RNA–Protein interactions for RNA: ENST00000522959.5

ARFGAP1-216, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 2

Gene ARFGAP1, Length 556 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-216ENST00000522959 Q9HAA7 133 aa10.35□□□□□ -0.75
ARFGAP1-216ENST00000522959 TRAV8-6A0A0B4J262 113 aa10.34□□□□□ -0.75
ARFGAP1-216ENST00000522959 SNAI2O43623 268 aa10.34□□□□□ -0.75
ARFGAP1-216ENST00000522959 OR5AL1P0C617 328 aa10.34□□□□□ -0.75
ARFGAP1-216ENST00000522959 ADCYAP1P18509 176 aa10.34□□□□□ -0.75
ARFGAP1-216ENST00000522959 DAZ4Q86SG3 579 aaKnown RBP10.34□□□□□ -0.75
ARFGAP1-216ENST00000522959 C10orf126Q8N4M7 172 aa10.34□□□□□ -0.75
ARFGAP1-216ENST00000522959 SSBP4Q9BWG4 385 aaPredicted RBP10.34□□□□□ -0.75
ARFGAP1-216ENST00000522959 DAZ3Q9NR90 486 aaKnown RBP10.34□□□□□ -0.75
ARFGAP1-216ENST00000522959 F8W036 122 aa10.33□□□□□ -0.76
ARFGAP1-216ENST00000522959 M0R381 172 aa10.33□□□□□ -0.76
ARFGAP1-216ENST00000522959 IGLC6P0CF74 106 aa10.33□□□□□ -0.76
ARFGAP1-216ENST00000522959 NDUFA5Q16718 116 aa10.33□□□□□ -0.76
ARFGAP1-216ENST00000522959 C10orf91Q5T1B1 145 aa10.33□□□□□ -0.76
ARFGAP1-216ENST00000522959 FAM74A4Q5TZK3 123 aa10.33□□□□□ -0.76
ARFGAP1-216ENST00000522959 FAM231BA6NCW3 169 aa10.32□□□□□ -0.76
ARFGAP1-216ENST00000522959 GATCO43716 136 aaKnown RBP10.32□□□□□ -0.76
ARFGAP1-216ENST00000522959 HAMPP81172 84 aa10.32□□□□□ -0.76
ARFGAP1-216ENST00000522959 CARHSP1Q9Y2V2 147 aaKnown RBP10.32□□□□□ -0.76
ARFGAP1-216ENST00000522959 SRRM2Q9UQ35 2752 aaKnown RBP10.31□□□□□ -0.76
ARFGAP1-216ENST00000522959 MUC21A0A0G2JKD1 596 aa10.31□□□□□ -0.76
ARFGAP1-216ENST00000522959 MUC21A0A140T8X8 626 aa10.31□□□□□ -0.76
ARFGAP1-216ENST00000522959 A8MWL6 223 aa10.31□□□□□ -0.76
ARFGAP1-216ENST00000522959 EREGO14944 169 aa10.31□□□□□ -0.76
ARFGAP1-216ENST00000522959 CTRLP40313 264 aa10.31□□□□□ -0.76
ARFGAP1-216ENST00000522959 CDPF1Q6NVV7 123 aa10.31□□□□□ -0.76
ARFGAP1-216ENST00000522959 OR10AG1Q8NH19 301 aa10.31□□□□□ -0.76
ARFGAP1-216ENST00000522959 GFRA4Q9GZZ7 299 aa10.31□□□□□ -0.76
ARFGAP1-216ENST00000522959 PHLDA3Q9Y5J5 127 aa10.31□□□□□ -0.76
ARFGAP1-216ENST00000522959 F2Z2F3 143 aa10.3□□□□□ -0.76
ARFGAP1-216ENST00000522959 FER1L6-AS1Q8NA97 138 aa10.3□□□□□ -0.76
ARFGAP1-216ENST00000522959 SYT8Q8NBV8 401 aa10.3□□□□□ -0.76
ARFGAP1-216ENST00000522959 OR10G8Q8NGN5 311 aa10.3□□□□□ -0.76
ARFGAP1-216ENST00000522959 CNFNQ9BYD5 112 aa10.3□□□□□ -0.76
ARFGAP1-216ENST00000522959 V9GYV3 84 aa10.3□□□□□ -0.76
ARFGAP1-216ENST00000522959 MYCBP2O75592 4640 aa10.3□□□□□ -0.76
ARFGAP1-216ENST00000522959 HERC1Q15751 4861 aa10.29□□□□□ -0.76
ARFGAP1-216ENST00000522959 PPP1R2P9O14990 202 aa10.29□□□□□ -0.76
ARFGAP1-216ENST00000522959 ZFP82Q8N141 532 aa10.29□□□□□ -0.76
ARFGAP1-216ENST00000522959 TSKUQ8WUA8 353 aa10.29□□□□□ -0.76
ARFGAP1-216ENST00000522959 FAM30AQ9NZY2 134 aa10.29□□□□□ -0.76
ARFGAP1-216ENST00000522959 GZMBP10144 247 aa10.28□□□□□ -0.76
ARFGAP1-216ENST00000522959 GCSHP23434 173 aa10.28□□□□□ -0.76
ARFGAP1-216ENST00000522959 FOXA3P55318 350 aaPredicted RBP10.28□□□□□ -0.76
ARFGAP1-216ENST00000522959 WDR73Q6P4I2 378 aa10.28□□□□□ -0.76
ARFGAP1-216ENST00000522959 Q8N814 137 aa10.28□□□□□ -0.76
ARFGAP1-216ENST00000522959 ANAPC16Q96DE5 110 aa10.28□□□□□ -0.76
ARFGAP1-216ENST00000522959 RHODO00212 210 aa10.27□□□□□ -0.77
ARFGAP1-216ENST00000522959 PSCAO43653 123 aa10.27□□□□□ -0.77
ARFGAP1-216ENST00000522959 SMR3BP02814 79 aaPredicted RBP10.27□□□□□ -0.77
ARFGAP1-216ENST00000522959 MT-ND4LP03901 98 aa10.27□□□□□ -0.77
ARFGAP1-216ENST00000522959 UBE2D3P61077 147 aa10.27□□□□□ -0.77
ARFGAP1-216ENST00000522959 UBE2D2P62837 147 aa10.27□□□□□ -0.77
ARFGAP1-216ENST00000522959 CACNG7P62955 275 aa10.27□□□□□ -0.77
ARFGAP1-216ENST00000522959 NIT1Q86X76 327 aa10.27□□□□□ -0.77
ARFGAP1-216ENST00000522959 GTSF1Q8WW33 167 aa10.27□□□□□ -0.77
ARFGAP1-216ENST00000522959 KIF25-AS1Q9Y6Z4 181 aa10.27□□□□□ -0.77
ARFGAP1-216ENST00000522959 LECT2O14960 151 aa10.26□□□□□ -0.77
ARFGAP1-216ENST00000522959 SSTP61278 116 aa10.26□□□□□ -0.77
ARFGAP1-216ENST00000522959 LAGE3Q14657 143 aa10.26□□□□□ -0.77
ARFGAP1-216ENST00000522959 NEXN-AS1Q8NBZ9 246 aa10.26□□□□□ -0.77
ARFGAP1-216ENST00000522959 SMIM27A0A1W2PRY6 76 aa10.25□□□□□ -0.77
ARFGAP1-216ENST00000522959 SPANXN1Q5VSR9 72 aa10.25□□□□□ -0.77
ARFGAP1-216ENST00000522959 LYZL1Q6UWQ5 148 aa10.25□□□□□ -0.77
ARFGAP1-216ENST00000522959 NAT8BQ9UHF3 227 aa10.25□□□□□ -0.77
ARFGAP1-216ENST00000522959 IGLV5-52A0A0A0MRZ9 124 aa10.24□□□□□ -0.77
ARFGAP1-216ENST00000522959 HIGD1CA8MV81 97 aa10.24□□□□□ -0.77
ARFGAP1-216ENST00000522959 RHEBQ15382 184 aa10.24□□□□□ -0.77
ARFGAP1-216ENST00000522959 AP1S3Q96PC3 154 aa10.24□□□□□ -0.77
ARFGAP1-216ENST00000522959 TPPP3Q9BW30 176 aa10.24□□□□□ -0.77
ARFGAP1-216ENST00000522959 CTDSP1Q9GZU7 261 aa10.24□□□□□ -0.77
ARFGAP1-216ENST00000522959 FLG2Q5D862 2391 aaPredicted RBP10.23□□□□□ -0.77
ARFGAP1-216ENST00000522959 TRBV7-3A0A075B6L6 115 aa10.23□□□□□ -0.77
ARFGAP1-216ENST00000522959 A0A087WWC5 75 aa10.23□□□□□ -0.77
ARFGAP1-216ENST00000522959 EPM2AB3EWF7 344 aa10.23□□□□□ -0.77
ARFGAP1-216ENST00000522959 RAB4BP61018 213 aa10.23□□□□□ -0.77
ARFGAP1-216ENST00000522959 NTM-AS1Q6ZSK4 140 aa10.23□□□□□ -0.77
ARFGAP1-216ENST00000522959 SLC7A5P1Q8MH63 180 aa10.23□□□□□ -0.77
ARFGAP1-216ENST00000522959 SVBPQ8N300 66 aa10.23□□□□□ -0.77
ARFGAP1-216ENST00000522959 BAALCQ8WXS3 180 aa10.23□□□□□ -0.77
ARFGAP1-216ENST00000522959 BORCS7Q96B45 105 aa10.23□□□□□ -0.77
ARFGAP1-216ENST00000522959 TMEM242Q9NWH2 141 aa10.23□□□□□ -0.77
ARFGAP1-216ENST00000522959 KLK12Q9UKR0 248 aa10.23□□□□□ -0.77
ARFGAP1-216ENST00000522959 TRBV10-1A0A0K0K1A3 114 aa10.22□□□□□ -0.77
ARFGAP1-216ENST00000522959 TRGC1P0CF51 173 aa10.22□□□□□ -0.77
ARFGAP1-216ENST00000522959 LINC01620Q4KN68 170 aa10.22□□□□□ -0.77
ARFGAP1-216ENST00000522959 Q5VSD8 79 aa10.22□□□□□ -0.77
ARFGAP1-216ENST00000522959 NUP35Q8NFH5 326 aa10.22□□□□□ -0.77
ARFGAP1-216ENST00000522959 IMMP2LQ96T52 175 aa10.22□□□□□ -0.77
ARFGAP1-216ENST00000522959 A0A1B0GUT8 65 aa10.21□□□□□ -0.77
ARFGAP1-216ENST00000522959 SNAPINO95295 136 aa10.21□□□□□ -0.77
ARFGAP1-216ENST00000522959 APOC3P02656 99 aa10.21□□□□□ -0.77
ARFGAP1-216ENST00000522959 NTF3P20783 257 aa10.21□□□□□ -0.77
ARFGAP1-216ENST00000522959 RPL36AP83881 106 aaKnown RBP10.21□□□□□ -0.77
ARFGAP1-216ENST00000522959 ZNF56Q15929 161 aa10.21□□□□□ -0.77
ARFGAP1-216ENST00000522959 CLRN3Q8NCR9 226 aa10.21□□□□□ -0.77
ARFGAP1-216ENST00000522959 NTN5Q8WTR8 489 aaPredicted RBP10.21□□□□□ -0.77
ARFGAP1-216ENST00000522959 RPL36ALQ969Q0 106 aaKnown RBP10.21□□□□□ -0.77
ARFGAP1-216ENST00000522959 TRAV8-3A0A0A6YYJ7 113 aa10.2□□□□□ -0.78
ARFGAP1-216ENST00000522959 ENHOQ6UWT2 76 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 136.8 ms