RNA–Protein interactions for RNA: ENST00000493468.6

PRPF40A-211, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-211ENST00000493468 FAM162BQ5T6X4 162 aa8.87□□□□□ -0.99
PRPF40A-211ENST00000493468 TRBV6-1A0A0K0K1D8 114 aa8.86□□□□□ -0.99
PRPF40A-211ENST00000493468 MPC2O95563 127 aa8.86□□□□□ -0.99
PRPF40A-211ENST00000493468 CXorf1O96002 111 aa8.86□□□□□ -0.99
PRPF40A-211ENST00000493468 H2BFSP57053 126 aa8.86□□□□□ -0.99
PRPF40A-211ENST00000493468 COX6A2Q02221 97 aa8.86□□□□□ -0.99
PRPF40A-211ENST00000493468 MAJINQ3KP22 176 aa8.86□□□□□ -0.99
PRPF40A-211ENST00000493468 FAT4Q6V0I7 4981 aa8.86□□□□□ -0.99
PRPF40A-211ENST00000493468 STPG4Q8N801 248 aa8.85□□□□□ -0.99
PRPF40A-211ENST00000493468 DERL1Q9BUN8 251 aa8.85□□□□□ -0.99
PRPF40A-211ENST00000493468 CCDC32Q9BV29 185 aa8.85□□□□□ -0.99
PRPF40A-211ENST00000493468 ZFP30Q9Y2G7 519 aa8.85□□□□□ -0.99
PRPF40A-211ENST00000493468 A0A1B0GUV1 79 aa8.84□□□□□ -0.99
PRPF40A-211ENST00000493468 PEX7O00628 323 aa8.84□□□□□ -0.99
PRPF40A-211ENST00000493468 RPS10P46783 165 aaKnown RBP8.84□□□□□ -0.99
PRPF40A-211ENST00000493468 ZNF674Q2M3X9 581 aa8.84□□□□□ -0.99
PRPF40A-211ENST00000493468 MZT2BQ6NZ67 158 aa8.84□□□□□ -0.99
PRPF40A-211ENST00000493468 C15orf56Q8N910 161 aa8.84□□□□□ -0.99
PRPF40A-211ENST00000493468 C20orf203Q8NBC4 194 aa8.84□□□□□ -0.99
PRPF40A-211ENST00000493468 PSMG3Q9BT73 122 aaPredicted RBP8.84□□□□□ -0.99
PRPF40A-211ENST00000493468 IGHV1-24A0A0C4DH33 117 aa8.83□□□□□ -1
PRPF40A-211ENST00000493468 IGKV2-24A0A0C4DH68 120 aa8.83□□□□□ -1
PRPF40A-211ENST00000493468 MUC21A0A0G2JKD1 596 aa8.83□□□□□ -1
PRPF40A-211ENST00000493468 MBP02144 154 aa8.83□□□□□ -1
PRPF40A-211ENST00000493468 CFAP161Q6P656 301 aa8.83□□□□□ -1
PRPF40A-211ENST00000493468 PRSS3P2Q8NHM4 247 aa8.83□□□□□ -1
PRPF40A-211ENST00000493468 HIST1H2BAQ96A08 127 aa8.83□□□□□ -1
PRPF40A-211ENST00000493468 TMSB15BA0A087X1C1 80 aa8.82□□□□□ -1
PRPF40A-211ENST00000493468 A0A0U1RQV1 116 aa8.82□□□□□ -1
PRPF40A-211ENST00000493468 KRTAP9-6A0A140TA67 174 aa8.82□□□□□ -1
PRPF40A-211ENST00000493468 IFNA7P01567 189 aa8.82□□□□□ -1
PRPF40A-211ENST00000493468 CXCL1P09341 107 aa8.82□□□□□ -1
PRPF40A-211ENST00000493468 SERF2P84101 59 aa8.82□□□□□ -1
PRPF40A-211ENST00000493468 Q6ZRP5 223 aa8.82□□□□□ -1
PRPF40A-211ENST00000493468 LYPD6BQ8NI32 183 aa8.82□□□□□ -1
PRPF40A-211ENST00000493468 NKX6-2Q9C056 277 aaPredicted RBP8.82□□□□□ -1
PRPF40A-211ENST00000493468 LINC00474Q9P2X8 69 aa8.82□□□□□ -1
PRPF40A-211ENST00000493468 OR10AG1Q8NH19 301 aa8.81□□□□□ -1
PRPF40A-211ENST00000493468 FMC1Q96HJ9 113 aa8.81□□□□□ -1
PRPF40A-211ENST00000493468 ZNF471Q9BX82 626 aaPredicted RBP8.81□□□□□ -1
PRPF40A-211ENST00000493468 ACTR3CQ9C0K3 210 aaPredicted RBP8.81□□□□□ -1
PRPF40A-211ENST00000493468 IGLV4-60A0A075B6I1 120 aa8.8□□□□□ -1
PRPF40A-211ENST00000493468 AQP10Q96PS8 301 aa8.8□□□□□ -1
PRPF40A-211ENST00000493468 GFRA4Q9GZZ7 299 aa8.8□□□□□ -1
PRPF40A-211ENST00000493468 PKIGQ9Y2B9 76 aa8.8□□□□□ -1
PRPF40A-211ENST00000493468 A0A096LNI7 61 aa8.79□□□□□ -1
PRPF40A-211ENST00000493468 FAM231BA6NCW3 169 aa8.79□□□□□ -1
PRPF40A-211ENST00000493468 F5H697 171 aa8.79□□□□□ -1
PRPF40A-211ENST00000493468 SNAI2O43623 268 aa8.79□□□□□ -1
PRPF40A-211ENST00000493468 ATP6V0CP27449 155 aa8.79□□□□□ -1
PRPF40A-211ENST00000493468 TNFSF18Q9UNG2 199 aa8.79□□□□□ -1
PRPF40A-211ENST00000493468 FAM74A7A6NL05 159 aa8.78□□□□□ -1
PRPF40A-211ENST00000493468 H7C1H1 209 aa8.78□□□□□ -1
PRPF40A-211ENST00000493468 LTAP01374 205 aa8.78□□□□□ -1
PRPF40A-211ENST00000493468 RAB5CP51148 216 aa8.78□□□□□ -1
PRPF40A-211ENST00000493468 UBE2G1P62253 170 aa8.78□□□□□ -1
PRPF40A-211ENST00000493468 TMEM243Q9BU79 118 aa8.78□□□□□ -1
PRPF40A-211ENST00000493468 SSBP4Q9BWG4 385 aaPredicted RBP8.78□□□□□ -1
PRPF40A-211ENST00000493468 GVQW2A0A096LPI5 108 aaPredicted RBP8.77□□□□□ -1.01
PRPF40A-211ENST00000493468 A6NHS1 94 aa8.77□□□□□ -1.01
PRPF40A-211ENST00000493468 OR5AL1P0C617 328 aa8.77□□□□□ -1.01
PRPF40A-211ENST00000493468 UBE2G2P60604 165 aa8.77□□□□□ -1.01
PRPF40A-211ENST00000493468 ZNF664Q8N3J9 261 aa8.77□□□□□ -1.01
PRPF40A-211ENST00000493468 ENKURQ8TC29 256 aa8.77□□□□□ -1.01
PRPF40A-211ENST00000493468 TCEAL7Q9BRU2 100 aa8.77□□□□□ -1.01
PRPF40A-211ENST00000493468 GAGE12HA6NDE8 117 aa8.76□□□□□ -1.01
PRPF40A-211ENST00000493468 SULT1A2P50226 295 aa8.76□□□□□ -1.01
PRPF40A-211ENST00000493468 HIGD2BQ4VC39 106 aa8.76□□□□□ -1.01
PRPF40A-211ENST00000493468 SPANXN1Q5VSR9 72 aa8.76□□□□□ -1.01
PRPF40A-211ENST00000493468 AP1S3Q96PC3 154 aa8.76□□□□□ -1.01
PRPF40A-211ENST00000493468 PSORS1C2Q9UIG4 136 aa8.76□□□□□ -1.01
PRPF40A-211ENST00000493468 SMIM17P0DL12 118 aa8.75□□□□□ -1.01
PRPF40A-211ENST00000493468 PGLYRP4Q96LB8 373 aa8.75□□□□□ -1.01
PRPF40A-211ENST00000493468 CTXND1A0A1B0GTU2 59 aa8.74□□□□□ -1.01
PRPF40A-211ENST00000493468 INMT-MINDY4F8WBC2 141 aa8.74□□□□□ -1.01
PRPF40A-211ENST00000493468 M0QY20 66 aa8.74□□□□□ -1.01
PRPF40A-211ENST00000493468 ZNF726P1Q15940 193 aa8.74□□□□□ -1.01
PRPF40A-211ENST00000493468 INO80EQ8NBZ0 244 aaPredicted RBP8.74□□□□□ -1.01
PRPF40A-211ENST00000493468 MED28Q9H204 178 aa8.74□□□□□ -1.01
PRPF40A-211ENST00000493468 SSNA1O43805 119 aa8.73□□□□□ -1.01
PRPF40A-211ENST00000493468 LCE2AQ5TA79 106 aaPredicted RBP8.73□□□□□ -1.01
PRPF40A-211ENST00000493468 UBE2L6O14933 153 aa8.72□□□□□ -1.01
PRPF40A-211ENST00000493468 FHITP49789 147 aa8.72□□□□□ -1.01
PRPF40A-211ENST00000493468 MARVELD1Q9BSK0 173 aa8.72□□□□□ -1.01
PRPF40A-211ENST00000493468 TRAV26-2A0A0B4J265 109 aa8.71□□□□□ -1.02
PRPF40A-211ENST00000493468 MUC21A0A140T8X8 626 aa8.71□□□□□ -1.02
PRPF40A-211ENST00000493468 CHCHD10Q8WYQ3 142 aaPredicted RBP8.71□□□□□ -1.02
PRPF40A-211ENST00000493468 AKR1C3P42330 323 aa8.7□□□□□ -1.02
PRPF40A-211ENST00000493468 NKX2-5P52952 324 aaPredicted RBP8.7□□□□□ -1.02
PRPF40A-211ENST00000493468 CACNG7P62955 275 aa8.7□□□□□ -1.02
PRPF40A-211ENST00000493468 SUMO4Q6EEV6 95 aa8.7□□□□□ -1.02
PRPF40A-211ENST00000493468 LINC00299Q6ZSB3 139 aa8.7□□□□□ -1.02
PRPF40A-211ENST00000493468 MGPP08493 103 aa8.69□□□□□ -1.02
PRPF40A-211ENST00000493468 RASL11AQ6T310 242 aa8.69□□□□□ -1.02
PRPF40A-211ENST00000493468 CARD19Q96LW7 228 aa8.69□□□□□ -1.02
PRPF40A-211ENST00000493468 MLST8Q9BVC4 326 aa8.69□□□□□ -1.02
PRPF40A-211ENST00000493468 S100A9P06702 114 aaKnown RBP8.68□□□□□ -1.02
PRPF40A-211ENST00000493468 AMTP48728 403 aa8.68□□□□□ -1.02
PRPF40A-211ENST00000493468 FOXI1Q12951 378 aa8.68□□□□□ -1.02
PRPF40A-211ENST00000493468 COTL1Q14019 142 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms