RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 Q6ZSA8 131 aa9.39□□□□□ -0.91
VTI1A-209ENST00000496445 UBE2WQ96B02 151 aa9.39□□□□□ -0.91
VTI1A-209ENST00000496445 COX11Q9Y6N1 276 aa9.39□□□□□ -0.91
VTI1A-209ENST00000496445 FLG2Q5D862 2391 aaPredicted RBP9.39□□□□□ -0.91
VTI1A-209ENST00000496445 PKHD1L1Q86WI1 4243 aa9.39□□□□□ -0.91
VTI1A-209ENST00000496445 A0A087WX48 190 aa9.38□□□□□ -0.91
VTI1A-209ENST00000496445 GZMBP10144 247 aa9.38□□□□□ -0.91
VTI1A-209ENST00000496445 SULT1A2P50226 295 aa9.38□□□□□ -0.91
VTI1A-209ENST00000496445 RAB5CP51148 216 aa9.38□□□□□ -0.91
VTI1A-209ENST00000496445 SSTP61278 116 aa9.38□□□□□ -0.91
VTI1A-209ENST00000496445 MPV17L2Q567V2 206 aa9.38□□□□□ -0.91
VTI1A-209ENST00000496445 ATRAIDQ6UW56 229 aa9.38□□□□□ -0.91
VTI1A-209ENST00000496445 RMI2Q96E14 147 aa9.38□□□□□ -0.91
VTI1A-209ENST00000496445 LRP1Q07954 4544 aaKnown RBP9.37□□□□□ -0.91
VTI1A-209ENST00000496445 TRBV20OR9-2A0A075B6H5 130 aa9.37□□□□□ -0.91
VTI1A-209ENST00000496445 C19orf71A6NCJ1 209 aa9.37□□□□□ -0.91
VTI1A-209ENST00000496445 RBFOX3A6NFN3 312 aa9.37□□□□□ -0.91
VTI1A-209ENST00000496445 IGLC6P0CF74 106 aa9.37□□□□□ -0.91
VTI1A-209ENST00000496445 TCTE3Q8IZS6 198 aa9.37□□□□□ -0.91
VTI1A-209ENST00000496445 AP1S3Q96PC3 154 aa9.37□□□□□ -0.91
VTI1A-209ENST00000496445 RAB19A4D1S5 217 aa9.36□□□□□ -0.91
VTI1A-209ENST00000496445 MEF2BQ02080 365 aaPredicted RBP9.36□□□□□ -0.91
VTI1A-209ENST00000496445 ELOBQ15370 118 aa9.36□□□□□ -0.91
VTI1A-209ENST00000496445 LINC01620Q4KN68 170 aa9.36□□□□□ -0.91
VTI1A-209ENST00000496445 KCNIP4Q6PIL6 250 aa9.36□□□□□ -0.91
VTI1A-209ENST00000496445 ENHOQ6UWT2 76 aa9.36□□□□□ -0.91
VTI1A-209ENST00000496445 NTM-AS1Q6ZSK4 140 aa9.36□□□□□ -0.91
VTI1A-209ENST00000496445 VAX2Q9UIW0 290 aa9.36□□□□□ -0.91
VTI1A-209ENST00000496445 F5H697 171 aa9.35□□□□□ -0.91
VTI1A-209ENST00000496445 FAM229AH3BQW9 127 aa9.35□□□□□ -0.91
VTI1A-209ENST00000496445 GNG4P50150 75 aa9.35□□□□□ -0.91
VTI1A-209ENST00000496445 EIF5AL1Q6IS14 154 aaKnown RBP9.35□□□□□ -0.91
VTI1A-209ENST00000496445 FER1L6-AS1Q8NA97 138 aa9.35□□□□□ -0.91
VTI1A-209ENST00000496445 TPPP3Q9BW30 176 aa9.35□□□□□ -0.91
VTI1A-209ENST00000496445 TMEM262E9PQX1 116 aa9.34□□□□□ -0.91
VTI1A-209ENST00000496445 SMIM17P0DL12 118 aa9.34□□□□□ -0.91
VTI1A-209ENST00000496445 BCL2P10415 239 aa9.34□□□□□ -0.91
VTI1A-209ENST00000496445 Q0VG73 95 aa9.34□□□□□ -0.91
VTI1A-209ENST00000496445 C15orf54Q8N8G6 183 aa9.34□□□□□ -0.91
VTI1A-209ENST00000496445 Q8N976 141 aa9.34□□□□□ -0.91
VTI1A-209ENST00000496445 OR2D3Q8NGH3 330 aa9.34□□□□□ -0.91
VTI1A-209ENST00000496445 SMIM12Q96EX1 92 aa9.34□□□□□ -0.91
VTI1A-209ENST00000496445 TEX46H3BTG2 121 aa9.33□□□□□ -0.92
VTI1A-209ENST00000496445 PDE6DO43924 150 aa9.33□□□□□ -0.92
VTI1A-209ENST00000496445 RPS20P60866 119 aaKnown RBP9.33□□□□□ -0.92
VTI1A-209ENST00000496445 SLC51BQ86UW2 128 aa9.33□□□□□ -0.92
VTI1A-209ENST00000496445 DAZAP1Q96EP5 407 aaKnown RBP9.33□□□□□ -0.92
VTI1A-209ENST00000496445 CHCHD5Q9BSY4 110 aa9.33□□□□□ -0.92
VTI1A-209ENST00000496445 M0QY20 66 aa9.32□□□□□ -0.92
VTI1A-209ENST00000496445 IFNA1P01562 189 aa9.32□□□□□ -0.92
VTI1A-209ENST00000496445 CRPP02741 224 aa9.32□□□□□ -0.92
VTI1A-209ENST00000496445 ANGP03950 147 aaKnown RBP9.32□□□□□ -0.92
VTI1A-209ENST00000496445 MGPP08493 103 aa9.32□□□□□ -0.92
VTI1A-209ENST00000496445 SUMO4Q6EEV6 95 aa9.32□□□□□ -0.92
VTI1A-209ENST00000496445 C1orf43Q9BWL3 253 aa9.32□□□□□ -0.92
VTI1A-209ENST00000496445 MED9Q9NWA0 146 aa9.32□□□□□ -0.92
VTI1A-209ENST00000496445 P01737 135 aa9.31□□□□□ -0.92
VTI1A-209ENST00000496445 CACNG7P62955 275 aa9.31□□□□□ -0.92
VTI1A-209ENST00000496445 TMEM97Q5BJF2 176 aa9.31□□□□□ -0.92
VTI1A-209ENST00000496445 SCXQ7RTU7 201 aa9.31□□□□□ -0.92
VTI1A-209ENST00000496445 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.31□□□□□ -0.92
VTI1A-209ENST00000496445 PKIAP61925 76 aa9.3□□□□□ -0.92
VTI1A-209ENST00000496445 RBX1P62877 108 aa9.3□□□□□ -0.92
VTI1A-209ENST00000496445 GAGE6Q13070 117 aa9.3□□□□□ -0.92
VTI1A-209ENST00000496445 IQCJQ1A5X6 159 aa9.3□□□□□ -0.92
VTI1A-209ENST00000496445 CLPSL2Q6UWE3 100 aa9.3□□□□□ -0.92
VTI1A-209ENST00000496445 LYZL1Q6UWQ5 148 aa9.3□□□□□ -0.92
VTI1A-209ENST00000496445 Q6ZNX1 250 aa9.3□□□□□ -0.92
VTI1A-209ENST00000496445 PRR34Q9NV39 138 aa9.3□□□□□ -0.92
VTI1A-209ENST00000496445 TRBV25-1A0A075B6N4 114 aa9.29□□□□□ -0.92
VTI1A-209ENST00000496445 CTRLP40313 264 aa9.29□□□□□ -0.92
VTI1A-209ENST00000496445 MIAQ16674 131 aa9.29□□□□□ -0.92
VTI1A-209ENST00000496445 KRTAP26-1Q6PEX3 210 aa9.29□□□□□ -0.92
VTI1A-209ENST00000496445 C9orf62Q8N4C0 152 aa9.29□□□□□ -0.92
VTI1A-209ENST00000496445 NUDT10Q8NFP7 164 aa9.29□□□□□ -0.92
VTI1A-209ENST00000496445 NUDT11Q96G61 164 aa9.29□□□□□ -0.92
VTI1A-209ENST00000496445 XKRY2A2RUG3 117 aa9.28□□□□□ -0.92
VTI1A-209ENST00000496445 USP17L23D6RBM5 183 aa9.28□□□□□ -0.92
VTI1A-209ENST00000496445 F2Z2F3 143 aa9.28□□□□□ -0.92
VTI1A-209ENST00000496445 H7C1H1 209 aa9.28□□□□□ -0.92
VTI1A-209ENST00000496445 K7EN84 100 aa9.28□□□□□ -0.92
VTI1A-209ENST00000496445 HLA-DQA1P01909 254 aa9.28□□□□□ -0.92
VTI1A-209ENST00000496445 NKX2-5P52952 324 aaPredicted RBP9.28□□□□□ -0.92
VTI1A-209ENST00000496445 LINC00269Q8N2A0 174 aa9.28□□□□□ -0.92
VTI1A-209ENST00000496445 RNASE7Q9H1E1 156 aaKnown RBP9.28□□□□□ -0.92
VTI1A-209ENST00000496445 BIN3Q9NQY0 253 aa9.28□□□□□ -0.92
VTI1A-209ENST00000496445 IGHV1-24A0A0C4DH33 117 aa9.27□□□□□ -0.93
VTI1A-209ENST00000496445 TRGC1P0CF51 173 aa9.27□□□□□ -0.93
VTI1A-209ENST00000496445 NTF3P20783 257 aa9.27□□□□□ -0.93
VTI1A-209ENST00000496445 C14orf177Q52M58 125 aa9.27□□□□□ -0.93
VTI1A-209ENST00000496445 RASL11AQ6T310 242 aa9.27□□□□□ -0.93
VTI1A-209ENST00000496445 CHAC1Q9BUX1 264 aa9.27□□□□□ -0.93
VTI1A-209ENST00000496445 CNFNQ9BYD5 112 aa9.27□□□□□ -0.93
VTI1A-209ENST00000496445 DPH3P1Q9H4G8 78 aa9.27□□□□□ -0.93
VTI1A-209ENST00000496445 TAGLN2P37802 199 aaKnown RBP9.26□□□□□ -0.93
VTI1A-209ENST00000496445 AKAP14Q86UN6 197 aa9.26□□□□□ -0.93
VTI1A-209ENST00000496445 C20orf203Q8NBC4 194 aa9.26□□□□□ -0.93
VTI1A-209ENST00000496445 RPP21Q9H633 154 aaKnown RBP9.26□□□□□ -0.93
VTI1A-209ENST00000496445 PLA2G1BP04054 148 aaKnown RBP9.25□□□□□ -0.93
VTI1A-209ENST00000496445 PRSS1P07477 247 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 149.1 ms