RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 OCC1Q8TAD7 63 aa6.49□□□□□ -1.37
TMEM39A-210ENST00000490099 SFRP2Q96HF1 295 aa6.49□□□□□ -1.37
TMEM39A-210ENST00000490099 H3BVH4 76 aa6.48□□□□□ -1.37
TMEM39A-210ENST00000490099 RHODO00212 210 aa6.48□□□□□ -1.37
TMEM39A-210ENST00000490099 IGLV2-8P01709 118 aa6.48□□□□□ -1.37
TMEM39A-210ENST00000490099 MT-ND4LP03901 98 aa6.48□□□□□ -1.37
TMEM39A-210ENST00000490099 OR10J3Q5JRS4 329 aa6.48□□□□□ -1.37
TMEM39A-210ENST00000490099 PRR27Q6MZM9 219 aa6.48□□□□□ -1.37
TMEM39A-210ENST00000490099 FAM231DQ6ZW35 169 aa6.48□□□□□ -1.37
TMEM39A-210ENST00000490099 C14orf178Q8N769 122 aaPredicted RBP6.48□□□□□ -1.37
TMEM39A-210ENST00000490099 NTN5Q8WTR8 489 aaPredicted RBP6.48□□□□□ -1.37
TMEM39A-210ENST00000490099 ISOC2Q96AB3 205 aa6.48□□□□□ -1.37
TMEM39A-210ENST00000490099 A0A087WWC5 75 aa6.47□□□□□ -1.37
TMEM39A-210ENST00000490099 XKRY2A2RUG3 117 aa6.47□□□□□ -1.37
TMEM39A-210ENST00000490099 K7EN84 100 aa6.47□□□□□ -1.37
TMEM39A-210ENST00000490099 P01737 135 aa6.47□□□□□ -1.37
TMEM39A-210ENST00000490099 CXCL1P09341 107 aa6.47□□□□□ -1.37
TMEM39A-210ENST00000490099 SYT8Q8NBV8 401 aa6.47□□□□□ -1.37
TMEM39A-210ENST00000490099 CLRN3Q8NCR9 226 aa6.47□□□□□ -1.37
TMEM39A-210ENST00000490099 ANAPC16Q96DE5 110 aa6.47□□□□□ -1.37
TMEM39A-210ENST00000490099 OSTCQ9NRP0 149 aa6.47□□□□□ -1.37
TMEM39A-210ENST00000490099 TRBV10-1A0A0K0K1A3 114 aa6.46□□□□□ -1.38
TMEM39A-210ENST00000490099 GRIFINA4D1Z8 144 aa6.46□□□□□ -1.38
TMEM39A-210ENST00000490099 GAGE12JA6NER3 117 aa6.46□□□□□ -1.38
TMEM39A-210ENST00000490099 GCSHP23434 173 aa6.46□□□□□ -1.38
TMEM39A-210ENST00000490099 RPS20P60866 119 aaKnown RBP6.46□□□□□ -1.38
TMEM39A-210ENST00000490099 GAGE1Q13065 139 aa6.46□□□□□ -1.38
TMEM39A-210ENST00000490099 GAGE4Q13068 117 aa6.46□□□□□ -1.38
TMEM39A-210ENST00000490099 GAGE5Q13069 117 aa6.46□□□□□ -1.38
TMEM39A-210ENST00000490099 GAGE13Q4V321 117 aa6.46□□□□□ -1.38
TMEM39A-210ENST00000490099 Q8N814 137 aa6.46□□□□□ -1.38
TMEM39A-210ENST00000490099 OR10G8Q8NGN5 311 aa6.46□□□□□ -1.38
TMEM39A-210ENST00000490099 CTDSP1Q9GZU7 261 aa6.46□□□□□ -1.38
TMEM39A-210ENST00000490099 FAT1Q14517 4588 aa6.45□□□□□ -1.38
TMEM39A-210ENST00000490099 TRAV8-3A0A0A6YYJ7 113 aa6.45□□□□□ -1.38
TMEM39A-210ENST00000490099 C19orf71A6NCJ1 209 aa6.45□□□□□ -1.38
TMEM39A-210ENST00000490099 GATCO43716 136 aaKnown RBP6.45□□□□□ -1.38
TMEM39A-210ENST00000490099 IGHV3-30P01768 117 aa6.45□□□□□ -1.38
TMEM39A-210ENST00000490099 IGHV3-33P01772 117 aa6.45□□□□□ -1.38
TMEM39A-210ENST00000490099 IGHV3-30-3P0DP02 117 aa6.45□□□□□ -1.38
TMEM39A-210ENST00000490099 IGHV3-30-5P0DP03 117 aa6.45□□□□□ -1.38
TMEM39A-210ENST00000490099 ANKRD39Q53RE8 183 aa6.45□□□□□ -1.38
TMEM39A-210ENST00000490099 CT83Q5H943 113 aa6.45□□□□□ -1.38
TMEM39A-210ENST00000490099 ZFP82Q8N141 532 aa6.45□□□□□ -1.38
TMEM39A-210ENST00000490099 TM2D2Q9BX73 214 aa6.45□□□□□ -1.38
TMEM39A-210ENST00000490099 RPP21Q9H633 154 aaKnown RBP6.45□□□□□ -1.38
TMEM39A-210ENST00000490099 RPS10P5Q9NQ39 176 aa6.45□□□□□ -1.38
TMEM39A-210ENST00000490099 TMEM242Q9NWH2 141 aa6.45□□□□□ -1.38
TMEM39A-210ENST00000490099 PHLDA3Q9Y5J5 127 aa6.45□□□□□ -1.38
TMEM39A-210ENST00000490099 C7orf77A4D0Y5 90 aa6.44□□□□□ -1.38
TMEM39A-210ENST00000490099 A8MWL6 223 aa6.44□□□□□ -1.38
TMEM39A-210ENST00000490099 EPM2AB3EWF7 344 aa6.44□□□□□ -1.38
TMEM39A-210ENST00000490099 SNAI2O43623 268 aa6.44□□□□□ -1.38
TMEM39A-210ENST00000490099 OR5AL1P0C617 328 aa6.44□□□□□ -1.38
TMEM39A-210ENST00000490099 UBE2D3P61077 147 aa6.44□□□□□ -1.38
TMEM39A-210ENST00000490099 UBE2D2P62837 147 aa6.44□□□□□ -1.38
TMEM39A-210ENST00000490099 DAZ4Q86SG3 579 aaKnown RBP6.44□□□□□ -1.38
TMEM39A-210ENST00000490099 NIT1Q86X76 327 aa6.44□□□□□ -1.38
TMEM39A-210ENST00000490099 NUDT10Q8NFP7 164 aa6.44□□□□□ -1.38
TMEM39A-210ENST00000490099 OR2D3Q8NGH3 330 aa6.44□□□□□ -1.38
TMEM39A-210ENST00000490099 NUDT11Q96G61 164 aa6.44□□□□□ -1.38
TMEM39A-210ENST00000490099 TMEM70Q9BUB7 260 aa6.44□□□□□ -1.38
TMEM39A-210ENST00000490099 RNASE7Q9H1E1 156 aaKnown RBP6.44□□□□□ -1.38
TMEM39A-210ENST00000490099 DAZ3Q9NR90 486 aaKnown RBP6.44□□□□□ -1.38
TMEM39A-210ENST00000490099 KIF25-AS1Q9Y6Z4 181 aa6.44□□□□□ -1.38
TMEM39A-210ENST00000490099 TRBV7-3A0A075B6L6 115 aa6.43□□□□□ -1.38
TMEM39A-210ENST00000490099 A0A087WWL8 130 aa6.43□□□□□ -1.38
TMEM39A-210ENST00000490099 TMSB15BA0A087X1C1 80 aa6.43□□□□□ -1.38
TMEM39A-210ENST00000490099 FAM231BA6NCW3 169 aa6.43□□□□□ -1.38
TMEM39A-210ENST00000490099 M0R381 172 aa6.43□□□□□ -1.38
TMEM39A-210ENST00000490099 PSCAO43653 123 aa6.43□□□□□ -1.38
TMEM39A-210ENST00000490099 S100PP25815 95 aa6.43□□□□□ -1.38
TMEM39A-210ENST00000490099 RAB4BP61018 213 aa6.43□□□□□ -1.38
TMEM39A-210ENST00000490099 RPL19P84098 196 aaKnown RBP6.43□□□□□ -1.38
TMEM39A-210ENST00000490099 WFDC2Q14508 124 aa6.43□□□□□ -1.38
TMEM39A-210ENST00000490099 KCNIP4Q6PIL6 250 aa6.43□□□□□ -1.38
TMEM39A-210ENST00000490099 ATRAIDQ6UW56 229 aa6.43□□□□□ -1.38
TMEM39A-210ENST00000490099 IMMP2LQ96T52 175 aa6.43□□□□□ -1.38
TMEM39A-210ENST00000490099 GFRA4Q9GZZ7 299 aa6.43□□□□□ -1.38
TMEM39A-210ENST00000490099 Q9HAA7 133 aa6.43□□□□□ -1.38
TMEM39A-210ENST00000490099 IGLV5-52A0A0A0MRZ9 124 aa6.42□□□□□ -1.38
TMEM39A-210ENST00000490099 FAM74A4Q5TZK3 123 aa6.42□□□□□ -1.38
TMEM39A-210ENST00000490099 Q6ZSA8 131 aa6.42□□□□□ -1.38
TMEM39A-210ENST00000490099 OR10AG1Q8NH19 301 aa6.42□□□□□ -1.38
TMEM39A-210ENST00000490099 TSKUQ8WUA8 353 aa6.42□□□□□ -1.38
TMEM39A-210ENST00000490099 BTF3L4Q96K17 158 aa6.42□□□□□ -1.38
TMEM39A-210ENST00000490099 CHCHD7Q9BUK0 85 aa6.42□□□□□ -1.38
TMEM39A-210ENST00000490099 V9GYV3 84 aa6.42□□□□□ -1.38
TMEM39A-210ENST00000490099 TRAV9-1A0A075B6T8 112 aa6.41□□□□□ -1.38
TMEM39A-210ENST00000490099 RPL36AP83881 106 aaKnown RBP6.41□□□□□ -1.38
TMEM39A-210ENST00000490099 RPL36ALQ969Q0 106 aaKnown RBP6.41□□□□□ -1.38
TMEM39A-210ENST00000490099 BORCS7Q96B45 105 aa6.41□□□□□ -1.38
TMEM39A-210ENST00000490099 SMCO4Q9NRQ5 59 aa6.41□□□□□ -1.38
TMEM39A-210ENST00000490099 FAM30AQ9NZY2 134 aa6.41□□□□□ -1.38
TMEM39A-210ENST00000490099 NAT8BQ9UHF3 227 aa6.41□□□□□ -1.38
TMEM39A-210ENST00000490099 COX11Q9Y6N1 276 aa6.41□□□□□ -1.38
TMEM39A-210ENST00000490099 SRRM2Q9UQ35 2752 aaKnown RBP6.4□□□□□ -1.38
TMEM39A-210ENST00000490099 TRBV6-8A0A0A6YYG3 113 aa6.4□□□□□ -1.38
TMEM39A-210ENST00000490099 SMIM27A0A1W2PRY6 76 aa6.4□□□□□ -1.38
TMEM39A-210ENST00000490099 F2Z2F3 143 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms