RNA–Protein interactions for RNA: ENST00000497943.1

SUN1-235, Transcript of Sad1 and UNC84 domain containing 1, humanhuman

TSL 2

Gene SUN1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUN1-235ENST00000497943 TCTEX1D4Q5JR98 221 aa12.84□□□□□ -0.35
SUN1-235ENST00000497943 VPREB3Q9UKI3 123 aa12.84□□□□□ -0.35
SUN1-235ENST00000497943 SH2D6Q7Z4S9 175 aa12.84□□□□□ -0.35
SUN1-235ENST00000497943 RPL32P62910 135 aaKnown RBP12.83□□□□□ -0.36
SUN1-235ENST00000497943 SRSF9Q13242 221 aaKnown RBP eCLIP12.83□□□□□ -0.36
SUN1-235ENST00000497943 RRN3P1Q2M238 152 aa12.83□□□□□ -0.36
SUN1-235ENST00000497943 CHD6Q8TD26 2715 aa12.83□□□□□ -0.36
SUN1-235ENST00000497943 DSCR9P59020 149 aa12.83□□□□□ -0.36
SUN1-235ENST00000497943 IGHV3-64A0A075B6Q5 118 aa12.82□□□□□ -0.36
SUN1-235ENST00000497943 BBC3Q96PG8 261 aaPredicted RBP12.82□□□□□ -0.36
SUN1-235ENST00000497943 AKAP9Q99996 3911 aa12.82□□□□□ -0.36
SUN1-235ENST00000497943 DEFB131AP59861 70 aa12.82□□□□□ -0.36
SUN1-235ENST00000497943 A0A1B0GWB2 263 aa12.81□□□□□ -0.36
SUN1-235ENST00000497943 Q6YL49 198 aa12.81□□□□□ -0.36
SUN1-235ENST00000497943 PGPEP1Q9NXJ5 209 aa12.81□□□□□ -0.36
SUN1-235ENST00000497943 NIPBLQ6KC79 2804 aaeCLIP12.81□□□□□ -0.36
SUN1-235ENST00000497943 TRBV6-5A0A0K0K1A5 114 aa12.81□□□□□ -0.36
SUN1-235ENST00000497943 LINC01549A6NIU2 74 aa12.81□□□□□ -0.36
SUN1-235ENST00000497943 ODF3Q96PU9 254 aa12.81□□□□□ -0.36
SUN1-235ENST00000497943 SETD2Q9BYW2 2564 aaPredicted RBP12.81□□□□□ -0.36
SUN1-235ENST00000497943 RBMY1BA6NDE4 496 aaKnown RBP12.8□□□□□ -0.36
SUN1-235ENST00000497943 RBMY1EA6NEQ0 496 aaKnown RBP12.8□□□□□ -0.36
SUN1-235ENST00000497943 APOMO95445 188 aa12.8□□□□□ -0.36
SUN1-235ENST00000497943 RBMY1DP0C7P1 496 aaKnown RBP12.8□□□□□ -0.36
SUN1-235ENST00000497943 IGHV4-31P0DP07 118 aa12.8□□□□□ -0.36
SUN1-235ENST00000497943 SYT8Q8NBV8 401 aa12.8□□□□□ -0.36
SUN1-235ENST00000497943 A0A0J9YY99 117 aa12.8□□□□□ -0.36
SUN1-235ENST00000497943 SAMD13Q5VXD3 122 aa12.8□□□□□ -0.36
SUN1-235ENST00000497943 TIMM17AQ99595 171 aa12.8□□□□□ -0.36
SUN1-235ENST00000497943 LINC01619G3V211 115 aa12.79□□□□□ -0.36
SUN1-235ENST00000497943 ETDBQ3ZM63 59 aa12.79□□□□□ -0.36
SUN1-235ENST00000497943 CEMP1Q6PRD7 247 aaPredicted RBP12.79□□□□□ -0.36
SUN1-235ENST00000497943 TMEM141Q96I45 108 aa12.79□□□□□ -0.36
SUN1-235ENST00000497943 UBE2E2Q96LR5 201 aa12.79□□□□□ -0.36
SUN1-235ENST00000497943 PRRC2AP48634 2157 aaKnown RBP12.79□□□□□ -0.36
SUN1-235ENST00000497943 WNK1Q9H4A3 2382 aa12.79□□□□□ -0.36
SUN1-235ENST00000497943 ELANEP08246 267 aa12.79□□□□□ -0.36
SUN1-235ENST00000497943 TMEM89A2RUT3 159 aa12.78□□□□□ -0.36
SUN1-235ENST00000497943 CR1P17927 2039 aa12.78□□□□□ -0.36
SUN1-235ENST00000497943 UBR5O95071 2799 aaPredicted RBP12.78□□□□□ -0.36
SUN1-235ENST00000497943 AMELXQ99217 191 aa12.78□□□□□ -0.36
SUN1-235ENST00000497943 MRPL16Q9NX20 251 aaKnown RBP12.78□□□□□ -0.36
SUN1-235ENST00000497943 NOTCH3Q9UM47 2321 aa12.77□□□□□ -0.36
SUN1-235ENST00000497943 FSHBP01225 129 aa12.77□□□□□ -0.36
SUN1-235ENST00000497943 RNASE13Q5GAN3 156 aaKnown RBP12.77□□□□□ -0.36
SUN1-235ENST00000497943 Q6ZSN1 163 aa12.77□□□□□ -0.36
SUN1-235ENST00000497943 TRPT1Q86TN4 253 aaKnown RBP12.77□□□□□ -0.36
SUN1-235ENST00000497943 SPANXB1Q9NS25 103 aaPredicted RBP12.77□□□□□ -0.37
SUN1-235ENST00000497943 APCP25054 2843 aa12.76□□□□□ -0.37
SUN1-235ENST00000497943 A0A0J9YXV3 536 aa12.76□□□□□ -0.37
SUN1-235ENST00000497943 J3QLI3 93 aa12.76□□□□□ -0.37
SUN1-235ENST00000497943 INSL3P51460 131 aa12.76□□□□□ -0.37
SUN1-235ENST00000497943 KHDC1LQ5JSQ8 128 aa12.76□□□□□ -0.37
SUN1-235ENST00000497943 CCDC168Q8NDH2 2452 aa12.76□□□□□ -0.37
SUN1-235ENST00000497943 TMEM61Q8N0U2 210 aa12.76□□□□□ -0.37
SUN1-235ENST00000497943 C20orf203Q8NBC4 194 aa12.76□□□□□ -0.37
SUN1-235ENST00000497943 PRO0461Q9UI25 63 aa12.76□□□□□ -0.37
SUN1-235ENST00000497943 UBE2D1P51668 147 aa12.75□□□□□ -0.37
SUN1-235ENST00000497943 HERVK_113P61574 105 aa12.75□□□□□ -0.37
SUN1-235ENST00000497943 J3QQQ9 107 aa12.75□□□□□ -0.37
SUN1-235ENST00000497943 TSPAN13O95857 204 aa12.75□□□□□ -0.37
SUN1-235ENST00000497943 COTL1Q14019 142 aa12.75□□□□□ -0.37
SUN1-235ENST00000497943 NSUN5P1Q3KNT7 163 aa12.75□□□□□ -0.37
SUN1-235ENST00000497943 NACAE9PAV3 2078 aa12.74□□□□□ -0.37
SUN1-235ENST00000497943 LOC107984156A0A0G2JMH3 177 aa12.74□□□□□ -0.37
SUN1-235ENST00000497943 H3BMM0 161 aa12.74□□□□□ -0.37
SUN1-235ENST00000497943 I3L3M4 83 aa12.74□□□□□ -0.37
SUN1-235ENST00000497943 GAGE13Q4V321 117 aa12.74□□□□□ -0.37
SUN1-235ENST00000497943 ARL17AQ8IVW1 177 aa12.74□□□□□ -0.37
SUN1-235ENST00000497943 FAM104AQ969W3 186 aa12.74□□□□□ -0.37
SUN1-235ENST00000497943 SPAG8Q99932 426 aaPredicted RBP12.74□□□□□ -0.37
SUN1-235ENST00000497943 IGLV4-3A0A075B6K6 122 aa12.74□□□□□ -0.37
SUN1-235ENST00000497943 F8W1H4 67 aa12.74□□□□□ -0.37
SUN1-235ENST00000497943 PAPPA-AS1Q5QFB9 102 aa12.74□□□□□ -0.37
SUN1-235ENST00000497943 IGHV3-30P01768 117 aa12.73□□□□□ -0.37
SUN1-235ENST00000497943 IGHV3-30-5P0DP03 117 aa12.73□□□□□ -0.37
SUN1-235ENST00000497943 C11orf44Q8N8P7 122 aa12.73□□□□□ -0.37
SUN1-235ENST00000497943 DLX4Q92988 240 aaPredicted RBP12.73□□□□□ -0.37
SUN1-235ENST00000497943 ADARB2-AS1A8MUL3 147 aa12.73□□□□□ -0.37
SUN1-235ENST00000497943 CFC1BP0CG36 223 aa12.72□□□□□ -0.37
SUN1-235ENST00000497943 CFC1P0CG37 223 aa12.72□□□□□ -0.37
SUN1-235ENST00000497943 ZNF22P17026 224 aaPredicted RBP12.72□□□□□ -0.37
SUN1-235ENST00000497943 TRGV11A0A075B6L2 103 aa12.72□□□□□ -0.37
SUN1-235ENST00000497943 RHOHQ15669 191 aa12.72□□□□□ -0.37
SUN1-235ENST00000497943 NDUFA11Q86Y39 141 aa12.72□□□□□ -0.37
SUN1-235ENST00000497943 SLC25A29Q8N8R3 303 aa12.72□□□□□ -0.37
SUN1-235ENST00000497943 TMEM223A0PJW6 202 aa12.71□□□□□ -0.37
SUN1-235ENST00000497943 SMCPP49901 116 aaPredicted RBP12.71□□□□□ -0.37
SUN1-235ENST00000497943 LGALS3P17931 250 aaKnown RBP12.71□□□□□ -0.37
SUN1-235ENST00000497943 PSMB2P49721 201 aa12.71□□□□□ -0.37
SUN1-235ENST00000497943 Q5PR19 223 aa12.71□□□□□ -0.37
SUN1-235ENST00000497943 NFE4Q86UQ8 179 aa12.71□□□□□ -0.37
SUN1-235ENST00000497943 RNF152Q8N8N0 203 aa12.71□□□□□ -0.37
SUN1-235ENST00000497943 ITPR3Q14573 2671 aa12.7□□□□□ -0.38
SUN1-235ENST00000497943 EIF4EBP3O60516 100 aaPredicted RBP12.7□□□□□ -0.38
SUN1-235ENST00000497943 CD28P10747 220 aa12.7□□□□□ -0.38
SUN1-235ENST00000497943 VCX2Q9H322 139 aa12.7□□□□□ -0.38
SUN1-235ENST00000497943 IGHV3-38A0A0C4DH36 116 aa12.7□□□□□ -0.38
SUN1-235ENST00000497943 Q96MF0 132 aa12.7□□□□□ -0.38
SUN1-235ENST00000497943 SPXQ9BT56 116 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms