RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 P01737 135 aa9.68□□□□□ -0.86
HDAC6-236ENST00000498808 TMEM97Q5BJF2 176 aa9.68□□□□□ -0.86
HDAC6-236ENST00000498808 C15orf56Q8N910 161 aa9.68□□□□□ -0.86
HDAC6-236ENST00000498808 DERL1Q9BUN8 251 aa9.68□□□□□ -0.86
HDAC6-236ENST00000498808 GFRA4Q9GZZ7 299 aa9.68□□□□□ -0.86
HDAC6-236ENST00000498808 TMEM167BQ9NRX6 74 aa9.68□□□□□ -0.86
HDAC6-236ENST00000498808 TRBV25-1A0A075B6N4 114 aa9.67□□□□□ -0.86
HDAC6-236ENST00000498808 RAB5CP51148 216 aa9.67□□□□□ -0.86
HDAC6-236ENST00000498808 LINC01559Q495D7 138 aa9.67□□□□□ -0.86
HDAC6-236ENST00000498808 COX8CQ7Z4L0 72 aa9.67□□□□□ -0.86
HDAC6-236ENST00000498808 A0A1W2PRE2 83 aa9.66□□□□□ -0.86
HDAC6-236ENST00000498808 IQCJQ1A5X6 159 aa9.66□□□□□ -0.86
HDAC6-236ENST00000498808 FAM162BQ5T6X4 162 aa9.66□□□□□ -0.86
HDAC6-236ENST00000498808 IGLV4-60A0A075B6I1 120 aa9.65□□□□□ -0.86
HDAC6-236ENST00000498808 PEX7O00628 323 aa9.65□□□□□ -0.86
HDAC6-236ENST00000498808 CXorf1O96002 111 aa9.65□□□□□ -0.86
HDAC6-236ENST00000498808 GZMBP10144 247 aa9.65□□□□□ -0.86
HDAC6-236ENST00000498808 RPS10P46783 165 aaKnown RBP9.65□□□□□ -0.86
HDAC6-236ENST00000498808 OR10AG1Q8NH19 301 aa9.65□□□□□ -0.86
HDAC6-236ENST00000498808 FAT4Q6V0I7 4981 aa9.65□□□□□ -0.86
HDAC6-236ENST00000498808 A0A096LNI7 61 aa9.64□□□□□ -0.87
HDAC6-236ENST00000498808 IFNA7P01567 189 aa9.64□□□□□ -0.87
HDAC6-236ENST00000498808 ZNF674Q2M3X9 581 aa9.64□□□□□ -0.87
HDAC6-236ENST00000498808 IGHV1-24A0A0C4DH33 117 aa9.63□□□□□ -0.87
HDAC6-236ENST00000498808 PET100P0DJ07 73 aa9.63□□□□□ -0.87
HDAC6-236ENST00000498808 ZFP30Q9Y2G7 519 aa9.63□□□□□ -0.87
HDAC6-236ENST00000498808 F5H697 171 aa9.62□□□□□ -0.87
HDAC6-236ENST00000498808 H7C1H1 209 aa9.62□□□□□ -0.87
HDAC6-236ENST00000498808 HIGD2BQ4VC39 106 aa9.62□□□□□ -0.87
HDAC6-236ENST00000498808 INO80EQ8NBZ0 244 aaPredicted RBP9.62□□□□□ -0.87
HDAC6-236ENST00000498808 A0A1B0GUV1 79 aa9.61□□□□□ -0.87
HDAC6-236ENST00000498808 ATP6V0CP27449 155 aa9.61□□□□□ -0.87
HDAC6-236ENST00000498808 UBE2G2P60604 165 aa9.61□□□□□ -0.87
HDAC6-236ENST00000498808 Q6ZRP5 223 aa9.61□□□□□ -0.87
HDAC6-236ENST00000498808 PSMG3Q9BT73 122 aaPredicted RBP9.61□□□□□ -0.87
HDAC6-236ENST00000498808 CCDC32Q9BV29 185 aa9.61□□□□□ -0.87
HDAC6-236ENST00000498808 MUC21A0A140T8X8 626 aa9.6□□□□□ -0.87
HDAC6-236ENST00000498808 MZT2BQ6NZ67 158 aa9.6□□□□□ -0.87
HDAC6-236ENST00000498808 HIST1H2BAQ96A08 127 aa9.6□□□□□ -0.87
HDAC6-236ENST00000498808 AQP10Q96PS8 301 aa9.6□□□□□ -0.87
HDAC6-236ENST00000498808 ZNF471Q9BX82 626 aaPredicted RBP9.6□□□□□ -0.87
HDAC6-236ENST00000498808 ACTR3CQ9C0K3 210 aaPredicted RBP9.6□□□□□ -0.87
HDAC6-236ENST00000498808 GAGE12HA6NDE8 117 aa9.59□□□□□ -0.87
HDAC6-236ENST00000498808 MBP02144 154 aa9.59□□□□□ -0.87
HDAC6-236ENST00000498808 DEFA3P59666 94 aa9.59□□□□□ -0.87
HDAC6-236ENST00000498808 CFAP161Q6P656 301 aa9.59□□□□□ -0.87
HDAC6-236ENST00000498808 A0A0U1RQV1 116 aa9.58□□□□□ -0.88
HDAC6-236ENST00000498808 FAM231BA6NCW3 169 aa9.58□□□□□ -0.88
HDAC6-236ENST00000498808 FAM74A7A6NL05 159 aa9.58□□□□□ -0.88
HDAC6-236ENST00000498808 SNAI2O43623 268 aa9.58□□□□□ -0.88
HDAC6-236ENST00000498808 SERF2P84101 59 aa9.58□□□□□ -0.88
HDAC6-236ENST00000498808 ZNF726P1Q15940 193 aa9.58□□□□□ -0.88
HDAC6-236ENST00000498808 LCE2AQ5TA79 106 aaPredicted RBP9.58□□□□□ -0.88
HDAC6-236ENST00000498808 FMC1Q96HJ9 113 aa9.58□□□□□ -0.88
HDAC6-236ENST00000498808 TMEM243Q9BU79 118 aa9.58□□□□□ -0.88
HDAC6-236ENST00000498808 LTAP01374 205 aa9.57□□□□□ -0.88
HDAC6-236ENST00000498808 SULT1A2P50226 295 aa9.57□□□□□ -0.88
HDAC6-236ENST00000498808 UBE2G1P62253 170 aa9.57□□□□□ -0.88
HDAC6-236ENST00000498808 SSBP4Q9BWG4 385 aaPredicted RBP9.57□□□□□ -0.88
HDAC6-236ENST00000498808 TNFSF18Q9UNG2 199 aa9.57□□□□□ -0.88
HDAC6-236ENST00000498808 GVQW2A0A096LPI5 108 aaPredicted RBP9.56□□□□□ -0.88
HDAC6-236ENST00000498808 CXCL1P09341 107 aa9.56□□□□□ -0.88
HDAC6-236ENST00000498808 SSTP61278 116 aa9.56□□□□□ -0.88
HDAC6-236ENST00000498808 SPANXN1Q5VSR9 72 aa9.56□□□□□ -0.88
HDAC6-236ENST00000498808 ENKURQ8TC29 256 aa9.56□□□□□ -0.88
HDAC6-236ENST00000498808 LINC00474Q9P2X8 69 aa9.56□□□□□ -0.88
HDAC6-236ENST00000498808 A6NHS1 94 aa9.55□□□□□ -0.88
HDAC6-236ENST00000498808 M0QY20 66 aa9.55□□□□□ -0.88
HDAC6-236ENST00000498808 OR5AL1P0C617 328 aa9.55□□□□□ -0.88
HDAC6-236ENST00000498808 NKX6-2Q9C056 277 aaPredicted RBP9.55□□□□□ -0.88
HDAC6-236ENST00000498808 INMT-MINDY4F8WBC2 141 aa9.54□□□□□ -0.88
HDAC6-236ENST00000498808 ZNF664Q8N3J9 261 aa9.54□□□□□ -0.88
HDAC6-236ENST00000498808 PSORS1C2Q9UIG4 136 aa9.54□□□□□ -0.88
HDAC6-236ENST00000498808 IGKV3OR2-268A0A0C4DH90 116 aa9.53□□□□□ -0.88
HDAC6-236ENST00000498808 CTXND1A0A1B0GTU2 59 aa9.53□□□□□ -0.88
HDAC6-236ENST00000498808 SSNA1O43805 119 aa9.53□□□□□ -0.88
HDAC6-236ENST00000498808 SMIM17P0DL12 118 aa9.53□□□□□ -0.88
HDAC6-236ENST00000498808 NKX2-5P52952 324 aaPredicted RBP9.53□□□□□ -0.88
HDAC6-236ENST00000498808 PRR26Q8N8Z3 221 aa9.53□□□□□ -0.88
HDAC6-236ENST00000498808 AP1S3Q96PC3 154 aa9.53□□□□□ -0.88
HDAC6-236ENST00000498808 SUMO4Q6EEV6 95 aa9.52□□□□□ -0.89
HDAC6-236ENST00000498808 CHCHD10Q8WYQ3 142 aaPredicted RBP9.52□□□□□ -0.89
HDAC6-236ENST00000498808 TRAV26-2A0A0B4J265 109 aa9.51□□□□□ -0.89
HDAC6-236ENST00000498808 MGPP08493 103 aa9.51□□□□□ -0.89
HDAC6-236ENST00000498808 PGLYRP4Q96LB8 373 aa9.51□□□□□ -0.89
HDAC6-236ENST00000498808 UBE2L6O14933 153 aa9.5□□□□□ -0.89
HDAC6-236ENST00000498808 AKR1C3P42330 323 aa9.5□□□□□ -0.89
HDAC6-236ENST00000498808 CACNG7P62955 275 aa9.5□□□□□ -0.89
HDAC6-236ENST00000498808 LINC00526Q96FQ7 95 aa9.5□□□□□ -0.89
HDAC6-236ENST00000498808 FOXI1Q12951 378 aa9.49□□□□□ -0.89
HDAC6-236ENST00000498808 CARD19Q96LW7 228 aa9.49□□□□□ -0.89
HDAC6-236ENST00000498808 MARVELD1Q9BSK0 173 aa9.49□□□□□ -0.89
HDAC6-236ENST00000498808 PKIGQ9Y2B9 76 aa9.49□□□□□ -0.89
HDAC6-236ENST00000498808 AMTP48728 403 aa9.48□□□□□ -0.89
HDAC6-236ENST00000498808 MLST8Q9BVC4 326 aa9.48□□□□□ -0.89
HDAC6-236ENST00000498808 A0A1W2PNN7 141 aa9.47□□□□□ -0.89
HDAC6-236ENST00000498808 PTTG1IPP53801 180 aa9.47□□□□□ -0.89
HDAC6-236ENST00000498808 PRR4Q16378 134 aa9.47□□□□□ -0.89
HDAC6-236ENST00000498808 RASL11AQ6T310 242 aa9.47□□□□□ -0.89
HDAC6-236ENST00000498808 TCEAL7Q9BRU2 100 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms