RNA–Protein interactions for RNA: ENST00000520265.1

VEGFA-221, Transcript of vascular endothelial growth factor A, humanhuman

TSL 5

Gene VEGFA, Length 336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-221ENST00000520265 SUMO4Q6EEV6 95 aa9.53□□□□□ -0.88
VEGFA-221ENST00000520265 SMIM15Q7Z3B0 74 aa9.53□□□□□ -0.88
VEGFA-221ENST00000520265 BORCS7Q96B45 105 aa9.53□□□□□ -0.88
VEGFA-221ENST00000520265 DPH3P1Q9H4G8 78 aa9.53□□□□□ -0.88
VEGFA-221ENST00000520265 CTRLP40313 264 aa9.52□□□□□ -0.89
VEGFA-221ENST00000520265 OR10G8Q8NGN5 311 aa9.52□□□□□ -0.89
VEGFA-221ENST00000520265 TM2D2Q9BX73 214 aa9.52□□□□□ -0.89
VEGFA-221ENST00000520265 KLK12Q9UKR0 248 aa9.52□□□□□ -0.89
VEGFA-221ENST00000520265 TRBV6-8A0A0A6YYG3 113 aa9.51□□□□□ -0.89
VEGFA-221ENST00000520265 TRAV8-3A0A0A6YYJ7 113 aa9.51□□□□□ -0.89
VEGFA-221ENST00000520265 LAGE3Q14657 143 aa9.51□□□□□ -0.89
VEGFA-221ENST00000520265 NIT1Q86X76 327 aa9.51□□□□□ -0.89
VEGFA-221ENST00000520265 PGLYRP4Q96LB8 373 aa9.51□□□□□ -0.89
VEGFA-221ENST00000520265 KIF25-AS1Q9Y6Z4 181 aa9.51□□□□□ -0.89
VEGFA-221ENST00000520265 PKD1P98161 4303 aa9.5□□□□□ -0.89
VEGFA-221ENST00000520265 IGKV2D-24A0A075B6R9 120 aa9.5□□□□□ -0.89
VEGFA-221ENST00000520265 A8MWL6 223 aa9.5□□□□□ -0.89
VEGFA-221ENST00000520265 CRPP02741 224 aa9.5□□□□□ -0.89
VEGFA-221ENST00000520265 SRP19P09132 144 aaKnown RBP9.5□□□□□ -0.89
VEGFA-221ENST00000520265 ELOBQ15370 118 aa9.5□□□□□ -0.89
VEGFA-221ENST00000520265 TEX261Q6UWH6 196 aa9.5□□□□□ -0.89
VEGFA-221ENST00000520265 C15orf54Q8N8G6 183 aa9.5□□□□□ -0.89
VEGFA-221ENST00000520265 UBE2WQ96B02 151 aa9.5□□□□□ -0.89
VEGFA-221ENST00000520265 RMI2Q96E14 147 aa9.5□□□□□ -0.89
VEGFA-221ENST00000520265 PGPEP1Q9NXJ5 209 aa9.5□□□□□ -0.89
VEGFA-221ENST00000520265 LECT2O14960 151 aa9.49□□□□□ -0.89
VEGFA-221ENST00000520265 TMEM97Q5BJF2 176 aa9.49□□□□□ -0.89
VEGFA-221ENST00000520265 RASL11AQ6T310 242 aa9.49□□□□□ -0.89
VEGFA-221ENST00000520265 DEFB104AQ8WTQ1 72 aa9.49□□□□□ -0.89
VEGFA-221ENST00000520265 TRBV25-1A0A075B6N4 114 aa9.48□□□□□ -0.89
VEGFA-221ENST00000520265 M0QY20 66 aa9.48□□□□□ -0.89
VEGFA-221ENST00000520265 ANGP03950 147 aaKnown RBP9.48□□□□□ -0.89
VEGFA-221ENST00000520265 GAGE6Q13070 117 aa9.48□□□□□ -0.89
VEGFA-221ENST00000520265 PEA15Q15121 130 aa9.48□□□□□ -0.89
VEGFA-221ENST00000520265 ADIRFQ15847 76 aa9.48□□□□□ -0.89
VEGFA-221ENST00000520265 FAM231DQ6ZW35 169 aa9.48□□□□□ -0.89
VEGFA-221ENST00000520265 LINC01551Q86U37 167 aa9.48□□□□□ -0.89
VEGFA-221ENST00000520265 GTSF1Q8WW33 167 aa9.48□□□□□ -0.89
VEGFA-221ENST00000520265 DNAJC30Q96LL9 226 aa9.48□□□□□ -0.89
VEGFA-221ENST00000520265 IGLV5-52A0A0A0MRZ9 124 aa9.47□□□□□ -0.89
VEGFA-221ENST00000520265 TRAV26-2A0A0B4J265 109 aa9.47□□□□□ -0.89
VEGFA-221ENST00000520265 IGHV1-24A0A0C4DH33 117 aa9.47□□□□□ -0.89
VEGFA-221ENST00000520265 PKIAP61925 76 aa9.47□□□□□ -0.89
VEGFA-221ENST00000520265 MPV17L2Q567V2 206 aa9.47□□□□□ -0.89
VEGFA-221ENST00000520265 CDPF1Q6NVV7 123 aa9.47□□□□□ -0.89
VEGFA-221ENST00000520265 WDR73Q6P4I2 378 aa9.47□□□□□ -0.89
VEGFA-221ENST00000520265 TMEM241Q24JQ0 296 aa9.46□□□□□ -0.9
VEGFA-221ENST00000520265 CLPSL2Q6UWE3 100 aa9.46□□□□□ -0.9
VEGFA-221ENST00000520265 MAPKAPK5-AS1Q8N8E1 139 aa9.46□□□□□ -0.9
VEGFA-221ENST00000520265 CHCHD7Q9BUK0 85 aa9.46□□□□□ -0.9
VEGFA-221ENST00000520265 HIGD1CA8MV81 97 aa9.45□□□□□ -0.9
VEGFA-221ENST00000520265 UBE2L6O14933 153 aa9.45□□□□□ -0.9
VEGFA-221ENST00000520265 CDK2AP2O75956 126 aa9.45□□□□□ -0.9
VEGFA-221ENST00000520265 CT83Q5H943 113 aa9.45□□□□□ -0.9
VEGFA-221ENST00000520265 NTM-AS1Q6ZSK4 140 aa9.45□□□□□ -0.9
VEGFA-221ENST00000520265 Q8N976 141 aa9.45□□□□□ -0.9
VEGFA-221ENST00000520265 BAALCQ8WXS3 180 aa9.45□□□□□ -0.9
VEGFA-221ENST00000520265 NIT2Q9NQR4 276 aa9.45□□□□□ -0.9
VEGFA-221ENST00000520265 COX11Q9Y6N1 276 aa9.45□□□□□ -0.9
VEGFA-221ENST00000520265 KIAA1109Q2LD37 5005 aa9.44□□□□□ -0.9
VEGFA-221ENST00000520265 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.44□□□□□ -0.9
VEGFA-221ENST00000520265 LRCOL1A6NCL2 159 aa9.44□□□□□ -0.9
VEGFA-221ENST00000520265 FOXA3P55318 350 aaPredicted RBP9.44□□□□□ -0.9
VEGFA-221ENST00000520265 SRSF3P84103 164 aaKnown RBP9.44□□□□□ -0.9
VEGFA-221ENST00000520265 Q0VG73 95 aa9.44□□□□□ -0.9
VEGFA-221ENST00000520265 COTL1Q14019 142 aa9.44□□□□□ -0.9
VEGFA-221ENST00000520265 FAM74A3Q4VXF1 159 aa9.44□□□□□ -0.9
VEGFA-221ENST00000520265 ATRAIDQ6UW56 229 aa9.44□□□□□ -0.9
VEGFA-221ENST00000520265 Q8N814 137 aa9.44□□□□□ -0.9
VEGFA-221ENST00000520265 TSKUQ8WUA8 353 aa9.44□□□□□ -0.9
VEGFA-221ENST00000520265 TMEM243Q9BU79 118 aa9.44□□□□□ -0.9
VEGFA-221ENST00000520265 C1orf43Q9BWL3 253 aa9.44□□□□□ -0.9
VEGFA-221ENST00000520265 CNFNQ9BYD5 112 aa9.44□□□□□ -0.9
VEGFA-221ENST00000520265 OSTCQ9NRP0 149 aa9.44□□□□□ -0.9
VEGFA-221ENST00000520265 NAT8Q9UHE5 227 aa9.44□□□□□ -0.9
VEGFA-221ENST00000520265 A0A1B0GUT8 65 aa9.43□□□□□ -0.9
VEGFA-221ENST00000520265 NDUFS6O75380 124 aaKnown RBP9.43□□□□□ -0.9
VEGFA-221ENST00000520265 GCSHP23434 173 aa9.43□□□□□ -0.9
VEGFA-221ENST00000520265 AMTP48728 403 aa9.43□□□□□ -0.9
VEGFA-221ENST00000520265 RAB14P61106 215 aa9.43□□□□□ -0.9
VEGFA-221ENST00000520265 RPL39LQ96EH5 51 aaKnown RBP9.43□□□□□ -0.9
VEGFA-221ENST00000520265 C9JQL5 133 aa9.42□□□□□ -0.9
VEGFA-221ENST00000520265 HLA-DQA1P01909 254 aa9.42□□□□□ -0.9
VEGFA-221ENST00000520265 RPL23P62829 140 aaKnown RBP9.42□□□□□ -0.9
VEGFA-221ENST00000520265 RBX1P62877 108 aa9.42□□□□□ -0.9
VEGFA-221ENST00000520265 WFDC2Q14508 124 aa9.42□□□□□ -0.9
VEGFA-221ENST00000520265 GATD1Q8NB37 220 aa9.42□□□□□ -0.9
VEGFA-221ENST00000520265 ISOC2Q96AB3 205 aa9.42□□□□□ -0.9
VEGFA-221ENST00000520265 DNAH11Q96DT5 4516 aa9.41□□□□□ -0.9
VEGFA-221ENST00000520265 HERC2O95714 4834 aa9.41□□□□□ -0.9
VEGFA-221ENST00000520265 RIGQ13278 110 aa9.41□□□□□ -0.9
VEGFA-221ENST00000520265 IQCJQ1A5X6 159 aa9.41□□□□□ -0.9
VEGFA-221ENST00000520265 NTN5Q8WTR8 489 aaPredicted RBP9.41□□□□□ -0.9
VEGFA-221ENST00000520265 GFRA4Q9GZZ7 299 aa9.41□□□□□ -0.9
VEGFA-221ENST00000520265 DYNC1H1Q14204 4646 aaKnown RBP9.4□□□□□ -0.9
VEGFA-221ENST00000520265 KRTAP10-1P60331 282 aa9.4□□□□□ -0.9
VEGFA-221ENST00000520265 LINC00269Q8N2A0 174 aa9.4□□□□□ -0.9
VEGFA-221ENST00000520265 V9GYV3 84 aa9.4□□□□□ -0.9
VEGFA-221ENST00000520265 APCSP02743 223 aa9.39□□□□□ -0.91
VEGFA-221ENST00000520265 AMMECR1LQ6DCA0 310 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms