RNA–Protein interactions for RNA: ENST00000492606.1

UBR4-215, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-215ENST00000492606 RD3LP0DJH9 198 aa1.72□□□□□ -2.13
UBR4-215ENST00000492606 NQO2P16083 231 aa1.72□□□□□ -2.13
UBR4-215ENST00000492606 CXCL3P19876 107 aa1.72□□□□□ -2.13
UBR4-215ENST00000492606 OR10J1P30954 320 aa1.72□□□□□ -2.13
UBR4-215ENST00000492606 SLC25A34Q6PIV7 304 aa1.72□□□□□ -2.13
UBR4-215ENST00000492606 SELENOHQ8IZQ5 122 aaKnown RBP1.72□□□□□ -2.13
UBR4-215ENST00000492606 GPR82Q96P67 336 aa1.72□□□□□ -2.13
UBR4-215ENST00000492606 TMEM109Q9BVC6 243 aa1.72□□□□□ -2.13
UBR4-215ENST00000492606 BATF3Q9NR55 127 aa1.72□□□□□ -2.13
UBR4-215ENST00000492606 PRO0461Q9UI25 63 aa1.72□□□□□ -2.13
UBR4-215ENST00000492606 A8MWL6 223 aa1.71□□□□□ -2.14
UBR4-215ENST00000492606 FABP7O15540 132 aa1.71□□□□□ -2.14
UBR4-215ENST00000492606 FAM107AO95990 144 aa1.71□□□□□ -2.14
UBR4-215ENST00000492606 PSMB9P28065 219 aa1.71□□□□□ -2.14
UBR4-215ENST00000492606 HSPA13P48723 471 aa1.71□□□□□ -2.14
UBR4-215ENST00000492606 RAB2AP61019 212 aa1.71□□□□□ -2.14
UBR4-215ENST00000492606 SSX1Q16384 188 aa1.71□□□□□ -2.14
UBR4-215ENST00000492606 Q499Y3 187 aa1.71□□□□□ -2.14
UBR4-215ENST00000492606 FAM104BQ5XKR9 115 aa1.71□□□□□ -2.14
UBR4-215ENST00000492606 PRSS54Q6PEW0 395 aa1.71□□□□□ -2.14
UBR4-215ENST00000492606 AHSA2Q719I0 299 aa1.71□□□□□ -2.14
UBR4-215ENST00000492606 TRMT10CQ7L0Y3 403 aaKnown RBP1.71□□□□□ -2.14
UBR4-215ENST00000492606 Q8NDZ9 215 aa1.71□□□□□ -2.14
UBR4-215ENST00000492606 ORAOV1Q8WV07 137 aa1.71□□□□□ -2.14
UBR4-215ENST00000492606 FMC1Q96HJ9 113 aa1.71□□□□□ -2.14
UBR4-215ENST00000492606 ZNF2Q9BSG1 426 aaPredicted RBP1.71□□□□□ -2.14
UBR4-215ENST00000492606 TMBIM4Q9HC24 238 aa1.71□□□□□ -2.14
UBR4-215ENST00000492606 IFT46Q9NQC8 304 aa1.71□□□□□ -2.14
UBR4-215ENST00000492606 GNG8Q9UK08 70 aa1.71□□□□□ -2.14
UBR4-215ENST00000492606 GVQW2A0A096LPI5 108 aaPredicted RBP1.7□□□□□ -2.14
UBR4-215ENST00000492606 LOC107984640A0A0U1RRK4 108 aa1.7□□□□□ -2.14
UBR4-215ENST00000492606 LOC389332A0A1B0GUA5 103 aa1.7□□□□□ -2.14
UBR4-215ENST00000492606 TRPC5OSA6NMA1 111 aa1.7□□□□□ -2.14
UBR4-215ENST00000492606 M0QXV9 152 aa1.7□□□□□ -2.14
UBR4-215ENST00000492606 SCO1O75880 301 aa1.7□□□□□ -2.14
UBR4-215ENST00000492606 BCL2P10415 239 aa1.7□□□□□ -2.14
UBR4-215ENST00000492606 RNASE4P34096 147 aaKnown RBP1.7□□□□□ -2.14
UBR4-215ENST00000492606 RANBP1P43487 201 aa1.7□□□□□ -2.14
UBR4-215ENST00000492606 VSNL1P62760 191 aa1.7□□□□□ -2.14
UBR4-215ENST00000492606 CD164Q04900 197 aa1.7□□□□□ -2.14
UBR4-215ENST00000492606 BAXQ07812 192 aa1.7□□□□□ -2.14
UBR4-215ENST00000492606 RAB31Q13636 194 aa1.7□□□□□ -2.14
UBR4-215ENST00000492606 PRR9Q5T870 116 aa1.7□□□□□ -2.14
UBR4-215ENST00000492606 IGFL1Q6UW32 110 aa1.7□□□□□ -2.14
UBR4-215ENST00000492606 FAM231DQ6ZW35 169 aa1.7□□□□□ -2.14
UBR4-215ENST00000492606 MAFIPQ8WZ33 124 aa1.7□□□□□ -2.14
UBR4-215ENST00000492606 TVP23CQ96ET8 276 aa1.7□□□□□ -2.14
UBR4-215ENST00000492606 ATP6V1G3Q96LB4 118 aa1.7□□□□□ -2.14
UBR4-215ENST00000492606 CARD19Q96LW7 228 aa1.7□□□□□ -2.14
UBR4-215ENST00000492606 C8orf4Q9NR00 106 aa1.7□□□□□ -2.14
UBR4-215ENST00000492606 RAB22AQ9UL26 194 aa1.7□□□□□ -2.14
UBR4-215ENST00000492606 PKIGQ9Y2B9 76 aa1.7□□□□□ -2.14
UBR4-215ENST00000492606 GYG2O15488 501 aa1.69□□□□□ -2.14
UBR4-215ENST00000492606 SLC25A5P05141 298 aaKnown RBP1.69□□□□□ -2.14
UBR4-215ENST00000492606 INPP1P49441 399 aa1.69□□□□□ -2.14
UBR4-215ENST00000492606 PSMB2P49721 201 aa1.69□□□□□ -2.14
UBR4-215ENST00000492606 GTF2A1P52655 376 aaPredicted RBP1.69□□□□□ -2.14
UBR4-215ENST00000492606 SMIM11AP58511 58 aa1.69□□□□□ -2.14
UBR4-215ENST00000492606 UBE2BP63146 152 aa1.69□□□□□ -2.14
UBR4-215ENST00000492606 DNLZQ5SXM8 178 aa1.69□□□□□ -2.14
UBR4-215ENST00000492606 CFAP126Q5VTH2 177 aa1.69□□□□□ -2.14
UBR4-215ENST00000492606 KRTAP5-2Q701N4 177 aa1.69□□□□□ -2.14
UBR4-215ENST00000492606 BPIFB6Q8NFQ5 453 aa1.69□□□□□ -2.14
UBR4-215ENST00000492606 LHFPL5Q8TAF8 219 aa1.69□□□□□ -2.14
UBR4-215ENST00000492606 TEX47Q8TBZ9 253 aa1.69□□□□□ -2.14
UBR4-215ENST00000492606 ARHGAP5-AS1Q96IT6 56 aa1.69□□□□□ -2.14
UBR4-215ENST00000492606 PGLYRP3Q96LB9 341 aa1.69□□□□□ -2.14
UBR4-215ENST00000492606 SLC39A9Q9NUM3 307 aa1.69□□□□□ -2.14
UBR4-215ENST00000492606 ZNF706Q9Y5V0 76 aaPredicted RBP1.69□□□□□ -2.14
UBR4-215ENST00000492606 RBAKDNA6NC62 111 aa1.68□□□□□ -2.14
UBR4-215ENST00000492606 CRYM-AS1A6NIL9 109 aa1.68□□□□□ -2.14
UBR4-215ENST00000492606 M0R129 80 aa1.68□□□□□ -2.14
UBR4-215ENST00000492606 FGF6P10767 208 aa1.68□□□□□ -2.14
UBR4-215ENST00000492606 RBX1P62877 108 aa1.68□□□□□ -2.14
UBR4-215ENST00000492606 GNGT1P63211 74 aa1.68□□□□□ -2.14
UBR4-215ENST00000492606 MAPRE2Q15555 327 aa1.68□□□□□ -2.14
UBR4-215ENST00000492606 TRAM1Q15629 374 aa1.68□□□□□ -2.14
UBR4-215ENST00000492606 BSXQ3C1V8 233 aa1.68□□□□□ -2.14
UBR4-215ENST00000492606 IDNKQ5T6J7 187 aa1.68□□□□□ -2.14
UBR4-215ENST00000492606 Q5VV11 94 aa1.68□□□□□ -2.14
UBR4-215ENST00000492606 FA2HQ7L5A8 372 aa1.68□□□□□ -2.14
UBR4-215ENST00000492606 FAM19A5Q7Z5A7 132 aaPredicted RBP1.68□□□□□ -2.14
UBR4-215ENST00000492606 CCDC124Q96CT7 223 aaKnown RBP1.68□□□□□ -2.14
UBR4-215ENST00000492606 FXYD5Q96DB9 178 aa1.68□□□□□ -2.14
UBR4-215ENST00000492606 ODF3Q96PU9 254 aa1.68□□□□□ -2.14
UBR4-215ENST00000492606 GINS4Q9BRT9 223 aa1.68□□□□□ -2.14
UBR4-215ENST00000492606 VCX3BQ9H321 246 aa1.68□□□□□ -2.14
UBR4-215ENST00000492606 SAR1AQ9NR31 198 aa1.68□□□□□ -2.14
UBR4-215ENST00000492606 FGFR1OP2Q9NVK5 253 aa1.68□□□□□ -2.14
UBR4-215ENST00000492606 NKIRAS1Q9NYS0 192 aa1.68□□□□□ -2.14
UBR4-215ENST00000492606 PRNDQ9UKY0 176 aa1.68□□□□□ -2.14
UBR4-215ENST00000492606 TMEM56-RWDD3S4R434 201 aa1.68□□□□□ -2.14
UBR4-215ENST00000492606 C8orf87E5RJ46 101 aa1.67□□□□□ -2.14
UBR4-215ENST00000492606 SMLR1H3BR10 107 aa1.67□□□□□ -2.14
UBR4-215ENST00000492606 GPR31O00270 319 aa1.67□□□□□ -2.14
UBR4-215ENST00000492606 TCAPO15273 167 aa1.67□□□□□ -2.14
UBR4-215ENST00000492606 SPINK1P00995 79 aa1.67□□□□□ -2.14
UBR4-215ENST00000492606 GZMBP10144 247 aa1.67□□□□□ -2.14
UBR4-215ENST00000492606 NFYAP23511 347 aaPredicted RBP1.67□□□□□ -2.14
UBR4-215ENST00000492606 G6PCP35575 357 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms