RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 STX19Q8N4C7 294 aa0.41□□□□□ -2.34
ITGB1-216ENST00000493758 FAM216BQ8N7L0 139 aa0.41□□□□□ -2.34
ITGB1-216ENST00000493758 NUP35Q8NFH5 326 aa0.41□□□□□ -2.34
ITGB1-216ENST00000493758 OR10AC1Q8NH08 325 aa0.41□□□□□ -2.34
ITGB1-216ENST00000493758 CDC26Q8NHZ8 85 aa0.41□□□□□ -2.34
ITGB1-216ENST00000493758 CCDC94Q9BW85 323 aaPredicted RBP0.41□□□□□ -2.34
ITGB1-216ENST00000493758 WFDC10AQ9H1F0 79 aa0.41□□□□□ -2.34
ITGB1-216ENST00000493758 LAMTOR3Q9UHA4 124 aa0.41□□□□□ -2.34
ITGB1-216ENST00000493758 HSPB8Q9UJY1 196 aa0.41□□□□□ -2.34
ITGB1-216ENST00000493758 PPLO60437 1756 aa0.41□□□□□ -2.34
ITGB1-216ENST00000493758 EIF3AQ14152 1382 aaKnown RBP0.41□□□□□ -2.34
ITGB1-216ENST00000493758 CDK5RAP2Q96SN8 1893 aa0.41□□□□□ -2.34
ITGB1-216ENST00000493758 EML5Q05BV3 1969 aa0.41□□□□□ -2.34
ITGB1-216ENST00000493758 KIAA1549Q9HCM3 1950 aa0.41□□□□□ -2.34
ITGB1-216ENST00000493758 LAMA4Q16363 1823 aa0.41□□□□□ -2.34
ITGB1-216ENST00000493758 FLGP20930 4061 aaPredicted RBP0.4□□□□□ -2.34
ITGB1-216ENST00000493758 GCC2Q8IWJ2 1684 aa0.4□□□□□ -2.34
ITGB1-216ENST00000493758 SNRNP200O75643 2136 aaKnown RBP0.4□□□□□ -2.35
ITGB1-216ENST00000493758 ESPL1Q14674 2120 aa0.4□□□□□ -2.35
ITGB1-216ENST00000493758 MFSD11O43934 449 aa0.4□□□□□ -2.35
ITGB1-216ENST00000493758 PIAS1O75925 651 aa0.4□□□□□ -2.35
ITGB1-216ENST00000493758 CST7O76096 145 aa0.4□□□□□ -2.35
ITGB1-216ENST00000493758 ASIPP42127 132 aa0.4□□□□□ -2.35
ITGB1-216ENST00000493758 RPL35P42766 123 aaKnown RBP0.4□□□□□ -2.35
ITGB1-216ENST00000493758 HBBP68871 147 aa0.4□□□□□ -2.35
ITGB1-216ENST00000493758 MSMO1Q15800 293 aa0.4□□□□□ -2.35
ITGB1-216ENST00000493758 RTL8BQ17RB0 113 aa0.4□□□□□ -2.35
ITGB1-216ENST00000493758 SPATA45Q537H7 98 aa0.4□□□□□ -2.35
ITGB1-216ENST00000493758 SMIM20Q8N5G0 67 aa0.4□□□□□ -2.35
ITGB1-216ENST00000493758 FAM24BQ8N5W8 94 aa0.4□□□□□ -2.35
ITGB1-216ENST00000493758 ZC2HC1AQ96GY0 325 aa0.4□□□□□ -2.35
ITGB1-216ENST00000493758 RTL8AQ9BWD3 113 aa0.4□□□□□ -2.35
ITGB1-216ENST00000493758 OR2H1Q9GZK4 316 aa0.4□□□□□ -2.35
ITGB1-216ENST00000493758 BIN3Q9NQY0 253 aa0.4□□□□□ -2.35
ITGB1-216ENST00000493758 GID8Q9NWU2 228 aa0.4□□□□□ -2.35
ITGB1-216ENST00000493758 MED11Q9P086 117 aa0.4□□□□□ -2.35
ITGB1-216ENST00000493758 NUP98P52948 1817 aa0.4□□□□□ -2.35
ITGB1-216ENST00000493758 DOCK2Q92608 1830 aa0.4□□□□□ -2.35
ITGB1-216ENST00000493758 MYLKQ15746 1914 aa0.4□□□□□ -2.35
ITGB1-216ENST00000493758 SIPA1L3O60292 1781 aaPredicted RBP0.4□□□□□ -2.35
ITGB1-216ENST00000493758 DOCK4Q8N1I0 1966 aa0.39□□□□□ -2.35
ITGB1-216ENST00000493758 MED12Q93074 2177 aa0.39□□□□□ -2.35
ITGB1-216ENST00000493758 SPAARA0A1B0GVQ0 90 aa0.39□□□□□ -2.35
ITGB1-216ENST00000493758 C9orf170A2RU37 121 aa0.39□□□□□ -2.35
ITGB1-216ENST00000493758 E5RI56 91 aa0.39□□□□□ -2.35
ITGB1-216ENST00000493758 C5orf67F2Z3F1 127 aa0.39□□□□□ -2.35
ITGB1-216ENST00000493758 H3BQV1 296 aa0.39□□□□□ -2.35
ITGB1-216ENST00000493758 PFDN1O60925 122 aa0.39□□□□□ -2.35
ITGB1-216ENST00000493758 CSN2P05814 226 aa0.39□□□□□ -2.35
ITGB1-216ENST00000493758 IDO1P14902 403 aa0.39□□□□□ -2.35
ITGB1-216ENST00000493758 FKBP1CQ5VVH2 108 aa0.39□□□□□ -2.35
ITGB1-216ENST00000493758 C3orf33Q6P1S2 294 aa0.39□□□□□ -2.35
ITGB1-216ENST00000493758 LYG2Q86SG7 212 aa0.39□□□□□ -2.35
ITGB1-216ENST00000493758 DYDC1Q8WWB3 177 aa0.39□□□□□ -2.35
ITGB1-216ENST00000493758 PLEKHB2Q96CS7 222 aa0.39□□□□□ -2.35
ITGB1-216ENST00000493758 HEATR1Q9H583 2144 aaKnown RBP0.39□□□□□ -2.35
ITGB1-216ENST00000493758 UFC1Q9Y3C8 167 aa0.39□□□□□ -2.35
ITGB1-216ENST00000493758 F5P12259 2224 aa0.39□□□□□ -2.35
ITGB1-216ENST00000493758 KNTC1P50748 2209 aa0.39□□□□□ -2.35
ITGB1-216ENST00000493758 RFX7Q2KHR2 1363 aa0.39□□□□□ -2.35
ITGB1-216ENST00000493758 CEP162Q5TB80 1403 aa0.38□□□□□ -2.35
ITGB1-216ENST00000493758 NFAT5O94916 1531 aa0.38□□□□□ -2.35
ITGB1-216ENST00000493758 TET1Q8NFU7 2136 aa0.38□□□□□ -2.35
ITGB1-216ENST00000493758 USF3Q68DE3 2245 aa0.38□□□□□ -2.35
ITGB1-216ENST00000493758 TANC1Q9C0D5 1861 aa0.38□□□□□ -2.35
ITGB1-216ENST00000493758 MYO5AQ9Y4I1 1855 aaKnown RBP0.38□□□□□ -2.35
ITGB1-216ENST00000493758 UBR2Q8IWV8 1755 aa0.38□□□□□ -2.35
ITGB1-216ENST00000493758 TMEM238C9JI98 176 aa0.38□□□□□ -2.35
ITGB1-216ENST00000493758 PPP5D1E7EU14 171 aa0.38□□□□□ -2.35
ITGB1-216ENST00000493758 KPNA4O00629 521 aaPredicted RBP0.38□□□□□ -2.35
ITGB1-216ENST00000493758 MT-ND6P03923 174 aa0.38□□□□□ -2.35
ITGB1-216ENST00000493758 SERPINB1P30740 379 aa0.38□□□□□ -2.35
ITGB1-216ENST00000493758 GLRXP35754 106 aa0.38□□□□□ -2.35
ITGB1-216ENST00000493758 LTC4SQ16873 150 aa0.38□□□□□ -2.35
ITGB1-216ENST00000493758 VMA21Q3ZAQ7 101 aa0.38□□□□□ -2.35
ITGB1-216ENST00000493758 TRIQKQ629K1 86 aa0.38□□□□□ -2.35
ITGB1-216ENST00000493758 PHF5AQ7RTV0 110 aaKnown RBP0.38□□□□□ -2.35
ITGB1-216ENST00000493758 ISOC1Q96CN7 298 aa0.38□□□□□ -2.35
ITGB1-216ENST00000493758 BORCS8Q96FH0 119 aa0.38□□□□□ -2.35
ITGB1-216ENST00000493758 MCEEQ96PE7 176 aa0.38□□□□□ -2.35
ITGB1-216ENST00000493758 PRRT1Q99946 306 aa0.38□□□□□ -2.35
ITGB1-216ENST00000493758 HOPXQ9BPY8 73 aaPredicted RBP0.38□□□□□ -2.35
ITGB1-216ENST00000493758 CST11Q9H112 138 aa0.38□□□□□ -2.35
ITGB1-216ENST00000493758 BOLA2Q9H3K6 86 aa0.38□□□□□ -2.35
ITGB1-216ENST00000493758 BOKQ9UMX3 212 aaPredicted RBP0.38□□□□□ -2.35
ITGB1-216ENST00000493758 TPRKBQ9Y3C4 175 aa0.38□□□□□ -2.35
ITGB1-216ENST00000493758 RNF11Q9Y3C5 154 aa0.38□□□□□ -2.35
ITGB1-216ENST00000493758 ASB4Q9Y574 426 aa0.38□□□□□ -2.35
ITGB1-216ENST00000493758 TNCP24821 2201 aa0.38□□□□□ -2.35
ITGB1-216ENST00000493758 PI4KAP42356 2102 aa0.37□□□□□ -2.35
ITGB1-216ENST00000493758 HELZP42694 1942 aaKnown RBP0.37□□□□□ -2.35
ITGB1-216ENST00000493758 ROCK1Q13464 1354 aa0.37□□□□□ -2.35
ITGB1-216ENST00000493758 RTL9Q8NET4 1388 aa0.37□□□□□ -2.35
ITGB1-216ENST00000493758 C5orf58C9J3I9 102 aa0.37□□□□□ -2.35
ITGB1-216ENST00000493758 MRPS36P82909 103 aaKnown RBP0.37□□□□□ -2.35
ITGB1-216ENST00000493758 MIR22HGQ0VDD5 57 aa0.37□□□□□ -2.35
ITGB1-216ENST00000493758 DIAPH2-AS1Q14236 149 aa0.37□□□□□ -2.35
ITGB1-216ENST00000493758 SPINK9Q5DT21 86 aa0.37□□□□□ -2.35
ITGB1-216ENST00000493758 DCUN1D2Q6PH85 259 aa0.37□□□□□ -2.35
ITGB1-216ENST00000493758 SPATA8Q6RVD6 105 aa0.37□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms