RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 PRADC1Q9BSG0 188 aa6.68□□□□□ -1.34
MCF2L-227ENST00000486806 MRPL18Q9H0U6 180 aaKnown RBP6.68□□□□□ -1.34
MCF2L-227ENST00000486806 TRBV6-5A0A0K0K1A5 114 aa6.67□□□□□ -1.34
MCF2L-227ENST00000486806 SMKR1H3BMG3 65 aa6.67□□□□□ -1.34
MCF2L-227ENST00000486806 PHOX2AO14813 284 aa6.67□□□□□ -1.34
MCF2L-227ENST00000486806 PPBPP02775 128 aa6.67□□□□□ -1.34
MCF2L-227ENST00000486806 ORMDL3Q8N138 153 aa6.67□□□□□ -1.34
MCF2L-227ENST00000486806 MUC7Q8TAX7 377 aa6.67□□□□□ -1.34
MCF2L-227ENST00000486806 RPL39LQ96EH5 51 aaKnown RBP6.67□□□□□ -1.34
MCF2L-227ENST00000486806 TRAPPC1Q9Y5R8 145 aa6.67□□□□□ -1.34
MCF2L-227ENST00000486806 A0A096LPF7 62 aa6.66□□□□□ -1.34
MCF2L-227ENST00000486806 GYPEP15421 78 aa6.66□□□□□ -1.34
MCF2L-227ENST00000486806 CKS2P33552 79 aa6.66□□□□□ -1.34
MCF2L-227ENST00000486806 UBE2D3P61077 147 aa6.66□□□□□ -1.34
MCF2L-227ENST00000486806 UBE2D2P62837 147 aa6.66□□□□□ -1.34
MCF2L-227ENST00000486806 DNAJC30Q96LL9 226 aa6.66□□□□□ -1.34
MCF2L-227ENST00000486806 NIT2Q9NQR4 276 aa6.66□□□□□ -1.34
MCF2L-227ENST00000486806 LAMTOR2Q9Y2Q5 125 aa6.66□□□□□ -1.34
MCF2L-227ENST00000486806 TGP01266 2768 aa6.66□□□□□ -1.34
MCF2L-227ENST00000486806 TRBV7-3A0A075B6L6 115 aa6.65□□□□□ -1.34
MCF2L-227ENST00000486806 GAGE12JA6NER3 117 aa6.65□□□□□ -1.34
MCF2L-227ENST00000486806 IGLL5B9A064 214 aa6.65□□□□□ -1.34
MCF2L-227ENST00000486806 NPYP01303 97 aa6.65□□□□□ -1.34
MCF2L-227ENST00000486806 RPL36AP83881 106 aaKnown RBP6.65□□□□□ -1.34
MCF2L-227ENST00000486806 FABP9Q0Z7S8 132 aa6.65□□□□□ -1.34
MCF2L-227ENST00000486806 GAGE1Q13065 139 aa6.65□□□□□ -1.34
MCF2L-227ENST00000486806 GAGE4Q13068 117 aa6.65□□□□□ -1.34
MCF2L-227ENST00000486806 GAGE5Q13069 117 aa6.65□□□□□ -1.34
MCF2L-227ENST00000486806 KIAA1644Q3SXP7 199 aa6.65□□□□□ -1.34
MCF2L-227ENST00000486806 GAGE13Q4V321 117 aa6.65□□□□□ -1.34
MCF2L-227ENST00000486806 OR10J3Q5JRS4 329 aa6.65□□□□□ -1.34
MCF2L-227ENST00000486806 C15orf53Q8NAA6 179 aa6.65□□□□□ -1.34
MCF2L-227ENST00000486806 RPL36ALQ969Q0 106 aaKnown RBP6.65□□□□□ -1.34
MCF2L-227ENST00000486806 PRELID3AQ96N28 172 aa6.65□□□□□ -1.34
MCF2L-227ENST00000486806 LYSTQ99698 3801 aa6.65□□□□□ -1.34
MCF2L-227ENST00000486806 ICOSQ9Y6W8 199 aa6.65□□□□□ -1.34
MCF2L-227ENST00000486806 TNFRSF6BO95407 300 aa6.64□□□□□ -1.35
MCF2L-227ENST00000486806 PPP1R17O96001 155 aa6.64□□□□□ -1.35
MCF2L-227ENST00000486806 TRGC2P03986 189 aa6.64□□□□□ -1.35
MCF2L-227ENST00000486806 SRIP30626 198 aa6.64□□□□□ -1.35
MCF2L-227ENST00000486806 SUMO2P61956 95 aaKnown RBP6.64□□□□□ -1.35
MCF2L-227ENST00000486806 RPL32P62910 135 aaKnown RBP6.64□□□□□ -1.35
MCF2L-227ENST00000486806 MRPL23Q16540 153 aaKnown RBP6.64□□□□□ -1.35
MCF2L-227ENST00000486806 ZFAND6Q6FIF0 208 aa6.64□□□□□ -1.35
MCF2L-227ENST00000486806 ZNRF2Q8NHG8 242 aa6.64□□□□□ -1.35
MCF2L-227ENST00000486806 C20orf78Q9BR46 151 aa6.64□□□□□ -1.35
MCF2L-227ENST00000486806 ALKBH7Q9BT30 221 aaPredicted RBP6.64□□□□□ -1.35
MCF2L-227ENST00000486806 KLK5Q9Y337 293 aaPredicted RBP6.64□□□□□ -1.35
MCF2L-227ENST00000486806 SDHAF1A6NFY7 115 aa6.63□□□□□ -1.35
MCF2L-227ENST00000486806 PRSS47A8MTI9 375 aa6.63□□□□□ -1.35
MCF2L-227ENST00000486806 POLR2KP53803 58 aaKnown RBP6.63□□□□□ -1.35
MCF2L-227ENST00000486806 TCTAP57738 103 aa6.63□□□□□ -1.35
MCF2L-227ENST00000486806 TMEM70Q9BUB7 260 aa6.63□□□□□ -1.35
MCF2L-227ENST00000486806 ST20Q9HBF5 79 aa6.63□□□□□ -1.35
MCF2L-227ENST00000486806 APLNQ9ULZ1 77 aa6.63□□□□□ -1.35
MCF2L-227ENST00000486806 TNFRSF18Q9Y5U5 241 aa6.63□□□□□ -1.35
MCF2L-227ENST00000486806 TRBV27A0A0K0K1C4 114 aa6.62□□□□□ -1.35
MCF2L-227ENST00000486806 C3orf84H3BNL1 204 aa6.62□□□□□ -1.35
MCF2L-227ENST00000486806 NUDT3O95989 172 aa6.62□□□□□ -1.35
MCF2L-227ENST00000486806 CASC10Q5T4H9 136 aa6.62□□□□□ -1.35
MCF2L-227ENST00000486806 NEGR1Q7Z3B1 354 aa6.62□□□□□ -1.35
MCF2L-227ENST00000486806 SH2D6Q7Z4S9 175 aa6.62□□□□□ -1.35
MCF2L-227ENST00000486806 DAZ4Q86SG3 579 aaKnown RBP6.62□□□□□ -1.35
MCF2L-227ENST00000486806 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.62□□□□□ -1.35
MCF2L-227ENST00000486806 ATP6V0E2Q8NHE4 81 aa6.62□□□□□ -1.35
MCF2L-227ENST00000486806 SMIM2Q9BVW6 85 aa6.62□□□□□ -1.35
MCF2L-227ENST00000486806 DAZ3Q9NR90 486 aaKnown RBP6.62□□□□□ -1.35
MCF2L-227ENST00000486806 DNAH1Q9P2D7 4330 aa6.62□□□□□ -1.35
MCF2L-227ENST00000486806 IGLV2-18A0A075B6J9 118 aa6.61□□□□□ -1.35
MCF2L-227ENST00000486806 IGHV3-38A0A0C4DH36 116 aa6.61□□□□□ -1.35
MCF2L-227ENST00000486806 TIRAPP58753 221 aa6.61□□□□□ -1.35
MCF2L-227ENST00000486806 C18orf32Q8TCD1 76 aa6.61□□□□□ -1.35
MCF2L-227ENST00000486806 GTSF1LQ9H1H1 148 aa6.61□□□□□ -1.35
MCF2L-227ENST00000486806 MAP1LC3AQ9H492 121 aa6.61□□□□□ -1.35
MCF2L-227ENST00000486806 VPS13DQ5THJ4 4388 aa6.61□□□□□ -1.35
MCF2L-227ENST00000486806 ALMS1Q8TCU4 4167 aa6.61□□□□□ -1.35
MCF2L-227ENST00000486806 I3L3M4 83 aa6.6□□□□□ -1.35
MCF2L-227ENST00000486806 TSHBP01222 138 aa6.6□□□□□ -1.35
MCF2L-227ENST00000486806 LINC01546A6NGU7 62 aa6.59□□□□□ -1.35
MCF2L-227ENST00000486806 VCYO14598 125 aa6.59□□□□□ -1.35
MCF2L-227ENST00000486806 IQCJQ1A5X6 159 aa6.59□□□□□ -1.35
MCF2L-227ENST00000486806 ESRGQ1W209 222 aa6.59□□□□□ -1.35
MCF2L-227ENST00000486806 LYPD5Q6UWN5 251 aa6.59□□□□□ -1.35
MCF2L-227ENST00000486806 NTM-AS1Q6ZSK4 140 aa6.59□□□□□ -1.35
MCF2L-227ENST00000486806 Q8N8P6 123 aa6.59□□□□□ -1.35
MCF2L-227ENST00000486806 TRBV6-8A0A0A6YYG3 113 aa6.58□□□□□ -1.36
MCF2L-227ENST00000486806 LOC389332A0A1B0GUA5 103 aa6.58□□□□□ -1.36
MCF2L-227ENST00000486806 HIST1H2BKO60814 126 aa6.58□□□□□ -1.36
MCF2L-227ENST00000486806 HIST1H2BJP06899 126 aa6.58□□□□□ -1.36
MCF2L-227ENST00000486806 PMCHP20382 165 aa6.58□□□□□ -1.36
MCF2L-227ENST00000486806 HIST1H2BOP23527 126 aa6.58□□□□□ -1.36
MCF2L-227ENST00000486806 HIST1H2BBP33778 126 aa6.58□□□□□ -1.36
MCF2L-227ENST00000486806 IFI27P40305 119 aaPredicted RBP6.58□□□□□ -1.36
MCF2L-227ENST00000486806 HIST1H2BDP58876 126 aa6.58□□□□□ -1.36
MCF2L-227ENST00000486806 HIST1H2BCP62807 126 aa6.58□□□□□ -1.36
MCF2L-227ENST00000486806 COTL1Q14019 142 aa6.58□□□□□ -1.36
MCF2L-227ENST00000486806 HIST2H2BEQ16778 126 aa6.58□□□□□ -1.36
MCF2L-227ENST00000486806 TMEM97Q5BJF2 176 aa6.58□□□□□ -1.36
MCF2L-227ENST00000486806 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.58□□□□□ -1.36
MCF2L-227ENST00000486806 LELP1Q5T871 98 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms