RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 ERCC8Q13216 396 aa2.37□□□□□ -2.03
ECHDC1-217ENST00000488087 ZNF56Q15929 161 aa2.37□□□□□ -2.03
ECHDC1-217ENST00000488087 C4orf26Q17RF5 130 aa2.37□□□□□ -2.03
ECHDC1-217ENST00000488087 MRPL51Q4U2R6 128 aaKnown RBP2.37□□□□□ -2.03
ECHDC1-217ENST00000488087 C10orf113Q5VZT2 155 aa2.37□□□□□ -2.03
ECHDC1-217ENST00000488087 HRCT1Q6UXD1 115 aa2.37□□□□□ -2.03
ECHDC1-217ENST00000488087 SERP2Q8N6R1 65 aa2.37□□□□□ -2.03
ECHDC1-217ENST00000488087 DAND5Q8N907 189 aa2.37□□□□□ -2.03
ECHDC1-217ENST00000488087 METTL26Q96S19 204 aa2.37□□□□□ -2.03
ECHDC1-217ENST00000488087 FGF23Q9GZV9 251 aaPredicted RBP2.37□□□□□ -2.03
ECHDC1-217ENST00000488087 DYNLRB1Q9NP97 96 aa2.37□□□□□ -2.03
ECHDC1-217ENST00000488087 MRPL35Q9NZE8 188 aaKnown RBP2.37□□□□□ -2.03
ECHDC1-217ENST00000488087 LAMTOR3Q9UHA4 124 aa2.37□□□□□ -2.03
ECHDC1-217ENST00000488087 SERP1Q9Y6X1 66 aa2.37□□□□□ -2.03
ECHDC1-217ENST00000488087 MED12LQ86YW9 2145 aa2.36□□□□□ -2.03
ECHDC1-217ENST00000488087 IGKV2-28A0A075B6P5 120 aa2.36□□□□□ -2.03
ECHDC1-217ENST00000488087 SMIM26A0A096LP01 95 aa2.36□□□□□ -2.03
ECHDC1-217ENST00000488087 IGHV1-45A0A0A0MS14 117 aa2.36□□□□□ -2.03
ECHDC1-217ENST00000488087 TRAV40A0A0B4J280 105 aa2.36□□□□□ -2.03
ECHDC1-217ENST00000488087 H3BVH4 76 aa2.36□□□□□ -2.03
ECHDC1-217ENST00000488087 M0R1B8 84 aa2.36□□□□□ -2.03
ECHDC1-217ENST00000488087 COX7A2P2O60397 106 aa2.36□□□□□ -2.03
ECHDC1-217ENST00000488087 IGKV2D-28P01615 120 aa2.36□□□□□ -2.03
ECHDC1-217ENST00000488087 PYYP10082 97 aa2.36□□□□□ -2.03
ECHDC1-217ENST00000488087 CD24P25063 80 aa2.36□□□□□ -2.03
ECHDC1-217ENST00000488087 PFN2P35080 140 aa2.36□□□□□ -2.03
ECHDC1-217ENST00000488087 TMEM155Q4W5P6 130 aa2.36□□□□□ -2.03
ECHDC1-217ENST00000488087 C1orf195Q5TG92 126 aa2.36□□□□□ -2.03
ECHDC1-217ENST00000488087 HES3Q5TGS1 186 aa2.36□□□□□ -2.03
ECHDC1-217ENST00000488087 PATE2Q6UY27 113 aa2.36□□□□□ -2.03
ECHDC1-217ENST00000488087 ZCCHC24Q8N2G6 241 aaKnown RBP2.36□□□□□ -2.03
ECHDC1-217ENST00000488087 TMEM263Q8WUH6 116 aaKnown RBP2.36□□□□□ -2.03
ECHDC1-217ENST00000488087 LINC00477Q96M19 166 aa2.36□□□□□ -2.03
ECHDC1-217ENST00000488087 TTTY13Q9BZ97 58 aa2.36□□□□□ -2.03
ECHDC1-217ENST00000488087 DPH3P1Q9H4G8 78 aa2.36□□□□□ -2.03
ECHDC1-217ENST00000488087 LINC00527Q9UJ94 153 aa2.36□□□□□ -2.03
ECHDC1-217ENST00000488087 MPDZO75970 2070 aa2.36□□□□□ -2.03
ECHDC1-217ENST00000488087 TRGV5A0A0B4J1U4 118 aa2.35□□□□□ -2.03
ECHDC1-217ENST00000488087 IGHV1-69DA0A0B4J2H0 117 aa2.35□□□□□ -2.03
ECHDC1-217ENST00000488087 IGHV5-51A0A0C4DH38 117 aa2.35□□□□□ -2.03
ECHDC1-217ENST00000488087 TEX49A0A1B0GTD5 131 aa2.35□□□□□ -2.03
ECHDC1-217ENST00000488087 LOC389332A0A1B0GUA5 103 aa2.35□□□□□ -2.03
ECHDC1-217ENST00000488087 TMEM223A0PJW6 202 aa2.35□□□□□ -2.03
ECHDC1-217ENST00000488087 SDHAF1A6NFY7 115 aa2.35□□□□□ -2.03
ECHDC1-217ENST00000488087 ZNF815PA8K554 130 aa2.35□□□□□ -2.03
ECHDC1-217ENST00000488087 LST1O00453 97 aa2.35□□□□□ -2.03
ECHDC1-217ENST00000488087 CCL16O15467 120 aa2.35□□□□□ -2.03
ECHDC1-217ENST00000488087 IGHG2P01859 326 aa2.35□□□□□ -2.03
ECHDC1-217ENST00000488087 RNASE2P10153 161 aaKnown RBP2.35□□□□□ -2.03
ECHDC1-217ENST00000488087 LINC00315P59091 139 aa2.35□□□□□ -2.03
ECHDC1-217ENST00000488087 NPC2P61916 151 aa2.35□□□□□ -2.03
ECHDC1-217ENST00000488087 CD164Q04900 197 aa2.35□□□□□ -2.03
ECHDC1-217ENST00000488087 PLGLAQ15195 96 aa2.35□□□□□ -2.03
ECHDC1-217ENST00000488087 DEFB116Q30KQ4 102 aa2.35□□□□□ -2.03
ECHDC1-217ENST00000488087 ORMDL2Q53FV1 153 aa2.35□□□□□ -2.03
ECHDC1-217ENST00000488087 FAM201AQ5SY85 155 aa2.35□□□□□ -2.03
ECHDC1-217ENST00000488087 FAM222AQ5U5X8 452 aa2.35□□□□□ -2.03
ECHDC1-217ENST00000488087 GUSBP11Q6P575 273 aa2.35□□□□□ -2.03
ECHDC1-217ENST00000488087 CEMP1Q6PRD7 247 aaPredicted RBP2.35□□□□□ -2.03
ECHDC1-217ENST00000488087 C2orf82Q6UX34 121 aa2.35□□□□□ -2.03
ECHDC1-217ENST00000488087 MDP1Q86V88 176 aa2.35□□□□□ -2.03
ECHDC1-217ENST00000488087 DCANP1Q8TF63 244 aa2.35□□□□□ -2.03
ECHDC1-217ENST00000488087 C16orf95Q9H693 158 aa2.35□□□□□ -2.03
ECHDC1-217ENST00000488087 KLK5Q9Y337 293 aaPredicted RBP2.35□□□□□ -2.03
ECHDC1-217ENST00000488087 SPTBP11277 2137 aa2.35□□□□□ -2.03
ECHDC1-217ENST00000488087 CEP192Q8TEP8 1941 aa2.34□□□□□ -2.03
ECHDC1-217ENST00000488087 PCDH15Q96QU1 1955 aa2.34□□□□□ -2.03
ECHDC1-217ENST00000488087 KIAA1549Q9HCM3 1950 aa2.34□□□□□ -2.03
ECHDC1-217ENST00000488087 IGKV1D-37A0A075B6S9 117 aa2.34□□□□□ -2.03
ECHDC1-217ENST00000488087 TMSB15BA0A087X1C1 80 aa2.34□□□□□ -2.03
ECHDC1-217ENST00000488087 A0A0J9YW62 118 aa2.34□□□□□ -2.03
ECHDC1-217ENST00000488087 hADV29S1A0JD25 119 aa2.34□□□□□ -2.03
ECHDC1-217ENST00000488087 C11orf86A6NJI1 115 aa2.34□□□□□ -2.03
ECHDC1-217ENST00000488087 C10orf142B7Z368 130 aa2.34□□□□□ -2.03
ECHDC1-217ENST00000488087 COX6CP09669 75 aa2.34□□□□□ -2.03
ECHDC1-217ENST00000488087 CRIP1P50238 77 aa2.34□□□□□ -2.03
ECHDC1-217ENST00000488087 ATP5EP56381 51 aaPredicted RBP2.34□□□□□ -2.03
ECHDC1-217ENST00000488087 PDE6HQ13956 83 aa2.34□□□□□ -2.03
ECHDC1-217ENST00000488087 SPINK9Q5DT21 86 aa2.34□□□□□ -2.03
ECHDC1-217ENST00000488087 Q6JHZ5 121 aa2.34□□□□□ -2.03
ECHDC1-217ENST00000488087 LYZL1Q6UWQ5 148 aa2.34□□□□□ -2.03
ECHDC1-217ENST00000488087 SCGB1D4Q6XE38 83 aa2.34□□□□□ -2.03
ECHDC1-217ENST00000488087 LINC00305Q7Z4B0 112 aa2.34□□□□□ -2.03
ECHDC1-217ENST00000488087 FAM216BQ8N7L0 139 aa2.34□□□□□ -2.03
ECHDC1-217ENST00000488087 TOMM6Q96B49 74 aa2.34□□□□□ -2.03
ECHDC1-217ENST00000488087 CCL26Q9Y258 94 aa2.34□□□□□ -2.03
ECHDC1-217ENST00000488087 TIMM8BQ9Y5J9 83 aaPredicted RBP2.34□□□□□ -2.03
ECHDC1-217ENST00000488087 LRP4O75096 1905 aa2.34□□□□□ -2.04
ECHDC1-217ENST00000488087 CACNA1CQ13936 2221 aa2.34□□□□□ -2.04
ECHDC1-217ENST00000488087 EML6Q6ZMW3 1958 aa2.34□□□□□ -2.04
ECHDC1-217ENST00000488087 PTPRBP23467 1997 aa2.33□□□□□ -2.04
ECHDC1-217ENST00000488087 IGLV1-50A0A075B6I6 118 aa2.33□□□□□ -2.04
ECHDC1-217ENST00000488087 IGLV3-12A0A075B6K2 115 aa2.33□□□□□ -2.04
ECHDC1-217ENST00000488087 TRBV7-1A0A0A6YYK4 115 aa2.33□□□□□ -2.04
ECHDC1-217ENST00000488087 TRAV3A0A0B4J244 114 aa2.33□□□□□ -2.04
ECHDC1-217ENST00000488087 FAM236DA0A1B0GTK5 79 aa2.33□□□□□ -2.04
ECHDC1-217ENST00000488087 M0R381 172 aa2.33□□□□□ -2.04
ECHDC1-217ENST00000488087 PPP1R17O96001 155 aa2.33□□□□□ -2.04
ECHDC1-217ENST00000488087 INAFM2P0DMQ5 153 aa2.33□□□□□ -2.04
ECHDC1-217ENST00000488087 IGHV1-8P0DP01 117 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 134.7 ms