RNA–Protein interactions for RNA: ENST00000521724.5

CTNNA1-230, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,741 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-230ENST00000521724 COL12A1Q99715 3063 aa7.22□□□□□ -1.25
CTNNA1-230ENST00000521724 PRRC2AP48634 2157 aaKnown RBP7.22□□□□□ -1.25
CTNNA1-230ENST00000521724 TRGV11A0A075B6L2 103 aa7.21□□□□□ -1.25
CTNNA1-230ENST00000521724 TRBV7-7A0A0K0K1E9 115 aa7.21□□□□□ -1.25
CTNNA1-230ENST00000521724 TMEM223A0PJW6 202 aa7.21□□□□□ -1.25
CTNNA1-230ENST00000521724 F5H697 171 aa7.21□□□□□ -1.25
CTNNA1-230ENST00000521724 GNRH2O43555 120 aa7.21□□□□□ -1.25
CTNNA1-230ENST00000521724 POLR2KP53803 58 aaKnown RBP7.21□□□□□ -1.25
CTNNA1-230ENST00000521724 ZFAND2AQ8N6M9 145 aa7.21□□□□□ -1.25
CTNNA1-230ENST00000521724 IGHV4OR15-8A0A075B7B6 117 aa7.21□□□□□ -1.26
CTNNA1-230ENST00000521724 A0A087WW49 117 aa7.21□□□□□ -1.26
CTNNA1-230ENST00000521724 ECSCRQ19T08 205 aa7.21□□□□□ -1.26
CTNNA1-230ENST00000521724 ICOSQ9Y6W8 199 aa7.21□□□□□ -1.26
CTNNA1-230ENST00000521724 IGHV7-81A0A0B4J1V7 117 aa7.21□□□□□ -1.26
CTNNA1-230ENST00000521724 SDHAF1A6NFY7 115 aa7.21□□□□□ -1.26
CTNNA1-230ENST00000521724 LINC00694P0DN24 101 aa7.21□□□□□ -1.26
CTNNA1-230ENST00000521724 RNASE4P34096 147 aaKnown RBP7.21□□□□□ -1.26
CTNNA1-230ENST00000521724 LINC00477Q96M19 166 aa7.21□□□□□ -1.26
CTNNA1-230ENST00000521724 OPRPNQ99935 248 aaPredicted RBP7.21□□□□□ -1.26
CTNNA1-230ENST00000521724 COL6A6A6NMZ7 2263 aa7.2□□□□□ -1.26
CTNNA1-230ENST00000521724 RNASE3P12724 160 aaKnown RBP7.2□□□□□ -1.26
CTNNA1-230ENST00000521724 ZNF22P17026 224 aaPredicted RBP7.2□□□□□ -1.26
CTNNA1-230ENST00000521724 UBE2E1P51965 193 aa7.2□□□□□ -1.26
CTNNA1-230ENST00000521724 C9orf153Q5TBE3 101 aa7.2□□□□□ -1.26
CTNNA1-230ENST00000521724 CLEC2BQ92478 149 aa7.2□□□□□ -1.26
CTNNA1-230ENST00000521724 DUX5Q96PT3 197 aa7.2□□□□□ -1.26
CTNNA1-230ENST00000521724 ANKHD1Q8IWZ3 2542 aaKnown RBP7.2□□□□□ -1.26
CTNNA1-230ENST00000521724 AKAP6Q13023 2319 aa7.2□□□□□ -1.26
CTNNA1-230ENST00000521724 SERTAD4-AS1Q5TG53 156 aa7.2□□□□□ -1.26
CTNNA1-230ENST00000521724 NRGNQ92686 78 aa7.2□□□□□ -1.26
CTNNA1-230ENST00000521724 UBTD1Q9HAC8 227 aa7.2□□□□□ -1.26
CTNNA1-230ENST00000521724 ZNF256Q9Y2P7 627 aaPredicted RBP7.2□□□□□ -1.26
CTNNA1-230ENST00000521724 SPTBN4Q9H254 2564 aa7.2□□□□□ -1.26
CTNNA1-230ENST00000521724 HRNRQ86YZ3 2850 aaPredicted RBP7.19□□□□□ -1.26
CTNNA1-230ENST00000521724 A0A0J9YXY3 114 aa7.19□□□□□ -1.26
CTNNA1-230ENST00000521724 MED14OSP0DP75 135 aa7.19□□□□□ -1.26
CTNNA1-230ENST00000521724 LINC01560Q8TB33 94 aa7.19□□□□□ -1.26
CTNNA1-230ENST00000521724 C20orf173Q96LM9 149 aa7.19□□□□□ -1.26
CTNNA1-230ENST00000521724 JPT2Q9H910 190 aa7.19□□□□□ -1.26
CTNNA1-230ENST00000521724 ADARB2-AS1A8MUL3 147 aa7.19□□□□□ -1.26
CTNNA1-230ENST00000521724 OOSP1A8MZH6 123 aa7.19□□□□□ -1.26
CTNNA1-230ENST00000521724 LINC00315P59091 139 aa7.19□□□□□ -1.26
CTNNA1-230ENST00000521724 EBI3Q14213 229 aa7.19□□□□□ -1.26
CTNNA1-230ENST00000521724 SUMO4Q6EEV6 95 aa7.19□□□□□ -1.26
CTNNA1-230ENST00000521724 C9orf139Q6ZV77 190 aa7.19□□□□□ -1.26
CTNNA1-230ENST00000521724 DNAJC30Q96LL9 226 aa7.19□□□□□ -1.26
CTNNA1-230ENST00000521724 ZNF580Q9UK33 172 aa7.19□□□□□ -1.26
CTNNA1-230ENST00000521724 KIF25-AS1Q9Y6Z4 181 aa7.19□□□□□ -1.26
CTNNA1-230ENST00000521724 CHD8Q9HCK8 2581 aa7.18□□□□□ -1.26
CTNNA1-230ENST00000521724 DEFB1P60022 68 aa7.18□□□□□ -1.26
CTNNA1-230ENST00000521724 LY6DQ14210 128 aa7.18□□□□□ -1.26
CTNNA1-230ENST00000521724 POM121L12Q8N7R1 296 aa7.18□□□□□ -1.26
CTNNA1-230ENST00000521724 CSDC2Q9Y534 153 aaKnown RBP7.18□□□□□ -1.26
CTNNA1-230ENST00000521724 SPTBN1Q01082 2364 aaKnown RBP7.18□□□□□ -1.26
CTNNA1-230ENST00000521724 A0A0J9YX75 114 aa7.18□□□□□ -1.26
CTNNA1-230ENST00000521724 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.18□□□□□ -1.26
CTNNA1-230ENST00000521724 NDUFA7O95182 113 aa7.18□□□□□ -1.26
CTNNA1-230ENST00000521724 DEFB121Q5J5C9 76 aa7.18□□□□□ -1.26
CTNNA1-230ENST00000521724 IMUPQ9GZP8 106 aa7.18□□□□□ -1.26
CTNNA1-230ENST00000521724 TRAV8-3A0A0A6YYJ7 113 aa7.17□□□□□ -1.26
CTNNA1-230ENST00000521724 A0A0J9YXV3 536 aa7.17□□□□□ -1.26
CTNNA1-230ENST00000521724 TRBV27A0A0K0K1C4 114 aa7.17□□□□□ -1.26
CTNNA1-230ENST00000521724 IGHV1-69P01742 117 aa7.17□□□□□ -1.26
CTNNA1-230ENST00000521724 FAM74A4Q5TZK3 123 aa7.17□□□□□ -1.26
CTNNA1-230ENST00000521724 CEMP1Q6PRD7 247 aaPredicted RBP7.17□□□□□ -1.26
CTNNA1-230ENST00000521724 C3orf22Q8N5N4 141 aa7.17□□□□□ -1.26
CTNNA1-230ENST00000521724 LY6G5BQ8NDX9 201 aa7.17□□□□□ -1.26
CTNNA1-230ENST00000521724 NCOR2Q9Y618 2525 aa7.17□□□□□ -1.26
CTNNA1-230ENST00000521724 LOC107984640A0A0U1RRK4 108 aa7.17□□□□□ -1.26
CTNNA1-230ENST00000521724 ODF3BA8MYP8 253 aa7.17□□□□□ -1.26
CTNNA1-230ENST00000521724 LST1O00453 97 aa7.17□□□□□ -1.26
CTNNA1-230ENST00000521724 IGHV3-30-3P0DP02 117 aa7.17□□□□□ -1.26
CTNNA1-230ENST00000521724 Q6ZSV7 163 aa7.17□□□□□ -1.26
CTNNA1-230ENST00000521724 VMO1Q7Z5L0 202 aa7.17□□□□□ -1.26
CTNNA1-230ENST00000521724 STHQ8IWL8 128 aa7.17□□□□□ -1.26
CTNNA1-230ENST00000521724 ITLN2Q8WWU7 325 aaPredicted RBP7.17□□□□□ -1.26
CTNNA1-230ENST00000521724 EEF1AKMT3Q96AZ1 226 aa7.17□□□□□ -1.26
CTNNA1-230ENST00000521724 NPFFO15130 113 aa7.16□□□□□ -1.26
CTNNA1-230ENST00000521724 ATP6V0E1O15342 81 aa7.16□□□□□ -1.26
CTNNA1-230ENST00000521724 NPC2P61916 151 aa7.16□□□□□ -1.26
CTNNA1-230ENST00000521724 Q8N6K4 173 aa7.16□□□□□ -1.26
CTNNA1-230ENST00000521724 OVOL1O14753 267 aa7.16□□□□□ -1.26
CTNNA1-230ENST00000521724 UQCRQO14949 82 aa7.16□□□□□ -1.26
CTNNA1-230ENST00000521724 Q8N9W7 124 aa7.16□□□□□ -1.26
CTNNA1-230ENST00000521724 TIMM21Q9BVV7 248 aa7.16□□□□□ -1.26
CTNNA1-230ENST00000521724 U3KQE9 123 aa7.16□□□□□ -1.26
CTNNA1-230ENST00000521724 CELSR1Q9NYQ6 3014 aa7.16□□□□□ -1.26
CTNNA1-230ENST00000521724 USP17L23D6RBM5 183 aa7.15□□□□□ -1.26
CTNNA1-230ENST00000521724 F6UB75 175 aa7.15□□□□□ -1.26
CTNNA1-230ENST00000521724 G3V318 75 aa7.15□□□□□ -1.26
CTNNA1-230ENST00000521724 I3L3M4 83 aa7.15□□□□□ -1.26
CTNNA1-230ENST00000521724 NXPH4O95158 308 aa7.15□□□□□ -1.26
CTNNA1-230ENST00000521724 ACYP1P07311 99 aa7.15□□□□□ -1.26
CTNNA1-230ENST00000521724 HERVK_113P63121 156 aa7.15□□□□□ -1.26
CTNNA1-230ENST00000521724 CDSNQ15517 529 aa7.15□□□□□ -1.26
CTNNA1-230ENST00000521724 C5orf47Q569G3 176 aa7.15□□□□□ -1.26
CTNNA1-230ENST00000521724 LITAFQ99732 161 aa7.15□□□□□ -1.26
CTNNA1-230ENST00000521724 LINC00527Q9UJ94 153 aa7.15□□□□□ -1.26
CTNNA1-230ENST00000521724 TRBV7-1A0A0A6YYK4 115 aa7.15□□□□□ -1.26
CTNNA1-230ENST00000521724 ADAMTSL4-AS1Q5T5F5 129 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms