RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 C11orf1Q9H5F2 150 aa9.45□□□□□ -0.9
PCDHGA6-201ENST00000517434 DNAJC9-AS1A6NH13 148 aa9.45□□□□□ -0.9
PCDHGA6-201ENST00000517434 H3BQ85 93 aa9.45□□□□□ -0.9
PCDHGA6-201ENST00000517434 IGLV1-47P01700 117 aa9.45□□□□□ -0.9
PCDHGA6-201ENST00000517434 CFHR3Q02985 330 aa9.45□□□□□ -0.9
PCDHGA6-201ENST00000517434 AJUBAQ96IF1 538 aa9.45□□□□□ -0.9
PCDHGA6-201ENST00000517434 TIMM17AQ99595 171 aa9.45□□□□□ -0.9
PCDHGA6-201ENST00000517434 TRANK1O15050 2925 aa9.45□□□□□ -0.9
PCDHGA6-201ENST00000517434 BAALCQ8WXS3 180 aa9.45□□□□□ -0.9
PCDHGA6-201ENST00000517434 RPL39LQ96EH5 51 aaKnown RBP9.45□□□□□ -0.9
PCDHGA6-201ENST00000517434 VSIG2Q96IQ7 327 aa9.45□□□□□ -0.9
PCDHGA6-201ENST00000517434 MED13Q9UHV7 2174 aa9.44□□□□□ -0.9
PCDHGA6-201ENST00000517434 A6NDX4 124 aa9.44□□□□□ -0.9
PCDHGA6-201ENST00000517434 CGB7P0DN87 165 aa9.44□□□□□ -0.9
PCDHGA6-201ENST00000517434 LMO4P61968 165 aa9.44□□□□□ -0.9
PCDHGA6-201ENST00000517434 TOMM6Q96B49 74 aa9.44□□□□□ -0.9
PCDHGA6-201ENST00000517434 U3KQE9 123 aa9.44□□□□□ -0.9
PCDHGA6-201ENST00000517434 IGLV11-55A0A075B6I3 123 aa9.44□□□□□ -0.9
PCDHGA6-201ENST00000517434 A0A0U1RQV1 116 aa9.44□□□□□ -0.9
PCDHGA6-201ENST00000517434 SLURP1P55000 103 aa9.44□□□□□ -0.9
PCDHGA6-201ENST00000517434 NKAPP1Q8N9T2 125 aa9.44□□□□□ -0.9
PCDHGA6-201ENST00000517434 OPRPNQ99935 248 aaPredicted RBP9.44□□□□□ -0.9
PCDHGA6-201ENST00000517434 PATE2Q6UY27 113 aa9.44□□□□□ -0.9
PCDHGA6-201ENST00000517434 FUSP35637 526 aaKnown RBP eCLIP9.44□□□□□ -0.9
PCDHGA6-201ENST00000517434 IGHV4-31P0DP07 118 aa9.43□□□□□ -0.9
PCDHGA6-201ENST00000517434 NDUFC2-KCTD14E9PQ53 114 aa9.43□□□□□ -0.9
PCDHGA6-201ENST00000517434 ZFP36P26651 326 aaKnown RBP9.43□□□□□ -0.9
PCDHGA6-201ENST00000517434 TRIOO75962 3097 aa9.43□□□□□ -0.9
PCDHGA6-201ENST00000517434 NAV2Q8IVL1 2488 aa9.43□□□□□ -0.9
PCDHGA6-201ENST00000517434 PLA2G2AP14555 144 aa9.43□□□□□ -0.9
PCDHGA6-201ENST00000517434 DEFB136Q30KP8 78 aa9.43□□□□□ -0.9
PCDHGA6-201ENST00000517434 ZNF503Q96F45 646 aa9.43□□□□□ -0.9
PCDHGA6-201ENST00000517434 IMUPQ9GZP8 106 aa9.43□□□□□ -0.9
PCDHGA6-201ENST00000517434 FREM1Q5H8C1 2179 aa9.42□□□□□ -0.9
PCDHGA6-201ENST00000517434 NCOA6Q14686 2063 aaPredicted RBP9.42□□□□□ -0.9
PCDHGA6-201ENST00000517434 TRAV12-2A0A075B6T6 113 aa9.42□□□□□ -0.9
PCDHGA6-201ENST00000517434 TRBV6-1A0A0K0K1D8 114 aa9.42□□□□□ -0.9
PCDHGA6-201ENST00000517434 TEX49A0A1B0GTD5 131 aa9.42□□□□□ -0.9
PCDHGA6-201ENST00000517434 C19orf71A6NCJ1 209 aa9.42□□□□□ -0.9
PCDHGA6-201ENST00000517434 GNRH2O43555 120 aa9.42□□□□□ -0.9
PCDHGA6-201ENST00000517434 NREPQ16612 68 aa9.42□□□□□ -0.9
PCDHGA6-201ENST00000517434 TMEM61Q8N0U2 210 aa9.42□□□□□ -0.9
PCDHGA6-201ENST00000517434 NACAE9PAV3 2078 aa9.42□□□□□ -0.9
PCDHGA6-201ENST00000517434 LECT2O14960 151 aa9.41□□□□□ -0.9
PCDHGA6-201ENST00000517434 ANGP03950 147 aaKnown RBP9.41□□□□□ -0.9
PCDHGA6-201ENST00000517434 Q8N7P7 452 aa9.41□□□□□ -0.9
PCDHGA6-201ENST00000517434 C19orf84I3L1E1 186 aa9.41□□□□□ -0.9
PCDHGA6-201ENST00000517434 TP53TG3Q9ULZ0 132 aa9.41□□□□□ -0.9
PCDHGA6-201ENST00000517434 TRAV4A0A0B4J268 109 aa9.41□□□□□ -0.9
PCDHGA6-201ENST00000517434 TRBV12-3P01733 135 aa9.41□□□□□ -0.9
PCDHGA6-201ENST00000517434 WFDC11Q8NEX6 87 aa9.41□□□□□ -0.9
PCDHGA6-201ENST00000517434 M0QXV9 152 aa9.4□□□□□ -0.9
PCDHGA6-201ENST00000517434 TRAV23DV6A0A075B6W5 121 aa9.4□□□□□ -0.9
PCDHGA6-201ENST00000517434 CCDC179H3BU77 68 aa9.4□□□□□ -0.9
PCDHGA6-201ENST00000517434 C16orf54Q6UWD8 224 aa9.4□□□□□ -0.9
PCDHGA6-201ENST00000517434 Q6YL49 198 aa9.4□□□□□ -0.9
PCDHGA6-201ENST00000517434 COX7B2Q8TF08 81 aa9.4□□□□□ -0.9
PCDHGA6-201ENST00000517434 NOP10Q9NPE3 64 aaKnown RBP9.4□□□□□ -0.9
PCDHGA6-201ENST00000517434 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.4□□□□□ -0.9
PCDHGA6-201ENST00000517434 IGKV2-29A2NJV5 120 aaPredicted RBP9.4□□□□□ -0.9
PCDHGA6-201ENST00000517434 PDE6GP18545 87 aa9.4□□□□□ -0.9
PCDHGA6-201ENST00000517434 IGHV4OR15-8A0A075B7B6 117 aa9.4□□□□□ -0.91
PCDHGA6-201ENST00000517434 A0A087WW49 117 aa9.4□□□□□ -0.91
PCDHGA6-201ENST00000517434 MYO18BQ8IUG5 2567 aa9.4□□□□□ -0.91
PCDHGA6-201ENST00000517434 TP73-AS1Q9UF72 201 aa9.39□□□□□ -0.91
PCDHGA6-201ENST00000517434 EML6Q6ZMW3 1958 aa9.39□□□□□ -0.91
PCDHGA6-201ENST00000517434 CXCL5P42830 114 aa9.39□□□□□ -0.91
PCDHGA6-201ENST00000517434 PCNX3Q9H6A9 2034 aa9.39□□□□□ -0.91
PCDHGA6-201ENST00000517434 I3L2K1 104 aa9.39□□□□□ -0.91
PCDHGA6-201ENST00000517434 ATP5EP2Q5VTU8 51 aa9.39□□□□□ -0.91
PCDHGA6-201ENST00000517434 SPTSSBQ8NFR3 76 aa9.39□□□□□ -0.91
PCDHGA6-201ENST00000517434 C10orf142B7Z368 130 aa9.39□□□□□ -0.91
PCDHGA6-201ENST00000517434 SPRNQ5BIV9 151 aa9.39□□□□□ -0.91
PCDHGA6-201ENST00000517434 K7EIM0 57 aa9.38□□□□□ -0.91
PCDHGA6-201ENST00000517434 IGKV1-17P01599 117 aa9.38□□□□□ -0.91
PCDHGA6-201ENST00000517434 PRB2P02812 416 aaPredicted RBP9.38□□□□□ -0.91
PCDHGA6-201ENST00000517434 XGP55808 180 aa9.38□□□□□ -0.91
PCDHGA6-201ENST00000517434 C1orf195Q5TG92 126 aa9.38□□□□□ -0.91
PCDHGA6-201ENST00000517434 SERP2Q8N6R1 65 aa9.38□□□□□ -0.91
PCDHGA6-201ENST00000517434 MPLKIPQ8TAP9 179 aa9.38□□□□□ -0.91
PCDHGA6-201ENST00000517434 ADAMTS9Q9P2N4 1935 aa9.38□□□□□ -0.91
PCDHGA6-201ENST00000517434 IGKV2D-24A0A075B6R9 120 aa9.37□□□□□ -0.91
PCDHGA6-201ENST00000517434 INAFM1C9JVW0 142 aa9.37□□□□□ -0.91
PCDHGA6-201ENST00000517434 CTSGP08311 255 aa9.37□□□□□ -0.91
PCDHGA6-201ENST00000517434 RPL39P62891 51 aaKnown RBP9.37□□□□□ -0.91
PCDHGA6-201ENST00000517434 BUB3O43684 328 aa9.37□□□□□ -0.91
PCDHGA6-201ENST00000517434 GDF5OSQ5U4N7 250 aa9.37□□□□□ -0.91
PCDHGA6-201ENST00000517434 TMEM256-PLSCR3K7ERE1 68 aa9.37□□□□□ -0.91
PCDHGA6-201ENST00000517434 COX7A2LO14548 114 aa9.37□□□□□ -0.91
PCDHGA6-201ENST00000517434 DAND5Q8N907 189 aa9.37□□□□□ -0.91
PCDHGA6-201ENST00000517434 C20orf173Q96LM9 149 aa9.37□□□□□ -0.91
PCDHGA6-201ENST00000517434 IGLV2-8P01709 118 aa9.37□□□□□ -0.91
PCDHGA6-201ENST00000517434 FGF23Q9GZV9 251 aaPredicted RBP9.37□□□□□ -0.91
PCDHGA6-201ENST00000517434 C14orf132Q9NPU4 83 aa9.37□□□□□ -0.91
PCDHGA6-201ENST00000517434 IGHV1-58A0A0C4DH39 117 aa9.36□□□□□ -0.91
PCDHGA6-201ENST00000517434 SMIM9A6NGZ8 99 aa9.36□□□□□ -0.91
PCDHGA6-201ENST00000517434 COX7CP15954 63 aa9.36□□□□□ -0.91
PCDHGA6-201ENST00000517434 UPK3BQ9BT76 320 aa9.36□□□□□ -0.91
PCDHGA6-201ENST00000517434 NAV3Q8IVL0 2385 aa9.36□□□□□ -0.91
PCDHGA6-201ENST00000517434 P0DMU3 169 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms