RNA–Protein interactions for RNA: ENST00000486235.5

TMEM39A-209, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-209ENST00000486235 ZNF114Q8NC26 417 aa4.54□□□□□ -1.68
TMEM39A-209ENST00000486235 C1QTNF4Q9BXJ3 329 aa4.54□□□□□ -1.68
TMEM39A-209ENST00000486235 MRPL36Q9P0J6 103 aaKnown RBP4.54□□□□□ -1.68
TMEM39A-209ENST00000486235 TP53TG3Q9ULZ0 132 aa4.54□□□□□ -1.68
TMEM39A-209ENST00000486235 H3BMM0 161 aa4.53□□□□□ -1.68
TMEM39A-209ENST00000486235 K7ERU9 68 aa4.53□□□□□ -1.68
TMEM39A-209ENST00000486235 GAGE7O76087 117 aa4.53□□□□□ -1.68
TMEM39A-209ENST00000486235 GAGE12FP0CL80 117 aa4.53□□□□□ -1.68
TMEM39A-209ENST00000486235 GAGE12GP0CL81 117 aa4.53□□□□□ -1.68
TMEM39A-209ENST00000486235 GAGE12IP0CL82 117 aa4.53□□□□□ -1.68
TMEM39A-209ENST00000486235 CRYBB3P26998 211 aa4.53□□□□□ -1.68
TMEM39A-209ENST00000486235 DEFB1P60022 68 aa4.53□□□□□ -1.68
TMEM39A-209ENST00000486235 UBE2G1P62253 170 aa4.53□□□□□ -1.68
TMEM39A-209ENST00000486235 GAGE4Q13068 117 aa4.53□□□□□ -1.68
TMEM39A-209ENST00000486235 SPATA12Q7Z6I5 190 aa4.53□□□□□ -1.68
TMEM39A-209ENST00000486235 S100A7AQ86SG5 101 aa4.53□□□□□ -1.68
TMEM39A-209ENST00000486235 OR8I2Q8N0Y5 310 aa4.53□□□□□ -1.68
TMEM39A-209ENST00000486235 C6orf223Q8N319 242 aa4.53□□□□□ -1.68
TMEM39A-209ENST00000486235 OR4C5Q8NGB2 326 aa4.53□□□□□ -1.68
TMEM39A-209ENST00000486235 TSKUQ8WUA8 353 aa4.53□□□□□ -1.68
TMEM39A-209ENST00000486235 TMEM70Q9BUB7 260 aa4.53□□□□□ -1.68
TMEM39A-209ENST00000486235 DERL1Q9BUN8 251 aa4.53□□□□□ -1.68
TMEM39A-209ENST00000486235 TMEM191AQ9H0A3 160 aa4.53□□□□□ -1.68
TMEM39A-209ENST00000486235 HSPB8Q9UJY1 196 aa4.53□□□□□ -1.68
TMEM39A-209ENST00000486235 RNF24Q9Y225 148 aa4.53□□□□□ -1.68
TMEM39A-209ENST00000486235 CHTOPQ9Y3Y2 248 aaKnown RBP4.53□□□□□ -1.68
TMEM39A-209ENST00000486235 YTHDF2Q9Y5A9 579 aaKnown RBP4.53□□□□□ -1.68
TMEM39A-209ENST00000486235 TRBV6-1A0A0K0K1D8 114 aa4.52□□□□□ -1.69
TMEM39A-209ENST00000486235 NBDYA0A0U1RRE5 68 aa4.52□□□□□ -1.69
TMEM39A-209ENST00000486235 GRIFINA4D1Z8 144 aa4.52□□□□□ -1.69
TMEM39A-209ENST00000486235 TMEM189A5PLL7 270 aa4.52□□□□□ -1.69
TMEM39A-209ENST00000486235 A8MWL6 223 aa4.52□□□□□ -1.69
TMEM39A-209ENST00000486235 K7EN84 100 aa4.52□□□□□ -1.69
TMEM39A-209ENST00000486235 C3orf79P0CE67 100 aa4.52□□□□□ -1.69
TMEM39A-209ENST00000486235 SRIP30626 198 aa4.52□□□□□ -1.69
TMEM39A-209ENST00000486235 SEC11AP67812 179 aa4.52□□□□□ -1.69
TMEM39A-209ENST00000486235 GDF5OSQ5U4N7 250 aa4.52□□□□□ -1.69
TMEM39A-209ENST00000486235 MIC13Q5XKP0 118 aa4.52□□□□□ -1.69
TMEM39A-209ENST00000486235 Q6AWC8 147 aa4.52□□□□□ -1.69
TMEM39A-209ENST00000486235 Q8N976 141 aa4.52□□□□□ -1.69
TMEM39A-209ENST00000486235 IGF2BP2-AS1Q96M15 143 aa4.52□□□□□ -1.69
TMEM39A-209ENST00000486235 FNDC4Q9H6D8 234 aaPredicted RBP4.52□□□□□ -1.69
TMEM39A-209ENST00000486235 ZNF492Q9P255 531 aa4.52□□□□□ -1.69
TMEM39A-209ENST00000486235 IGLV5-39A0A0G2JS06 123 aa4.51□□□□□ -1.69
TMEM39A-209ENST00000486235 TEX48A0A1B0GUV7 120 aa4.51□□□□□ -1.69
TMEM39A-209ENST00000486235 SMIM9A6NGZ8 99 aa4.51□□□□□ -1.69
TMEM39A-209ENST00000486235 M0R2Z0 102 aa4.51□□□□□ -1.69
TMEM39A-209ENST00000486235 NUPR1O60356 82 aa4.51□□□□□ -1.69
TMEM39A-209ENST00000486235 OR7C2O60412 319 aa4.51□□□□□ -1.69
TMEM39A-209ENST00000486235 IGKV1-17P01599 117 aa4.51□□□□□ -1.69
TMEM39A-209ENST00000486235 RNASE2P10153 161 aaKnown RBP4.51□□□□□ -1.69
TMEM39A-209ENST00000486235 HLA-DRB4P13762 266 aa4.51□□□□□ -1.69
TMEM39A-209ENST00000486235 DAD1P61803 113 aa4.51□□□□□ -1.69
TMEM39A-209ENST00000486235 SNRPD3P62318 126 aaKnown RBP4.51□□□□□ -1.69
TMEM39A-209ENST00000486235 HBBP68871 147 aa4.51□□□□□ -1.69
TMEM39A-209ENST00000486235 HIST1H1AQ02539 215 aaPredicted RBP4.51□□□□□ -1.69
TMEM39A-209ENST00000486235 BATFQ16520 125 aa4.51□□□□□ -1.69
TMEM39A-209ENST00000486235 SLC25A34Q6PIV7 304 aa4.51□□□□□ -1.69
TMEM39A-209ENST00000486235 NIT1Q86X76 327 aa4.51□□□□□ -1.69
TMEM39A-209ENST00000486235 C18orf32Q8TCD1 76 aa4.51□□□□□ -1.69
TMEM39A-209ENST00000486235 MRPL53Q96EL3 112 aaKnown RBP4.51□□□□□ -1.69
TMEM39A-209ENST00000486235 FMC1Q96HJ9 113 aa4.51□□□□□ -1.69
TMEM39A-209ENST00000486235 NDFIP1Q9BT67 221 aa4.51□□□□□ -1.69
TMEM39A-209ENST00000486235 KLF12Q9Y4X4 402 aa4.51□□□□□ -1.69
TMEM39A-209ENST00000486235 HLA-DRB4X5D2U9 266 aa4.51□□□□□ -1.69
TMEM39A-209ENST00000486235 A0A1B0GXF2 115 aa4.5□□□□□ -1.69
TMEM39A-209ENST00000486235 FBLL1A6NHQ2 334 aaKnown RBP4.5□□□□□ -1.69
TMEM39A-209ENST00000486235 EPM2AB3EWF7 344 aa4.5□□□□□ -1.69
TMEM39A-209ENST00000486235 CORTO00230 105 aa4.5□□□□□ -1.69
TMEM39A-209ENST00000486235 SLC17A3O00476 420 aa4.5□□□□□ -1.69
TMEM39A-209ENST00000486235 PEX7O00628 323 aa4.5□□□□□ -1.69
TMEM39A-209ENST00000486235 INAFM2P0DMQ5 153 aa4.5□□□□□ -1.69
TMEM39A-209ENST00000486235 RBX1P62877 108 aa4.5□□□□□ -1.69
TMEM39A-209ENST00000486235 UBE2L3P68036 154 aaKnown RBP4.5□□□□□ -1.69
TMEM39A-209ENST00000486235 GTF2H5Q6ZYL4 71 aa4.5□□□□□ -1.69
TMEM39A-209ENST00000486235 STPG4Q8N801 248 aa4.5□□□□□ -1.69
TMEM39A-209ENST00000486235 ZNRF2Q8NHG8 242 aa4.5□□□□□ -1.69
TMEM39A-209ENST00000486235 ZNF479Q96JC4 524 aa4.5□□□□□ -1.69
TMEM39A-209ENST00000486235 MAP1LC3CQ9BXW4 147 aa4.5□□□□□ -1.69
TMEM39A-209ENST00000486235 FAT1Q14517 4588 aa4.5□□□□□ -1.69
TMEM39A-209ENST00000486235 FLG2Q5D862 2391 aaPredicted RBP4.49□□□□□ -1.69
TMEM39A-209ENST00000486235 SERTM2A0A1B0GWG4 89 aa4.49□□□□□ -1.69
TMEM39A-209ENST00000486235 A6NDN8 102 aa4.49□□□□□ -1.69
TMEM39A-209ENST00000486235 GGTLC3B5MD39 225 aa4.49□□□□□ -1.69
TMEM39A-209ENST00000486235 SIVA1O15304 175 aa4.49□□□□□ -1.69
TMEM39A-209ENST00000486235 COX7A2P2O60397 106 aa4.49□□□□□ -1.69
TMEM39A-209ENST00000486235 IGLV2-8P01709 118 aa4.49□□□□□ -1.69
TMEM39A-209ENST00000486235 IL4P05112 153 aa4.49□□□□□ -1.69
TMEM39A-209ENST00000486235 IGLC1P0CG04 106 aa4.49□□□□□ -1.69
TMEM39A-209ENST00000486235 CSN1S1P47710 185 aa4.49□□□□□ -1.69
TMEM39A-209ENST00000486235 RRN3P1Q2M238 152 aa4.49□□□□□ -1.69
TMEM39A-209ENST00000486235 GCSAMLQ5JQS6 135 aa4.49□□□□□ -1.69
TMEM39A-209ENST00000486235 COX8CQ7Z4L0 72 aa4.49□□□□□ -1.69
TMEM39A-209ENST00000486235 C1orf158Q8N1D5 194 aa4.49□□□□□ -1.69
TMEM39A-209ENST00000486235 C15orf53Q8NAA6 179 aa4.49□□□□□ -1.69
TMEM39A-209ENST00000486235 GATD1Q8NB37 220 aa4.49□□□□□ -1.69
TMEM39A-209ENST00000486235 MPLKIPQ8TAP9 179 aa4.49□□□□□ -1.69
TMEM39A-209ENST00000486235 GPR82Q96P67 336 aa4.49□□□□□ -1.69
TMEM39A-209ENST00000486235 RPP21Q9H633 154 aaKnown RBP4.49□□□□□ -1.69
TMEM39A-209ENST00000486235 F5H768 121 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms