RNA–Protein interactions for RNA: ENST00000525334.5

TSPAN4-215, Transcript of tetraspanin 4, humanhuman

TSL 3

Gene TSPAN4, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-215ENST00000525334 NIT1Q86X76 327 aa12.39□□□□□ -0.43
TSPAN4-215ENST00000525334 FAM210AQ96ND0 272 aa12.39□□□□□ -0.43
TSPAN4-215ENST00000525334 DAZ3Q9NR90 486 aaKnown RBP12.39□□□□□ -0.43
TSPAN4-215ENST00000525334 CDK2AP2O75956 126 aa12.38□□□□□ -0.43
TSPAN4-215ENST00000525334 CTRLP40313 264 aa12.38□□□□□ -0.43
TSPAN4-215ENST00000525334 NTF3P20783 257 aa12.37□□□□□ -0.43
TSPAN4-215ENST00000525334 PGPEP1Q9NXJ5 209 aa12.37□□□□□ -0.43
TSPAN4-215ENST00000525334 URGCP-MRPS24S4R325 110 aa12.37□□□□□ -0.43
TSPAN4-215ENST00000525334 TRBV6-8A0A0A6YYG3 113 aa12.36□□□□□ -0.43
TSPAN4-215ENST00000525334 NDUFS6O75380 124 aaKnown RBP12.36□□□□□ -0.43
TSPAN4-215ENST00000525334 TRGC1P0CF51 173 aa12.36□□□□□ -0.43
TSPAN4-215ENST00000525334 SUMO4Q6EEV6 95 aa12.36□□□□□ -0.43
TSPAN4-215ENST00000525334 LRCOL1A6NCL2 159 aa12.35□□□□□ -0.43
TSPAN4-215ENST00000525334 M0QY20 66 aa12.35□□□□□ -0.43
TSPAN4-215ENST00000525334 CDPF1Q6NVV7 123 aa12.35□□□□□ -0.43
TSPAN4-215ENST00000525334 WDR73Q6P4I2 378 aa12.35□□□□□ -0.43
TSPAN4-215ENST00000525334 FAM231DQ6ZW35 169 aa12.35□□□□□ -0.43
TSPAN4-215ENST00000525334 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.35□□□□□ -0.43
TSPAN4-215ENST00000525334 GTSF1Q8WW33 167 aa12.35□□□□□ -0.43
TSPAN4-215ENST00000525334 SMIM7Q9BQ49 75 aa12.35□□□□□ -0.43
TSPAN4-215ENST00000525334 CNFNQ9BYD5 112 aa12.35□□□□□ -0.43
TSPAN4-215ENST00000525334 TRAV8-3A0A0A6YYJ7 113 aa12.34□□□□□ -0.43
TSPAN4-215ENST00000525334 GATCO43716 136 aaKnown RBP12.34□□□□□ -0.43
TSPAN4-215ENST00000525334 SRP19P09132 144 aaKnown RBP12.34□□□□□ -0.43
TSPAN4-215ENST00000525334 DPH3P1Q9H4G8 78 aa12.34□□□□□ -0.43
TSPAN4-215ENST00000525334 A0A087WX48 190 aa12.33□□□□□ -0.44
TSPAN4-215ENST00000525334 H7C1H1 209 aa12.33□□□□□ -0.44
TSPAN4-215ENST00000525334 TWIST1Q15672 202 aa12.33□□□□□ -0.44
TSPAN4-215ENST00000525334 TEX261Q6UWH6 196 aa12.33□□□□□ -0.44
TSPAN4-215ENST00000525334 CHCHD7Q9BUK0 85 aa12.33□□□□□ -0.44
TSPAN4-215ENST00000525334 TM2D2Q9BX73 214 aa12.33□□□□□ -0.44
TSPAN4-215ENST00000525334 ZNF727A8MUV8 499 aa12.32□□□□□ -0.44
TSPAN4-215ENST00000525334 KCNIP4Q6PIL6 250 aa12.32□□□□□ -0.44
TSPAN4-215ENST00000525334 NTM-AS1Q6ZSK4 140 aa12.32□□□□□ -0.44
TSPAN4-215ENST00000525334 LINC01551Q86U37 167 aa12.32□□□□□ -0.44
TSPAN4-215ENST00000525334 DNAJC30Q96LL9 226 aa12.32□□□□□ -0.44
TSPAN4-215ENST00000525334 KLK12Q9UKR0 248 aa12.32□□□□□ -0.44
TSPAN4-215ENST00000525334 TMEM97Q5BJF2 176 aa12.31□□□□□ -0.44
TSPAN4-215ENST00000525334 RASL11AQ6T310 242 aa12.31□□□□□ -0.44
TSPAN4-215ENST00000525334 KRTAP4-5Q9BYR2 181 aa12.31□□□□□ -0.44
TSPAN4-215ENST00000525334 A8MWL6 223 aa12.3□□□□□ -0.44
TSPAN4-215ENST00000525334 TMEM262E9PQX1 116 aa12.3□□□□□ -0.44
TSPAN4-215ENST00000525334 ELOBQ15370 118 aa12.3□□□□□ -0.44
TSPAN4-215ENST00000525334 CT83Q5H943 113 aa12.3□□□□□ -0.44
TSPAN4-215ENST00000525334 CHCHD5Q9BSY4 110 aa12.3□□□□□ -0.44
TSPAN4-215ENST00000525334 MPV17L2Q567V2 206 aa12.29□□□□□ -0.44
TSPAN4-215ENST00000525334 Q8N814 137 aa12.29□□□□□ -0.44
TSPAN4-215ENST00000525334 UBE2WQ96B02 151 aa12.29□□□□□ -0.44
TSPAN4-215ENST00000525334 PGLYRP4Q96LB8 373 aa12.29□□□□□ -0.44
TSPAN4-215ENST00000525334 WFDC2Q14508 124 aa12.28□□□□□ -0.44
TSPAN4-215ENST00000525334 RMI2Q96E14 147 aa12.28□□□□□ -0.44
TSPAN4-215ENST00000525334 NIT2Q9NQR4 276 aa12.28□□□□□ -0.44
TSPAN4-215ENST00000525334 ABCA13Q86UQ4 5058 aa12.28□□□□□ -0.44
TSPAN4-215ENST00000525334 TRBV25-1A0A075B6N4 114 aa12.27□□□□□ -0.45
TSPAN4-215ENST00000525334 C9JQL5 133 aa12.27□□□□□ -0.45
TSPAN4-215ENST00000525334 FOXA3P55318 350 aaPredicted RBP12.27□□□□□ -0.45
TSPAN4-215ENST00000525334 KRTAP10-1P60331 282 aa12.27□□□□□ -0.45
TSPAN4-215ENST00000525334 PKIAP61925 76 aa12.27□□□□□ -0.45
TSPAN4-215ENST00000525334 MAPKAPK5-AS1Q8N8E1 139 aa12.27□□□□□ -0.45
TSPAN4-215ENST00000525334 COX11Q9Y6N1 276 aa12.27□□□□□ -0.45
TSPAN4-215ENST00000525334 IGKV2D-24A0A075B6R9 120 aa12.26□□□□□ -0.45
TSPAN4-215ENST00000525334 IGLV5-52A0A0A0MRZ9 124 aa12.26□□□□□ -0.45
TSPAN4-215ENST00000525334 TRAV26-2A0A0B4J265 109 aa12.26□□□□□ -0.45
TSPAN4-215ENST00000525334 SRSF3P84103 164 aaKnown RBP12.26□□□□□ -0.45
TSPAN4-215ENST00000525334 IQCJQ1A5X6 159 aa12.26□□□□□ -0.45
TSPAN4-215ENST00000525334 SMIM15Q7Z3B0 74 aa12.26□□□□□ -0.45
TSPAN4-215ENST00000525334 C15orf54Q8N8G6 183 aa12.26□□□□□ -0.45
TSPAN4-215ENST00000525334 Q8N976 141 aa12.26□□□□□ -0.45
TSPAN4-215ENST00000525334 GATD1Q8NB37 220 aa12.26□□□□□ -0.45
TSPAN4-215ENST00000525334 NTN5Q8WTR8 489 aaPredicted RBP12.26□□□□□ -0.45
TSPAN4-215ENST00000525334 TSKUQ8WUA8 353 aa12.26□□□□□ -0.45
TSPAN4-215ENST00000525334 OSTCQ9NRP0 149 aa12.26□□□□□ -0.45
TSPAN4-215ENST00000525334 IGHV1-24A0A0C4DH33 117 aa12.25□□□□□ -0.45
TSPAN4-215ENST00000525334 LECT2O14960 151 aa12.25□□□□□ -0.45
TSPAN4-215ENST00000525334 ANGP03950 147 aaKnown RBP12.25□□□□□ -0.45
TSPAN4-215ENST00000525334 GCSHP23434 173 aa12.25□□□□□ -0.45
TSPAN4-215ENST00000525334 GAGE6Q13070 117 aa12.25□□□□□ -0.45
TSPAN4-215ENST00000525334 FAM74A3Q4VXF1 159 aa12.25□□□□□ -0.45
TSPAN4-215ENST00000525334 ATRAIDQ6UW56 229 aa12.25□□□□□ -0.45
TSPAN4-215ENST00000525334 HIGD1CA8MV81 97 aa12.24□□□□□ -0.45
TSPAN4-215ENST00000525334 Q0VG73 95 aa12.24□□□□□ -0.45
TSPAN4-215ENST00000525334 PEA15Q15121 130 aa12.24□□□□□ -0.45
TSPAN4-215ENST00000525334 TMEM241Q24JQ0 296 aa12.24□□□□□ -0.45
TSPAN4-215ENST00000525334 ENHOQ6UWT2 76 aa12.24□□□□□ -0.45
TSPAN4-215ENST00000525334 BAALCQ8WXS3 180 aa12.24□□□□□ -0.45
TSPAN4-215ENST00000525334 ISOC2Q96AB3 205 aa12.24□□□□□ -0.45
TSPAN4-215ENST00000525334 GFRA4Q9GZZ7 299 aa12.24□□□□□ -0.45
TSPAN4-215ENST00000525334 CRPP02741 224 aa12.23□□□□□ -0.45
TSPAN4-215ENST00000525334 RPL23P62829 140 aaKnown RBP12.23□□□□□ -0.45
TSPAN4-215ENST00000525334 RBX1P62877 108 aa12.23□□□□□ -0.45
TSPAN4-215ENST00000525334 DEFB104AQ8WTQ1 72 aa12.23□□□□□ -0.45
TSPAN4-215ENST00000525334 FRZBQ92765 325 aa12.23□□□□□ -0.45
TSPAN4-215ENST00000525334 BORCS7Q96B45 105 aa12.23□□□□□ -0.45
TSPAN4-215ENST00000525334 V9GYV3 84 aa12.23□□□□□ -0.45
TSPAN4-215ENST00000525334 FAM231BA6NCW3 169 aa12.22□□□□□ -0.45
TSPAN4-215ENST00000525334 Q8N1X5 172 aa12.22□□□□□ -0.45
TSPAN4-215ENST00000525334 RPL39LQ96EH5 51 aaKnown RBP12.22□□□□□ -0.45
TSPAN4-215ENST00000525334 A0A1B0GUT8 65 aa12.21□□□□□ -0.45
TSPAN4-215ENST00000525334 ADIRFQ15847 76 aa12.21□□□□□ -0.45
TSPAN4-215ENST00000525334 TMEM243Q9BU79 118 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms