RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 GTSF1LQ9H1H1 148 aa4.33□□□□□ -1.72
COPS4-209ENST00000511653 TREM1Q9NP99 234 aa4.33□□□□□ -1.72
COPS4-209ENST00000511653 OTORQ9NRC9 128 aa4.33□□□□□ -1.72
COPS4-209ENST00000511653 KCNIP2Q9NS61 270 aa4.33□□□□□ -1.72
COPS4-209ENST00000511653 PGPA6NDG6 321 aa4.32□□□□□ -1.72
COPS4-209ENST00000511653 C10orf91Q5T1B1 145 aa4.32□□□□□ -1.72
COPS4-209ENST00000511653 TMUB2Q71RG4 321 aa4.32□□□□□ -1.72
COPS4-209ENST00000511653 CMTM2Q8TAZ6 248 aa4.32□□□□□ -1.72
COPS4-209ENST00000511653 CIRBP-AS1Q8TBR5 109 aa4.32□□□□□ -1.72
COPS4-209ENST00000511653 PRAC1Q96KF2 57 aa4.32□□□□□ -1.72
COPS4-209ENST00000511653 C9orf85Q96MD7 179 aa4.32□□□□□ -1.72
COPS4-209ENST00000511653 CHAC1Q9BUX1 264 aa4.32□□□□□ -1.72
COPS4-209ENST00000511653 NMES1Q9C002 83 aa4.32□□□□□ -1.72
COPS4-209ENST00000511653 RNF213Q63HN8 5207 aa4.32□□□□□ -1.72
COPS4-209ENST00000511653 A0A087WYN8 130 aa4.32□□□□□ -1.72
COPS4-209ENST00000511653 FAM74A7A6NL05 159 aa4.32□□□□□ -1.72
COPS4-209ENST00000511653 C17orf112F2Z3M2 114 aa4.32□□□□□ -1.72
COPS4-209ENST00000511653 HMGB3O15347 200 aaKnown RBP4.32□□□□□ -1.72
COPS4-209ENST00000511653 RNASE3P12724 160 aaKnown RBP4.32□□□□□ -1.72
COPS4-209ENST00000511653 HNRNPA3P51991 378 aaKnown RBP4.32□□□□□ -1.72
COPS4-209ENST00000511653 H2BFSP57053 126 aa4.32□□□□□ -1.72
COPS4-209ENST00000511653 RAB2AP61019 212 aa4.32□□□□□ -1.72
COPS4-209ENST00000511653 FAM74A3Q4VXF1 159 aa4.32□□□□□ -1.72
COPS4-209ENST00000511653 ALKAL2Q6UX46 152 aa4.32□□□□□ -1.72
COPS4-209ENST00000511653 KCNS1Q96KK3 526 aa4.32□□□□□ -1.72
COPS4-209ENST00000511653 ATP5SQ99766 215 aa4.32□□□□□ -1.72
COPS4-209ENST00000511653 SMIM3Q9BZL3 60 aa4.32□□□□□ -1.72
COPS4-209ENST00000511653 MBD2Q9UBB5 411 aa4.32□□□□□ -1.72
COPS4-209ENST00000511653 TRAV8-3A0A0A6YYJ7 113 aa4.31□□□□□ -1.72
COPS4-209ENST00000511653 SMIM1B2RUZ4 78 aa4.31□□□□□ -1.72
COPS4-209ENST00000511653 MGST1P10620 155 aaKnown RBP4.31□□□□□ -1.72
COPS4-209ENST00000511653 TAS2R45P59539 299 aa4.31□□□□□ -1.72
COPS4-209ENST00000511653 ZNF345Q14585 488 aa4.31□□□□□ -1.72
COPS4-209ENST00000511653 UQCC3Q6UW78 93 aa4.31□□□□□ -1.72
COPS4-209ENST00000511653 C14orf178Q8N769 122 aaPredicted RBP4.31□□□□□ -1.72
COPS4-209ENST00000511653 SAMD10Q9BYL1 202 aa4.31□□□□□ -1.72
COPS4-209ENST00000511653 NKX6-2Q9C056 277 aaPredicted RBP4.31□□□□□ -1.72
COPS4-209ENST00000511653 PARLQ9H300 379 aa4.31□□□□□ -1.72
COPS4-209ENST00000511653 JPT2Q9H910 190 aa4.31□□□□□ -1.72
COPS4-209ENST00000511653 RAB19A4D1S5 217 aa4.3□□□□□ -1.72
COPS4-209ENST00000511653 RNF222A6NCQ9 220 aa4.3□□□□□ -1.72
COPS4-209ENST00000511653 RBFOX3A6NFN3 312 aa4.3□□□□□ -1.72
COPS4-209ENST00000511653 OXTP01178 125 aa4.3□□□□□ -1.72
COPS4-209ENST00000511653 GCGP01275 180 aa4.3□□□□□ -1.72
COPS4-209ENST00000511653 KIAA1644Q3SXP7 199 aa4.3□□□□□ -1.72
COPS4-209ENST00000511653 PPP1R1CQ8WVI7 109 aa4.3□□□□□ -1.72
COPS4-209ENST00000511653 WFDC1Q9HC57 220 aa4.3□□□□□ -1.72
COPS4-209ENST00000511653 CARHSP1Q9Y2V2 147 aaKnown RBP4.3□□□□□ -1.72
COPS4-209ENST00000511653 IGKV2D-24A0A075B6R9 120 aa4.29□□□□□ -1.72
COPS4-209ENST00000511653 GGTLC3B5MD39 225 aa4.29□□□□□ -1.72
COPS4-209ENST00000511653 F8W036 122 aa4.29□□□□□ -1.72
COPS4-209ENST00000511653 ARPC5O15511 151 aa4.29□□□□□ -1.72
COPS4-209ENST00000511653 SNAPINO95295 136 aa4.29□□□□□ -1.72
COPS4-209ENST00000511653 IGLV2-8P01709 118 aa4.29□□□□□ -1.72
COPS4-209ENST00000511653 ARL14EPLP0DKL9 152 aa4.29□□□□□ -1.72
COPS4-209ENST00000511653 ADCYAP1P18509 176 aa4.29□□□□□ -1.72
COPS4-209ENST00000511653 FAM74A1Q5RGS3 127 aa4.29□□□□□ -1.72
COPS4-209ENST00000511653 UFSP1Q6NVU6 142 aa4.29□□□□□ -1.72
COPS4-209ENST00000511653 NIT1Q86X76 327 aa4.29□□□□□ -1.72
COPS4-209ENST00000511653 KCNRGQ8N5I3 272 aa4.29□□□□□ -1.72
COPS4-209ENST00000511653 PTH2Q96A98 100 aa4.29□□□□□ -1.72
COPS4-209ENST00000511653 LINC00479Q96M42 142 aa4.29□□□□□ -1.72
COPS4-209ENST00000511653 NDFIP1Q9BT67 221 aa4.29□□□□□ -1.72
COPS4-209ENST00000511653 PSG8Q9UQ74 426 aa4.29□□□□□ -1.72
COPS4-209ENST00000511653 IGKV3D-20A0A0C4DH25 116 aa4.29□□□□□ -1.72
COPS4-209ENST00000511653 A0A0D9SG52 128 aa4.29□□□□□ -1.72
COPS4-209ENST00000511653 TAAR5O14804 337 aa4.29□□□□□ -1.72
COPS4-209ENST00000511653 APOC3P02656 99 aa4.29□□□□□ -1.72
COPS4-209ENST00000511653 TCRAP04437 139 aa4.29□□□□□ -1.72
COPS4-209ENST00000511653 CYB561D1Q8N8Q1 229 aa4.29□□□□□ -1.72
COPS4-209ENST00000511653 UBE2WQ96B02 151 aa4.29□□□□□ -1.72
COPS4-209ENST00000511653 C12orf57Q99622 126 aa4.29□□□□□ -1.72
COPS4-209ENST00000511653 KLK12Q9UKR0 248 aa4.29□□□□□ -1.72
COPS4-209ENST00000511653 TNFSF18Q9UNG2 199 aa4.29□□□□□ -1.72
COPS4-209ENST00000511653 TMEM218A2RU14 115 aa4.28□□□□□ -1.72
COPS4-209ENST00000511653 TEX46H3BTG2 121 aa4.28□□□□□ -1.72
COPS4-209ENST00000511653 BCL2L11O43521 198 aa4.28□□□□□ -1.72
COPS4-209ENST00000511653 RPL12P30050 165 aaKnown RBP4.28□□□□□ -1.72
COPS4-209ENST00000511653 ACOT6Q3I5F7 207 aaPredicted RBP4.28□□□□□ -1.72
COPS4-209ENST00000511653 ZFP2Q6ZN57 461 aa4.28□□□□□ -1.72
COPS4-209ENST00000511653 PRNTQ86SH4 94 aa4.28□□□□□ -1.72
COPS4-209ENST00000511653 Q8N976 141 aa4.28□□□□□ -1.72
COPS4-209ENST00000511653 C5orf17Q8NAS9 161 aa4.28□□□□□ -1.72
COPS4-209ENST00000511653 STOML3Q8TAV4 291 aa4.28□□□□□ -1.72
COPS4-209ENST00000511653 SCGB1C1Q8TD33 95 aa4.28□□□□□ -1.72
COPS4-209ENST00000511653 A0A087WWC5 75 aa4.27□□□□□ -1.73
COPS4-209ENST00000511653 FXYD6-FXYD2A0A087WZ82 144 aa4.27□□□□□ -1.73
COPS4-209ENST00000511653 A0A1W2PPV4 95 aa4.27□□□□□ -1.73
COPS4-209ENST00000511653 A8MWV9 139 aa4.27□□□□□ -1.73
COPS4-209ENST00000511653 H3BVH4 76 aa4.27□□□□□ -1.73
COPS4-209ENST00000511653 STAG3L2P0CL84 134 aa4.27□□□□□ -1.73
COPS4-209ENST00000511653 STAG3L3P0CL85 134 aa4.27□□□□□ -1.73
COPS4-209ENST00000511653 SMIM6P0DI80 62 aa4.27□□□□□ -1.73
COPS4-209ENST00000511653 MT1HL1P0DM35 61 aa4.27□□□□□ -1.73
COPS4-209ENST00000511653 CDC34P49427 236 aaPredicted RBP4.27□□□□□ -1.73
COPS4-209ENST00000511653 RPL37AP61513 92 aaKnown RBP4.27□□□□□ -1.73
COPS4-209ENST00000511653 COTL1Q14019 142 aa4.27□□□□□ -1.73
COPS4-209ENST00000511653 OR10G9Q8NGN4 311 aa4.27□□□□□ -1.73
COPS4-209ENST00000511653 OR10G7Q8NGN6 311 aa4.27□□□□□ -1.73
COPS4-209ENST00000511653 RMI2Q96E14 147 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 161.2 ms