 IGLV5-52A0A0A0MRZ9 124 aa11.65□□□□□ -0.54
NR1H3-228ENST00000525441 GCSHP23434 173 aa11.65□□□□□ -0.54
NR1H3-228ENST00000525441 NTM-AS1Q6ZSK4 140 aa11.65□□□□□ -0.54
NR1H3-228ENST00000525441 MAPKAPK5-AS1Q8N8E1 139 aa11.65□□□□□ -0.54
NR1H3-228ENST00000525441 BORCS7Q96B45 105 aa11.65□□□□□ -0.54
NR1H3-228ENST00000525441 NIT2Q9NQR4 276 aa11.65□□□□□ -0.54
NR1H3-228ENST00000525441 IGKV2D-24A0A075B6R9 120 aa11.64□□□□□ -0.55
NR1H3-228ENST00000525441 IGHV1-24A0A0C4DH33 117 aa11.64□□□□□ -0.55
NR1H3-228ENST00000525441 CRPP02741 224 aa11.64□□□□□ -0.55
NR1H3-228ENST00000525441 FRZBQ92765 325 aa11.64□□□□□ -0.55
NR1H3-228ENST00000525441 PGLYRP4Q96LB8 373 aa11.64□□□□□ -0.55
NR1H3-228ENST00000525441 V9GYV3 84 aa11.64□□□□□ -0.55
NR1H3-228ENST00000525441 DNAH5Q8TE73 4624 aa11.64□□□□□ -0.55
NR1H3-228ENST00000525441 PPP1R2P9O14990 202 aa11.63□□□□□ -0.55
NR1H3-228ENST00000525441 APOC3P02656 99 aa11.63□□□□□ -0.55
NR1H3-228ENST00000525441 MT-ND4LP03901 98 aa11.63□□□□□ -0.55
NR1H3-228ENST00000525441 ANGP03950 147 aaKnown RBP11.63□□□□□ -0.55
NR1H3-228ENST00000525441 IQCJQ1A5X6 159 aa11.63□□□□□ -0.55
NR1H3-228ENST00000525441 MPV17L2Q567V2 206 aa11.63□□□□□ -0.55
NR1H3-228ENST00000525441 SVBPQ8N300 66 aa11.63□□□□□ -0.55
NR1H3-228ENST00000525441 CLRN3Q8NCR9 226 aa11.63□□□□□ -0.55
NR1H3-228ENST00000525441 ANAPC16Q96DE5 110 aa11.63□□□□□ -0.55
NR1H3-228ENST00000525441 HSPG2P98160 4391 aa11.63□□□□□ -0.55
NR1H3-228ENST00000525441 FOXA3P55318 350 aaPredicted RBP11.62□□□□□ -0.55
NR1H3-228ENST00000525441 ATRAIDQ6UW56 229 aa11.62□□□□□ -0.55
NR1H3-228ENST00000525441 TSKUQ8WUA8 353 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms