RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 BAALCQ8WXS3 180 aa8.31□□□□□ -1.08
HSPG2-212ENST00000493940 IGLV5-52A0A0A0MRZ9 124 aa8.3□□□□□ -1.08
HSPG2-212ENST00000493940 TRBV6-8A0A0A6YYG3 113 aa8.3□□□□□ -1.08
HSPG2-212ENST00000493940 EPM2AB3EWF7 344 aa8.3□□□□□ -1.08
HSPG2-212ENST00000493940 F5H697 171 aa8.3□□□□□ -1.08
HSPG2-212ENST00000493940 PDE6DO43924 150 aa8.3□□□□□ -1.08
HSPG2-212ENST00000493940 LINC01620Q4KN68 170 aa8.3□□□□□ -1.08
HSPG2-212ENST00000493940 LYZL1Q6UWQ5 148 aa8.3□□□□□ -1.08
HSPG2-212ENST00000493940 ENHOQ6UWT2 76 aa8.3□□□□□ -1.08
HSPG2-212ENST00000493940 FER1L6-AS1Q8NA97 138 aa8.3□□□□□ -1.08
HSPG2-212ENST00000493940 DEFB104AQ8WTQ1 72 aa8.3□□□□□ -1.08
HSPG2-212ENST00000493940 TPPP3Q9BW30 176 aa8.3□□□□□ -1.08
HSPG2-212ENST00000493940 RNASE7Q9H1E1 156 aaKnown RBP8.3□□□□□ -1.08
HSPG2-212ENST00000493940 FLG2Q5D862 2391 aaPredicted RBP8.3□□□□□ -1.08
HSPG2-212ENST00000493940 DMBT1Q9UGM3 2413 aaPredicted RBP8.3□□□□□ -1.08
HSPG2-212ENST00000493940 TRAV8-3A0A0A6YYJ7 113 aa8.29□□□□□ -1.08
HSPG2-212ENST00000493940 M0QY20 66 aa8.29□□□□□ -1.08
HSPG2-212ENST00000493940 MPV17L2Q567V2 206 aa8.29□□□□□ -1.08
HSPG2-212ENST00000493940 LYPD6BQ8NI32 183 aa8.29□□□□□ -1.08
HSPG2-212ENST00000493940 MYCBP2O75592 4640 aa8.28□□□□□ -1.08
HSPG2-212ENST00000493940 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.28□□□□□ -1.08
HSPG2-212ENST00000493940 TEX46H3BTG2 121 aa8.28□□□□□ -1.08
HSPG2-212ENST00000493940 NTF3P20783 257 aa8.28□□□□□ -1.08
HSPG2-212ENST00000493940 SUMO4Q6EEV6 95 aa8.28□□□□□ -1.08
HSPG2-212ENST00000493940 Q8N976 141 aa8.28□□□□□ -1.08
HSPG2-212ENST00000493940 NTN5Q8WTR8 489 aaPredicted RBP8.28□□□□□ -1.08
HSPG2-212ENST00000493940 UBE2WQ96B02 151 aa8.28□□□□□ -1.08
HSPG2-212ENST00000493940 DAZAP1Q96EP5 407 aaKnown RBP8.28□□□□□ -1.08
HSPG2-212ENST00000493940 SMIM12Q96EX1 92 aa8.28□□□□□ -1.08
HSPG2-212ENST00000493940 TM2D2Q9BX73 214 aa8.28□□□□□ -1.08
HSPG2-212ENST00000493940 TMEM262E9PQX1 116 aa8.27□□□□□ -1.09
HSPG2-212ENST00000493940 IFNA1P01562 189 aa8.27□□□□□ -1.09
HSPG2-212ENST00000493940 P01737 135 aa8.27□□□□□ -1.09
HSPG2-212ENST00000493940 MGPP08493 103 aa8.27□□□□□ -1.09
HSPG2-212ENST00000493940 INAFM2P0DMQ5 153 aa8.27□□□□□ -1.09
HSPG2-212ENST00000493940 FOXA3P55318 350 aaPredicted RBP8.27□□□□□ -1.09
HSPG2-212ENST00000493940 ATRAIDQ6UW56 229 aa8.27□□□□□ -1.09
HSPG2-212ENST00000493940 IGKV2D-24A0A075B6R9 120 aa8.26□□□□□ -1.09
HSPG2-212ENST00000493940 A0A087WX48 190 aa8.26□□□□□ -1.09
HSPG2-212ENST00000493940 RPS20P60866 119 aaKnown RBP8.26□□□□□ -1.09
HSPG2-212ENST00000493940 KRTAP26-1Q6PEX3 210 aa8.26□□□□□ -1.09
HSPG2-212ENST00000493940 GTSF1Q8WW33 167 aa8.26□□□□□ -1.09
HSPG2-212ENST00000493940 AP1S3Q96PC3 154 aa8.26□□□□□ -1.09
HSPG2-212ENST00000493940 GAGE6Q13070 117 aa8.25□□□□□ -1.09
HSPG2-212ENST00000493940 Q5VSD8 79 aa8.25□□□□□ -1.09
HSPG2-212ENST00000493940 C15orf54Q8N8G6 183 aa8.25□□□□□ -1.09
HSPG2-212ENST00000493940 URGCP-MRPS24S4R325 110 aa8.25□□□□□ -1.09
HSPG2-212ENST00000493940 F2Z2F3 143 aa8.24□□□□□ -1.09
HSPG2-212ENST00000493940 SMIM17P0DL12 118 aa8.24□□□□□ -1.09
HSPG2-212ENST00000493940 CTRLP40313 264 aa8.24□□□□□ -1.09
HSPG2-212ENST00000493940 CACNG7P62955 275 aa8.24□□□□□ -1.09
HSPG2-212ENST00000493940 TOR2AQ5JU69 321 aa8.24□□□□□ -1.09
HSPG2-212ENST00000493940 Q6ZSA8 131 aa8.24□□□□□ -1.09
HSPG2-212ENST00000493940 CHCHD5Q9BSY4 110 aa8.24□□□□□ -1.09
HSPG2-212ENST00000493940 CHCHD7Q9BUK0 85 aa8.24□□□□□ -1.09
HSPG2-212ENST00000493940 GFRA4Q9GZZ7 299 aa8.24□□□□□ -1.09
HSPG2-212ENST00000493940 RPP21Q9H633 154 aaKnown RBP8.24□□□□□ -1.09
HSPG2-212ENST00000493940 TRAV26-2A0A0B4J265 109 aa8.23□□□□□ -1.09
HSPG2-212ENST00000493940 ANGP03950 147 aaKnown RBP8.23□□□□□ -1.09
HSPG2-212ENST00000493940 RBX1P62877 108 aa8.23□□□□□ -1.09
HSPG2-212ENST00000493940 BLOC1S1P78537 153 aa8.23□□□□□ -1.09
HSPG2-212ENST00000493940 CLPSL2Q6UWE3 100 aa8.23□□□□□ -1.09
HSPG2-212ENST00000493940 GATD1Q8NB37 220 aa8.23□□□□□ -1.09
HSPG2-212ENST00000493940 TMEM70Q9BUB7 260 aa8.23□□□□□ -1.09
HSPG2-212ENST00000493940 CNFNQ9BYD5 112 aa8.23□□□□□ -1.09
HSPG2-212ENST00000493940 IGLV4-60A0A075B6I1 120 aa8.22□□□□□ -1.09
HSPG2-212ENST00000493940 GAS8-AS1O95177 125 aa8.22□□□□□ -1.09
HSPG2-212ENST00000493940 IQCJQ1A5X6 159 aa8.22□□□□□ -1.09
HSPG2-212ENST00000493940 WDR73Q6P4I2 378 aa8.22□□□□□ -1.09
HSPG2-212ENST00000493940 RASL11AQ6T310 242 aa8.22□□□□□ -1.09
HSPG2-212ENST00000493940 C20orf203Q8NBC4 194 aa8.22□□□□□ -1.09
HSPG2-212ENST00000493940 DPH3P1Q9H4G8 78 aa8.22□□□□□ -1.09
HSPG2-212ENST00000493940 PRR34Q9NV39 138 aa8.22□□□□□ -1.09
HSPG2-212ENST00000493940 XKRY2A2RUG3 117 aa8.21□□□□□ -1.1
HSPG2-212ENST00000493940 TMEM250H0YL14 139 aa8.21□□□□□ -1.1
HSPG2-212ENST00000493940 TAGLN2P37802 199 aaKnown RBP8.21□□□□□ -1.1
HSPG2-212ENST00000493940 CEBPGP53567 150 aa8.21□□□□□ -1.1
HSPG2-212ENST00000493940 TWIST1Q15672 202 aa8.21□□□□□ -1.1
HSPG2-212ENST00000493940 LINC00269Q8N2A0 174 aa8.21□□□□□ -1.1
HSPG2-212ENST00000493940 RPL39LQ96EH5 51 aaKnown RBP8.21□□□□□ -1.1
HSPG2-212ENST00000493940 NIT2Q9NQR4 276 aa8.21□□□□□ -1.1
HSPG2-212ENST00000493940 BIN3Q9NQY0 253 aa8.21□□□□□ -1.1
HSPG2-212ENST00000493940 TRBV25-1A0A075B6N4 114 aa8.2□□□□□ -1.1
HSPG2-212ENST00000493940 C9JQL5 133 aa8.2□□□□□ -1.1
HSPG2-212ENST00000493940 SRP19P09132 144 aaKnown RBP8.2□□□□□ -1.1
HSPG2-212ENST00000493940 TRGC1P0CF51 173 aa8.2□□□□□ -1.1
HSPG2-212ENST00000493940 Q0VG73 95 aa8.2□□□□□ -1.1
HSPG2-212ENST00000493940 ELOBQ15370 118 aa8.2□□□□□ -1.1
HSPG2-212ENST00000493940 FRZBQ92765 325 aa8.2□□□□□ -1.1
HSPG2-212ENST00000493940 RMI2Q96E14 147 aa8.2□□□□□ -1.1
HSPG2-212ENST00000493940 PGLYRP4Q96LB8 373 aa8.2□□□□□ -1.1
HSPG2-212ENST00000493940 COX11Q9Y6N1 276 aa8.2□□□□□ -1.1
HSPG2-212ENST00000493940 PKHD1L1Q86WI1 4243 aa8.19□□□□□ -1.1
HSPG2-212ENST00000493940 LRP1Q07954 4544 aaKnown RBP8.19□□□□□ -1.1
HSPG2-212ENST00000493940 IGHV1-24A0A0C4DH33 117 aa8.19□□□□□ -1.1
HSPG2-212ENST00000493940 GATCO43716 136 aaKnown RBP8.19□□□□□ -1.1
HSPG2-212ENST00000493940 FAM231DQ6ZW35 169 aa8.19□□□□□ -1.1
HSPG2-212ENST00000493940 FAM210AQ96ND0 272 aa8.19□□□□□ -1.1
HSPG2-212ENST00000493940 C1orf43Q9BWL3 253 aa8.19□□□□□ -1.1
HSPG2-212ENST00000493940 USP17L23D6RBM5 183 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms