RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 A0A0C4DFX4 3053 aa1.68□□□□□ -2.14
HMGB1P47-201ENST00000511281 TANC2Q9HCD6 1990 aa1.67□□□□□ -2.14
HMGB1P47-201ENST00000511281 MUC4Q99102 2169 aa1.67□□□□□ -2.14
HMGB1P47-201ENST00000511281 KMT2BQ9UMN6 2715 aaPredicted RBP1.67□□□□□ -2.14
HMGB1P47-201ENST00000511281 C5orf58C9J3I9 102 aa1.67□□□□□ -2.14
HMGB1P47-201ENST00000511281 DPM2O94777 84 aa1.67□□□□□ -2.14
HMGB1P47-201ENST00000511281 APODP05090 189 aa1.67□□□□□ -2.14
HMGB1P47-201ENST00000511281 CCSMST1Q4G0I0 132 aa1.67□□□□□ -2.14
HMGB1P47-201ENST00000511281 COMMD6Q7Z4G1 85 aa1.67□□□□□ -2.14
HMGB1P47-201ENST00000511281 COX14Q96I36 57 aa1.67□□□□□ -2.14
HMGB1P47-201ENST00000511281 NABP2Q9BQ15 211 aa1.67□□□□□ -2.14
HMGB1P47-201ENST00000511281 HSPB8Q9UJY1 196 aa1.67□□□□□ -2.14
HMGB1P47-201ENST00000511281 CHD3Q12873 2000 aaKnown RBP1.67□□□□□ -2.14
HMGB1P47-201ENST00000511281 ZFC3H1O60293 1989 aaKnown RBP1.67□□□□□ -2.14
HMGB1P47-201ENST00000511281 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.66□□□□□ -2.14
HMGB1P47-201ENST00000511281 TNFSF15O95150 251 aa1.66□□□□□ -2.14
HMGB1P47-201ENST00000511281 GLIPR1L1Q6UWM5 242 aa1.66□□□□□ -2.14
HMGB1P47-201ENST00000511281 C10orf111Q8N326 155 aa1.66□□□□□ -2.14
HMGB1P47-201ENST00000511281 OR51A4Q8NGJ6 313 aa1.66□□□□□ -2.14
HMGB1P47-201ENST00000511281 OR5AK2Q8NH90 309 aa1.66□□□□□ -2.14
HMGB1P47-201ENST00000511281 TSC22D3Q99576 134 aa1.66□□□□□ -2.14
HMGB1P47-201ENST00000511281 TPT1P8Q9HAU6 139 aa1.66□□□□□ -2.14
HMGB1P47-201ENST00000511281 TMEM138Q9NPI0 162 aa1.66□□□□□ -2.14
HMGB1P47-201ENST00000511281 CEP290O15078 2479 aa1.66□□□□□ -2.14
HMGB1P47-201ENST00000511281 MYO15AQ9UKN7 3530 aa1.66□□□□□ -2.14
HMGB1P47-201ENST00000511281 C5orf42Q9H799 3197 aa1.65□□□□□ -2.14
HMGB1P47-201ENST00000511281 ZFHX4Q86UP3 3567 aa1.65□□□□□ -2.15
HMGB1P47-201ENST00000511281 WDFY4Q6ZS81 3184 aa1.65□□□□□ -2.15
HMGB1P47-201ENST00000511281 A0A087WXM4 84 aa1.65□□□□□ -2.15
HMGB1P47-201ENST00000511281 GNGT2O14610 69 aa1.65□□□□□ -2.15
HMGB1P47-201ENST00000511281 UQCRQO14949 82 aa1.65□□□□□ -2.15
HMGB1P47-201ENST00000511281 HBDP02042 147 aa1.65□□□□□ -2.15
HMGB1P47-201ENST00000511281 DBIP07108 87 aaKnown RBP1.65□□□□□ -2.15
HMGB1P47-201ENST00000511281 ASB16-AS1Q495Z4 193 aa1.65□□□□□ -2.15
HMGB1P47-201ENST00000511281 MORN2Q502X0 79 aa1.65□□□□□ -2.15
HMGB1P47-201ENST00000511281 C8orf59Q8N0T1 100 aaPredicted RBP1.65□□□□□ -2.15
HMGB1P47-201ENST00000511281 PLPP5Q8NEB5 264 aa1.65□□□□□ -2.15
HMGB1P47-201ENST00000511281 BRK1Q8WUW1 75 aa1.65□□□□□ -2.15
HMGB1P47-201ENST00000511281 LZICQ8WZA0 190 aa1.65□□□□□ -2.15
HMGB1P47-201ENST00000511281 DMDP11532 3685 aa1.65□□□□□ -2.15
HMGB1P47-201ENST00000511281 F5P12259 2224 aa1.64□□□□□ -2.15
HMGB1P47-201ENST00000511281 A0A0J9YY99 117 aa1.64□□□□□ -2.15
HMGB1P47-201ENST00000511281 LOC100130705A0A1B0GUX0 176 aa1.64□□□□□ -2.15
HMGB1P47-201ENST00000511281 LOC107986453A0A1B0GWG9 222 aa1.64□□□□□ -2.15
HMGB1P47-201ENST00000511281 C10orf142B7Z368 130 aa1.64□□□□□ -2.15
HMGB1P47-201ENST00000511281 M0QZK8 103 aa1.64□□□□□ -2.15
HMGB1P47-201ENST00000511281 DNAL4O96015 105 aa1.64□□□□□ -2.15
HMGB1P47-201ENST00000511281 STATHP02808 62 aa1.64□□□□□ -2.15
HMGB1P47-201ENST00000511281 CMPK1P30085 196 aa1.64□□□□□ -2.15
HMGB1P47-201ENST00000511281 LSM3P62310 102 aaKnown RBP1.64□□□□□ -2.15
HMGB1P47-201ENST00000511281 NEDD8Q15843 81 aa1.64□□□□□ -2.15
HMGB1P47-201ENST00000511281 LCN9Q8WX39 176 aa1.64□□□□□ -2.15
HMGB1P47-201ENST00000511281 SCN3BQ9NY72 215 aa1.64□□□□□ -2.15
HMGB1P47-201ENST00000511281 TNFSF18Q9UNG2 199 aa1.64□□□□□ -2.15
HMGB1P47-201ENST00000511281 C22orf24Q9Y442 160 aa1.64□□□□□ -2.15
HMGB1P47-201ENST00000511281 MPC1Q9Y5U8 109 aa1.64□□□□□ -2.15
HMGB1P47-201ENST00000511281 DSPPQ9NZW4 1301 aa1.64□□□□□ -2.15
HMGB1P47-201ENST00000511281 DCHS1Q96JQ0 3298 aa1.64□□□□□ -2.15
HMGB1P47-201ENST00000511281 PATJQ8NI35 1801 aa1.63□□□□□ -2.15
HMGB1P47-201ENST00000511281 TRANK1O15050 2925 aa1.63□□□□□ -2.15
HMGB1P47-201ENST00000511281 DNAH14Q0VDD8 3507 aa1.63□□□□□ -2.15
HMGB1P47-201ENST00000511281 TMEM189A5PLL7 270 aa1.63□□□□□ -2.15
HMGB1P47-201ENST00000511281 EFCAB10A6NFE3 127 aa1.63□□□□□ -2.15
HMGB1P47-201ENST00000511281 C9JAW5 83 aa1.63□□□□□ -2.15
HMGB1P47-201ENST00000511281 H0YGG7 62 aa1.63□□□□□ -2.15
HMGB1P47-201ENST00000511281 HMGN4O00479 90 aa1.63□□□□□ -2.15
HMGB1P47-201ENST00000511281 TNFP01375 233 aa1.63□□□□□ -2.15
HMGB1P47-201ENST00000511281 IFI6P09912 130 aa1.63□□□□□ -2.15
HMGB1P47-201ENST00000511281 SLC25A4P12235 298 aa1.63□□□□□ -2.15
HMGB1P47-201ENST00000511281 SMIM11AP58511 58 aa1.63□□□□□ -2.15
HMGB1P47-201ENST00000511281 SELENOWP63302 87 aa1.63□□□□□ -2.15
HMGB1P47-201ENST00000511281 XAF1Q6GPH4 301 aa1.63□□□□□ -2.15
HMGB1P47-201ENST00000511281 SLC48A1Q6P1K1 146 aa1.63□□□□□ -2.15
HMGB1P47-201ENST00000511281 LINC00299Q6ZSB3 139 aa1.63□□□□□ -2.15
HMGB1P47-201ENST00000511281 TSTD1Q8NFU3 115 aa1.63□□□□□ -2.15
HMGB1P47-201ENST00000511281 CIB3Q96Q77 187 aaPredicted RBP1.63□□□□□ -2.15
HMGB1P47-201ENST00000511281 FKBP11Q9NYL4 201 aa1.63□□□□□ -2.15
HMGB1P47-201ENST00000511281 CALML5Q9NZT1 146 aa1.63□□□□□ -2.15
HMGB1P47-201ENST00000511281 HIGD1AQ9Y241 93 aa1.63□□□□□ -2.15
HMGB1P47-201ENST00000511281 ROS1P08922 2347 aa1.63□□□□□ -2.15
HMGB1P47-201ENST00000511281 MYO7AQ13402 2215 aa1.63□□□□□ -2.15
HMGB1P47-201ENST00000511281 MYH9P35579 1960 aaKnown RBP1.62□□□□□ -2.15
HMGB1P47-201ENST00000511281 SPTY2D1-AS1A0A0U1RR47 76 aa1.62□□□□□ -2.15
HMGB1P47-201ENST00000511281 JMJD7-PLA2G4BH0Y9G9 81 aa1.62□□□□□ -2.15
HMGB1P47-201ENST00000511281 M0R129 80 aa1.62□□□□□ -2.15
HMGB1P47-201ENST00000511281 HMGN2P05204 90 aaKnown RBP1.62□□□□□ -2.15
HMGB1P47-201ENST00000511281 PIPP12273 146 aaPredicted RBP1.62□□□□□ -2.15
HMGB1P47-201ENST00000511281 SNRPGP62308 76 aaKnown RBP1.62□□□□□ -2.15
HMGB1P47-201ENST00000511281 BLCAPP62952 87 aa1.62□□□□□ -2.15
HMGB1P47-201ENST00000511281 QRFPP83859 136 aa1.62□□□□□ -2.15
HMGB1P47-201ENST00000511281 SPCS2Q15005 226 aa1.62□□□□□ -2.15
HMGB1P47-201ENST00000511281 C12orf73Q69YU5 71 aa1.62□□□□□ -2.15
HMGB1P47-201ENST00000511281 CASC2Q6XLA1 102 aa1.62□□□□□ -2.15
HMGB1P47-201ENST00000511281 TCTE3Q8IZS6 198 aa1.62□□□□□ -2.15
HMGB1P47-201ENST00000511281 WFDC6Q9BQY6 131 aa1.62□□□□□ -2.15
HMGB1P47-201ENST00000511281 TSC2P49815 1807 aa1.61□□□□□ -2.15
HMGB1P47-201ENST00000511281 A0A1B0GW64 132 aa1.61□□□□□ -2.15
HMGB1P47-201ENST00000511281 CPSF4LA6NMK7 179 aaKnown RBP1.61□□□□□ -2.15
HMGB1P47-201ENST00000511281 ARPC5O15511 151 aa1.61□□□□□ -2.15
HMGB1P47-201ENST00000511281 KLF7O75840 302 aaPredicted RBP1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms