RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 SREK1IP1Q8N9Q2 155 aaPredicted RBP22.11■■□□□ 1.13
CBX4-203ENST00000494546 IGLV5-52A0A0A0MRZ9 124 aa22.1■■□□□ 1.13
CBX4-203ENST00000494546 NKX2-5P52952 324 aaPredicted RBP22.1■■□□□ 1.13
CBX4-203ENST00000494546 Q8N814 137 aa22.1■■□□□ 1.13
CBX4-203ENST00000494546 NUDT10Q8NFP7 164 aa22.1■■□□□ 1.13
CBX4-203ENST00000494546 NUDT11Q96G61 164 aa22.1■■□□□ 1.13
CBX4-203ENST00000494546 KLK12Q9UKR0 248 aa22.1■■□□□ 1.13
CBX4-203ENST00000494546 TRBV6-8A0A0A6YYG3 113 aa22.09■■□□□ 1.13
CBX4-203ENST00000494546 GCSHP23434 173 aa22.09■■□□□ 1.13
CBX4-203ENST00000494546 Q8N1X5 172 aa22.09■■□□□ 1.13
CBX4-203ENST00000494546 F2Z2F3 143 aa22.08■■□□□ 1.13
CBX4-203ENST00000494546 LYZL1Q6UWQ5 148 aa22.08■■□□□ 1.13
CBX4-203ENST00000494546 A0A1B0GVG6 124 aa22.07■■□□□ 1.12
CBX4-203ENST00000494546 TMEM262E9PQX1 116 aa22.07■■□□□ 1.12
CBX4-203ENST00000494546 OCC1Q8TAD7 63 aa22.07■■□□□ 1.12
CBX4-203ENST00000494546 NTN5Q8WTR8 489 aaPredicted RBP22.07■■□□□ 1.12
CBX4-203ENST00000494546 CHCHD7Q9BUK0 85 aa22.07■■□□□ 1.12
CBX4-203ENST00000494546 DNAJC30Q96LL9 226 aa22.06■■□□□ 1.12
CBX4-203ENST00000494546 K7EN84 100 aa22.05■■□□□ 1.12
CBX4-203ENST00000494546 ELOBQ15370 118 aa22.05■■□□□ 1.12
CBX4-203ENST00000494546 UBE2WQ96B02 151 aa22.05■■□□□ 1.12
CBX4-203ENST00000494546 RMI2Q96E14 147 aa22.05■■□□□ 1.12
CBX4-203ENST00000494546 RNASE7Q9H1E1 156 aaKnown RBP22.05■■□□□ 1.12
CBX4-203ENST00000494546 WFDC2Q14508 124 aa22.04■■□□□ 1.12
CBX4-203ENST00000494546 LYPD6BQ8NI32 183 aa22.04■■□□□ 1.12
CBX4-203ENST00000494546 RPP21Q9H633 154 aaKnown RBP22.04■■□□□ 1.12
CBX4-203ENST00000494546 TMEM250H0YL14 139 aa22.03■■□□□ 1.12
CBX4-203ENST00000494546 LECT2O14960 151 aa22.03■■□□□ 1.12
CBX4-203ENST00000494546 COX11Q9Y6N1 276 aa22.03■■□□□ 1.12
CBX4-203ENST00000494546 IGKV2D-24A0A075B6R9 120 aa22.02■■□□□ 1.12
CBX4-203ENST00000494546 M0QY20 66 aa22.02■■□□□ 1.12
CBX4-203ENST00000494546 TRGC1P0CF51 173 aa22.02■■□□□ 1.12
CBX4-203ENST00000494546 NTF3P20783 257 aa22.02■■□□□ 1.12
CBX4-203ENST00000494546 SUMO4Q6EEV6 95 aa22.02■■□□□ 1.12
CBX4-203ENST00000494546 CHCHD5Q9BSY4 110 aa22.02■■□□□ 1.12
CBX4-203ENST00000494546 H7C1H1 209 aa22.01■■□□□ 1.11
CBX4-203ENST00000494546 CEBPGP53567 150 aa22.01■■□□□ 1.11
CBX4-203ENST00000494546 XGP55808 180 aa22.01■■□□□ 1.11
CBX4-203ENST00000494546 CTRLP40313 264 aa22■■□□□ 1.11
CBX4-203ENST00000494546 TMEM97Q5BJF2 176 aa22■■□□□ 1.11
CBX4-203ENST00000494546 NTM-AS1Q6ZSK4 140 aa21.99■■□□□ 1.11
CBX4-203ENST00000494546 BAALCQ8WXS3 180 aa21.99■■□□□ 1.11
CBX4-203ENST00000494546 MPV17L2Q567V2 206 aa21.98■■□□□ 1.11
CBX4-203ENST00000494546 DPH3P1Q9H4G8 78 aa21.98■■□□□ 1.11
CBX4-203ENST00000494546 ABCA13Q86UQ4 5058 aa21.98■■□□□ 1.11
CBX4-203ENST00000494546 TWIST1Q15672 202 aa21.97■■□□□ 1.11
CBX4-203ENST00000494546 WDR73Q6P4I2 378 aa21.97■■□□□ 1.11
CBX4-203ENST00000494546 C15orf54Q8N8G6 183 aa21.97■■□□□ 1.11
CBX4-203ENST00000494546 EIF5A2Q9GZV4 153 aaKnown RBP21.97■■□□□ 1.11
CBX4-203ENST00000494546 PKIAP61925 76 aa21.95■■□□□ 1.1
CBX4-203ENST00000494546 Q0VG73 95 aa21.95■■□□□ 1.1
CBX4-203ENST00000494546 ANGP03950 147 aaKnown RBP21.94■■□□□ 1.1
CBX4-203ENST00000494546 RASL11AQ6T310 242 aa21.94■■□□□ 1.1
CBX4-203ENST00000494546 IGLV2-33A0A075B6J2 118 aaPredicted RBP21.93■■□□□ 1.1
CBX4-203ENST00000494546 TRBV25-1A0A075B6N4 114 aa21.93■■□□□ 1.1
CBX4-203ENST00000494546 GATCO43716 136 aaKnown RBP21.93■■□□□ 1.1
CBX4-203ENST00000494546 CRPP02741 224 aa21.93■■□□□ 1.1
CBX4-203ENST00000494546 GAGE6Q13070 117 aa21.93■■□□□ 1.1
CBX4-203ENST00000494546 Q8N976 141 aa21.93■■□□□ 1.1
CBX4-203ENST00000494546 CNFNQ9BYD5 112 aa21.93■■□□□ 1.1
CBX4-203ENST00000494546 ATRAIDQ6UW56 229 aa21.92■■□□□ 1.1
CBX4-203ENST00000494546 GTSF1Q8WW33 167 aa21.92■■□□□ 1.1
CBX4-203ENST00000494546 ENHOQ6UWT2 76 aa21.91■■□□□ 1.1
CBX4-203ENST00000494546 IGHV1-24A0A0C4DH33 117 aa21.9■■□□□ 1.1
CBX4-203ENST00000494546 FAM210AQ96ND0 272 aa21.9■■□□□ 1.1
CBX4-203ENST00000494546 C1orf43Q9BWL3 253 aa21.9■■□□□ 1.1
CBX4-203ENST00000494546 EPM2AB3EWF7 344 aa21.89■■□□□ 1.09
CBX4-203ENST00000494546 HAMPP81172 84 aa21.89■■□□□ 1.09
CBX4-203ENST00000494546 IQCJQ1A5X6 159 aa21.89■■□□□ 1.09
CBX4-203ENST00000494546 FAM231DQ6ZW35 169 aa21.89■■□□□ 1.09
CBX4-203ENST00000494546 SMIM7Q9BQ49 75 aa21.89■■□□□ 1.09
CBX4-203ENST00000494546 NIT2Q9NQR4 276 aa21.89■■□□□ 1.09
CBX4-203ENST00000494546 TMEM70Q9BUB7 260 aa21.88■■□□□ 1.09
CBX4-203ENST00000494546 RBX1P62877 108 aa21.87■■□□□ 1.09
CBX4-203ENST00000494546 A8MWL6 223 aa21.86■■□□□ 1.09
CBX4-203ENST00000494546 SMIM15Q7Z3B0 74 aa21.85■■□□□ 1.09
CBX4-203ENST00000494546 DEFB104AQ8WTQ1 72 aa21.85■■□□□ 1.09
CBX4-203ENST00000494546 PGLYRP4Q96LB8 373 aa21.85■■□□□ 1.09
CBX4-203ENST00000494546 CLPSL2Q6UWE3 100 aa21.84■■□□□ 1.09
CBX4-203ENST00000494546 TRAV26-2A0A0B4J265 109 aa21.83■■□□□ 1.09
CBX4-203ENST00000494546 ZNF727A8MUV8 499 aa21.83■■□□□ 1.09
CBX4-203ENST00000494546 NDUFS6O75380 124 aaKnown RBP21.83■■□□□ 1.09
CBX4-203ENST00000494546 SMR3BP02814 79 aaPredicted RBP21.83■■□□□ 1.09
CBX4-203ENST00000494546 SRP19P09132 144 aaKnown RBP21.83■■□□□ 1.09
CBX4-203ENST00000494546 LINC01551Q86U37 167 aa21.83■■□□□ 1.09
CBX4-203ENST00000494546 MIAQ16674 131 aa21.82■■□□□ 1.08
CBX4-203ENST00000494546 LINC00269Q8N2A0 174 aa21.82■■□□□ 1.08
CBX4-203ENST00000494546 GATD1Q8NB37 220 aa21.82■■□□□ 1.08
CBX4-203ENST00000494546 TMEM243Q9BU79 118 aa21.82■■□□□ 1.08
CBX4-203ENST00000494546 FAM30AQ9NZY2 134 aa21.82■■□□□ 1.08
CBX4-203ENST00000494546 FOXA3P55318 350 aaPredicted RBP21.81■■□□□ 1.08
CBX4-203ENST00000494546 FRZBQ92765 325 aa21.81■■□□□ 1.08
CBX4-203ENST00000494546 CT83Q5H943 113 aa21.8■■□□□ 1.08
CBX4-203ENST00000494546 Q5VSD8 79 aa21.79■■□□□ 1.08
CBX4-203ENST00000494546 PRR34Q9NV39 138 aa21.79■■□□□ 1.08
CBX4-203ENST00000494546 HLA-DQA1P01909 254 aa21.78■■□□□ 1.08
CBX4-203ENST00000494546 COTL1Q14019 142 aa21.78■■□□□ 1.08
CBX4-203ENST00000494546 BORCS7Q96B45 105 aa21.78■■□□□ 1.08
CBX4-203ENST00000494546 LINC01620Q4KN68 170 aa21.77■■□□□ 1.08
CBX4-203ENST00000494546 RPL39LQ96EH5 51 aaKnown RBP21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 125.3 ms