RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 CASZ1Q86V15 1759 aa0.98□□□□□ -2.25
HMGB1P36-201ENST00000487709 TANC2Q9HCD6 1990 aa0.98□□□□□ -2.25
HMGB1P36-201ENST00000487709 MYH1P12882 1939 aa0.98□□□□□ -2.25
HMGB1P36-201ENST00000487709 TRBV30A0A0K0K1B3 111 aa0.98□□□□□ -2.25
HMGB1P36-201ENST00000487709 SNCAP37840 140 aa0.98□□□□□ -2.25
HMGB1P36-201ENST00000487709 GNG2P59768 71 aa0.98□□□□□ -2.25
HMGB1P36-201ENST00000487709 KLKP1Q107X0 134 aa0.98□□□□□ -2.25
HMGB1P36-201ENST00000487709 C10orf128Q5T292 105 aa0.98□□□□□ -2.25
HMGB1P36-201ENST00000487709 LINC00208Q96KT6 92 aa0.98□□□□□ -2.25
HMGB1P36-201ENST00000487709 BCORL1Q5H9F3 1711 aa0.98□□□□□ -2.25
HMGB1P36-201ENST00000487709 ZNF609O15014 1411 aa0.98□□□□□ -2.25
HMGB1P36-201ENST00000487709 CASKIN1Q8WXD9 1431 aa0.98□□□□□ -2.25
HMGB1P36-201ENST00000487709 MED12Q93074 2177 aa0.97□□□□□ -2.25
HMGB1P36-201ENST00000487709 A0A1W2PPM0 123 aa0.97□□□□□ -2.25
HMGB1P36-201ENST00000487709 NAP1L6A6NFF2 107 aa0.97□□□□□ -2.25
HMGB1P36-201ENST00000487709 EFNA4P52798 201 aa0.97□□□□□ -2.25
HMGB1P36-201ENST00000487709 KRTDAPP60985 99 aa0.97□□□□□ -2.25
HMGB1P36-201ENST00000487709 GNG11P61952 73 aa0.97□□□□□ -2.25
HMGB1P36-201ENST00000487709 UBA52P62987 128 aaKnown RBP0.97□□□□□ -2.25
HMGB1P36-201ENST00000487709 KRTAP5-10Q6L8G5 202 aa0.97□□□□□ -2.25
HMGB1P36-201ENST00000487709 DPY30Q9C005 99 aa0.97□□□□□ -2.25
HMGB1P36-201ENST00000487709 Q9H521 79 aa0.97□□□□□ -2.25
HMGB1P36-201ENST00000487709 SCP2D1Q9UJQ7 156 aa0.97□□□□□ -2.25
HMGB1P36-201ENST00000487709 V9GYV3 84 aa0.97□□□□□ -2.25
HMGB1P36-201ENST00000487709 ABCC10Q5T3U5 1492 aa0.97□□□□□ -2.25
HMGB1P36-201ENST00000487709 CTTNBP2Q8WZ74 1663 aa0.97□□□□□ -2.25
HMGB1P36-201ENST00000487709 PPIP5K1Q6PFW1 1433 aa0.97□□□□□ -2.25
HMGB1P36-201ENST00000487709 SCAPERQ9BY12 1400 aa0.97□□□□□ -2.25
HMGB1P36-201ENST00000487709 NSD3Q9BZ95 1437 aa0.97□□□□□ -2.25
HMGB1P36-201ENST00000487709 SIP14410 1827 aa0.96□□□□□ -2.26
HMGB1P36-201ENST00000487709 KIF13AQ9H1H9 1805 aa0.96□□□□□ -2.26
HMGB1P36-201ENST00000487709 RBBP6Q7Z6E9 1792 aaKnown RBP0.96□□□□□ -2.26
HMGB1P36-201ENST00000487709 ARHGAP5Q13017 1502 aa0.96□□□□□ -2.26
HMGB1P36-201ENST00000487709 MPC2O95563 127 aa0.96□□□□□ -2.26
HMGB1P36-201ENST00000487709 EDDM3BP56851 147 aa0.96□□□□□ -2.26
HMGB1P36-201ENST00000487709 ELOF1P60002 83 aaKnown RBP0.96□□□□□ -2.26
HMGB1P36-201ENST00000487709 TMEM14BQ9NUH8 114 aa0.96□□□□□ -2.26
HMGB1P36-201ENST00000487709 ANK1P16157 1881 aa0.96□□□□□ -2.26
HMGB1P36-201ENST00000487709 MUC16Q8WXI7 14507 aa0.95□□□□□ -2.26
HMGB1P36-201ENST00000487709 PLXNA4Q9HCM2 1894 aa0.95□□□□□ -2.26
HMGB1P36-201ENST00000487709 TEX14Q8IWB6 1497 aa0.95□□□□□ -2.26
HMGB1P36-201ENST00000487709 TRBV7-3A0A075B6L6 115 aa0.95□□□□□ -2.26
HMGB1P36-201ENST00000487709 C10orf99Q6UWK7 81 aa0.95□□□□□ -2.26
HMGB1P36-201ENST00000487709 MGST2Q99735 147 aa0.95□□□□□ -2.26
HMGB1P36-201ENST00000487709 SNHG12Q9BXW3 62 aa0.95□□□□□ -2.26
HMGB1P36-201ENST00000487709 ZFC3H1O60293 1989 aaKnown RBP0.95□□□□□ -2.26
HMGB1P36-201ENST00000487709 KIAA1549Q9HCM3 1950 aa0.95□□□□□ -2.26
HMGB1P36-201ENST00000487709 SNRNP200O75643 2136 aaKnown RBP0.95□□□□□ -2.26
HMGB1P36-201ENST00000487709 CEP192Q8TEP8 1941 aa0.95□□□□□ -2.26
HMGB1P36-201ENST00000487709 SCN3AQ9NY46 2000 aa0.94□□□□□ -2.26
HMGB1P36-201ENST00000487709 FYCO1Q9BQS8 1478 aa0.94□□□□□ -2.26
HMGB1P36-201ENST00000487709 PHRF1Q9P1Y6 1649 aaKnown RBP0.94□□□□□ -2.26
HMGB1P36-201ENST00000487709 LAMB1P07942 1786 aa0.94□□□□□ -2.26
HMGB1P36-201ENST00000487709 CLPSL1A2RUU4 121 aa0.94□□□□□ -2.26
HMGB1P36-201ENST00000487709 GNGT2O14610 69 aa0.94□□□□□ -2.26
HMGB1P36-201ENST00000487709 PPP1R17O96001 155 aa0.94□□□□□ -2.26
HMGB1P36-201ENST00000487709 SPINK13Q1W4C9 94 aa0.94□□□□□ -2.26
HMGB1P36-201ENST00000487709 VAMP8Q9BV40 100 aa0.94□□□□□ -2.26
HMGB1P36-201ENST00000487709 DYNLRB1Q9NP97 96 aa0.94□□□□□ -2.26
HMGB1P36-201ENST00000487709 LINC00474Q9P2X8 69 aa0.94□□□□□ -2.26
HMGB1P36-201ENST00000487709 UQCR10Q9UDW1 63 aa0.94□□□□□ -2.26
HMGB1P36-201ENST00000487709 LENEPQ9Y5L5 61 aa0.94□□□□□ -2.26
HMGB1P36-201ENST00000487709 R4GMQ9 66 aa0.94□□□□□ -2.26
HMGB1P36-201ENST00000487709 V9GYS6 101 aa0.94□□□□□ -2.26
HMGB1P36-201ENST00000487709 MUC4Q99102 2169 aa0.94□□□□□ -2.26
HMGB1P36-201ENST00000487709 ZNF142P52746 1687 aaPredicted RBP0.94□□□□□ -2.26
HMGB1P36-201ENST00000487709 TNRC6BQ9UPQ9 1833 aaKnown RBP0.94□□□□□ -2.26
HMGB1P36-201ENST00000487709 MYH7P12883 1935 aa0.93□□□□□ -2.26
HMGB1P36-201ENST00000487709 PXDNQ92626 1479 aa0.93□□□□□ -2.26
HMGB1P36-201ENST00000487709 LOC285095A0A1B0GVY8 99 aa0.93□□□□□ -2.26
HMGB1P36-201ENST00000487709 PVALEFA0A1B0GWK0 134 aa0.93□□□□□ -2.26
HMGB1P36-201ENST00000487709 CRYM-AS1A6NIL9 109 aa0.93□□□□□ -2.26
HMGB1P36-201ENST00000487709 MT-ATP8P03928 68 aa0.93□□□□□ -2.26
HMGB1P36-201ENST00000487709 SEC11AP67812 179 aa0.93□□□□□ -2.26
HMGB1P36-201ENST00000487709 TSLPQ969D9 159 aa0.93□□□□□ -2.26
HMGB1P36-201ENST00000487709 MANBALQ9NQG1 85 aa0.93□□□□□ -2.26
HMGB1P36-201ENST00000487709 E9PCH4 1651 aa0.93□□□□□ -2.26
HMGB1P36-201ENST00000487709 RREB1Q92766 1687 aa0.93□□□□□ -2.26
HMGB1P36-201ENST00000487709 PTPRFP10586 1907 aa0.93□□□□□ -2.26
HMGB1P36-201ENST00000487709 MYH6P13533 1939 aa0.93□□□□□ -2.26
HMGB1P36-201ENST00000487709 ATG2AQ2TAZ0 1938 aa0.93□□□□□ -2.26
HMGB1P36-201ENST00000487709 AKAP11Q9UKA4 1901 aa0.93□□□□□ -2.26
HMGB1P36-201ENST00000487709 MYH13Q9UKX3 1938 aa0.93□□□□□ -2.26
HMGB1P36-201ENST00000487709 LRRC37A3O60309 1634 aa0.93□□□□□ -2.26
HMGB1P36-201ENST00000487709 GAPVD1Q14C86 1478 aa0.92□□□□□ -2.26
HMGB1P36-201ENST00000487709 SPHKAPQ2M3C7 1700 aa0.92□□□□□ -2.26
HMGB1P36-201ENST00000487709 PEAK1Q9H792 1746 aa0.92□□□□□ -2.26
HMGB1P36-201ENST00000487709 TTC37Q6PGP7 1564 aa0.92□□□□□ -2.26
HMGB1P36-201ENST00000487709 ABCC5O15440 1437 aa0.92□□□□□ -2.26
HMGB1P36-201ENST00000487709 TROQ12816 1431 aaPredicted RBP0.92□□□□□ -2.26
HMGB1P36-201ENST00000487709 A0A087WTM6 91 aa0.92□□□□□ -2.26
HMGB1P36-201ENST00000487709 hADV29S1A0JD25 119 aa0.92□□□□□ -2.26
HMGB1P36-201ENST00000487709 F2Z2F3 143 aa0.92□□□□□ -2.26
HMGB1P36-201ENST00000487709 CHKB-CPT1BH3BT56 60 aa0.92□□□□□ -2.26
HMGB1P36-201ENST00000487709 NDUFC1O43677 76 aa0.92□□□□□ -2.26
HMGB1P36-201ENST00000487709 COX6CP09669 75 aa0.92□□□□□ -2.26
HMGB1P36-201ENST00000487709 FXYD6P3P58550 94 aa0.92□□□□□ -2.26
HMGB1P36-201ENST00000487709 SPAG11BQ08648 103 aa0.92□□□□□ -2.26
HMGB1P36-201ENST00000487709 Q0VG73 95 aa0.92□□□□□ -2.26
HMGB1P36-201ENST00000487709 SPAG11AQ6PDA7 123 aa0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms