RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 METTL15P1P0C7V9 234 aa1.97□□□□□ -2.09
SMC6-208ENST00000481708 PIRTP0C851 137 aa1.97□□□□□ -2.09
SMC6-208ENST00000481708 DNAH10OSP0CZ25 163 aa1.97□□□□□ -2.09
SMC6-208ENST00000481708 LGALS3P17931 250 aaKnown RBP1.97□□□□□ -2.09
SMC6-208ENST00000481708 RPL27AP46776 148 aaKnown RBP1.97□□□□□ -2.09
SMC6-208ENST00000481708 COMMD6Q7Z4G1 85 aa1.97□□□□□ -2.09
SMC6-208ENST00000481708 PFN4Q8NHR9 129 aa1.97□□□□□ -2.09
SMC6-208ENST00000481708 RMI2Q96E14 147 aa1.97□□□□□ -2.09
SMC6-208ENST00000481708 TMEM70Q9BUB7 260 aa1.97□□□□□ -2.09
SMC6-208ENST00000481708 GGTLC3B5MD39 225 aa1.96□□□□□ -2.09
SMC6-208ENST00000481708 CD2P06729 351 aa1.96□□□□□ -2.09
SMC6-208ENST00000481708 PTHLHP12272 177 aa1.96□□□□□ -2.09
SMC6-208ENST00000481708 GNGT1P63211 74 aa1.96□□□□□ -2.09
SMC6-208ENST00000481708 MSRB3Q8IXL7 192 aa1.96□□□□□ -2.09
SMC6-208ENST00000481708 TMEM203Q969S6 136 aa1.96□□□□□ -2.09
SMC6-208ENST00000481708 DPH3Q96FX2 82 aa1.96□□□□□ -2.09
SMC6-208ENST00000481708 RPS10P5Q9NQ39 176 aa1.96□□□□□ -2.09
SMC6-208ENST00000481708 SAR1AQ9NR31 198 aa1.96□□□□□ -2.09
SMC6-208ENST00000481708 CKLFQ9UBR5 152 aa1.96□□□□□ -2.09
SMC6-208ENST00000481708 K7ERS5 55 aa1.96□□□□□ -2.1
SMC6-208ENST00000481708 CPSF4O95639 269 aaKnown RBP1.96□□□□□ -2.1
SMC6-208ENST00000481708 GPX1P07203 203 aa1.96□□□□□ -2.1
SMC6-208ENST00000481708 CAV3P56539 151 aa1.96□□□□□ -2.1
SMC6-208ENST00000481708 DSCR10P59022 87 aa1.96□□□□□ -2.1
SMC6-208ENST00000481708 COPZ1P61923 177 aa1.96□□□□□ -2.1
SMC6-208ENST00000481708 SS18Q15532 418 aa1.96□□□□□ -2.1
SMC6-208ENST00000481708 MED12Q93074 2177 aa1.96□□□□□ -2.1
SMC6-208ENST00000481708 A8MTW9 85 aa1.96□□□□□ -2.1
SMC6-208ENST00000481708 ZNF737O75373 536 aa1.96□□□□□ -2.1
SMC6-208ENST00000481708 IGLV1-51P01701 117 aa1.96□□□□□ -2.1
SMC6-208ENST00000481708 SNRPD3P62318 126 aaKnown RBP1.96□□□□□ -2.1
SMC6-208ENST00000481708 UBE2BP63146 152 aa1.96□□□□□ -2.1
SMC6-208ENST00000481708 DIRC1Q969H9 104 aa1.96□□□□□ -2.1
SMC6-208ENST00000481708 TENM3Q9P273 2699 aa1.96□□□□□ -2.1
SMC6-208ENST00000481708 TRAV13-1A0A0B4J241 112 aa1.95□□□□□ -2.1
SMC6-208ENST00000481708 FAM25AB3EWG3 89 aa1.95□□□□□ -2.1
SMC6-208ENST00000481708 FAM25CB3EWG5 89 aa1.95□□□□□ -2.1
SMC6-208ENST00000481708 FAM25GB3EWG6 89 aa1.95□□□□□ -2.1
SMC6-208ENST00000481708 CST7O76096 145 aa1.95□□□□□ -2.1
SMC6-208ENST00000481708 UBL3O95164 117 aa1.95□□□□□ -2.1
SMC6-208ENST00000481708 CD14P08571 375 aa1.95□□□□□ -2.1
SMC6-208ENST00000481708 PLGLB1Q02325 96 aa1.95□□□□□ -2.1
SMC6-208ENST00000481708 DEFB134Q4QY38 66 aa1.95□□□□□ -2.1
SMC6-208ENST00000481708 OR10P1Q8NGE3 313 aa1.95□□□□□ -2.1
SMC6-208ENST00000481708 IMMP2LQ96T52 175 aa1.95□□□□□ -2.1
SMC6-208ENST00000481708 NPCDR1Q9BY65 106 aa1.95□□□□□ -2.1
SMC6-208ENST00000481708 A8MWP6 167 aa1.95□□□□□ -2.1
SMC6-208ENST00000481708 ZNF705AQ6ZN79 300 aaPredicted RBP1.95□□□□□ -2.1
SMC6-208ENST00000481708 TMEM91Q6ZNR0 172 aa1.95□□□□□ -2.1
SMC6-208ENST00000481708 C4orf33Q8N1A6 199 aa1.95□□□□□ -2.1
SMC6-208ENST00000481708 BPESC1Q9GZL8 116 aa1.95□□□□□ -2.1
SMC6-208ENST00000481708 COMMD3Q9UBI1 195 aa1.95□□□□□ -2.1
SMC6-208ENST00000481708 LSM2Q9Y333 95 aaKnown RBP1.95□□□□□ -2.1
SMC6-208ENST00000481708 HMGN4O00479 90 aa1.95□□□□□ -2.1
SMC6-208ENST00000481708 XCL1P47992 114 aa1.95□□□□□ -2.1
SMC6-208ENST00000481708 TRAV27A0A087WT01 109 aa1.94□□□□□ -2.1
SMC6-208ENST00000481708 IGHV3-73A0A0B4J1V6 119 aa1.94□□□□□ -2.1
SMC6-208ENST00000481708 C20orf202A1L168 122 aa1.94□□□□□ -2.1
SMC6-208ENST00000481708 GAS8-AS1O95177 125 aa1.94□□□□□ -2.1
SMC6-208ENST00000481708 MEIG1Q5JSS6 88 aa1.94□□□□□ -2.1
SMC6-208ENST00000481708 FAM27BQ5VT28 67 aa1.94□□□□□ -2.1
SMC6-208ENST00000481708 MIR17HGQ75NE6 70 aa1.94□□□□□ -2.1
SMC6-208ENST00000481708 ST20-AS1Q8NBB2 130 aa1.94□□□□□ -2.1
SMC6-208ENST00000481708 AQP3Q92482 292 aa1.94□□□□□ -2.1
SMC6-208ENST00000481708 OSTCQ9NRP0 149 aa1.94□□□□□ -2.1
SMC6-208ENST00000481708 ZFP30Q9Y2G7 519 aa1.94□□□□□ -2.1
SMC6-208ENST00000481708 UBR4Q5T4S7 5183 aa1.94□□□□□ -2.1
SMC6-208ENST00000481708 MPC2O95563 127 aa1.94□□□□□ -2.1
SMC6-208ENST00000481708 COL8A2P25067 703 aa1.94□□□□□ -2.1
SMC6-208ENST00000481708 NDUFA6P56556 154 aa1.94□□□□□ -2.1
SMC6-208ENST00000481708 HES1Q14469 280 aa1.94□□□□□ -2.1
SMC6-208ENST00000481708 BCL2L15Q5TBC7 163 aa1.94□□□□□ -2.1
SMC6-208ENST00000481708 HIST3H2BBQ8N257 126 aa1.94□□□□□ -2.1
SMC6-208ENST00000481708 SIGLECL1Q8N7X8 197 aa1.94□□□□□ -2.1
SMC6-208ENST00000481708 KLF14Q8TD94 323 aaPredicted RBP1.94□□□□□ -2.1
SMC6-208ENST00000481708 SNHG12Q9BXW3 62 aa1.94□□□□□ -2.1
SMC6-208ENST00000481708 BANF2Q9H503 90 aa1.94□□□□□ -2.1
SMC6-208ENST00000481708 KIF25-AS1Q9Y6Z4 181 aa1.94□□□□□ -2.1
SMC6-208ENST00000481708 FGF7P21781 194 aa1.94□□□□□ -2.1
SMC6-208ENST00000481708 ATP6V0CP27449 155 aa1.94□□□□□ -2.1
SMC6-208ENST00000481708 NUDT2P50583 147 aa1.94□□□□□ -2.1
SMC6-208ENST00000481708 QRFPP83859 136 aa1.94□□□□□ -2.1
SMC6-208ENST00000481708 ZNF816Q0VGE8 651 aaPredicted RBP1.94□□□□□ -2.1
SMC6-208ENST00000481708 PP6455Q8WZ26 134 aa1.94□□□□□ -2.1
SMC6-208ENST00000481708 OR4C12Q96R67 309 aa1.94□□□□□ -2.1
SMC6-208ENST00000481708 NABP2Q9BQ15 211 aa1.94□□□□□ -2.1
SMC6-208ENST00000481708 TRBV27A0A0K0K1C4 114 aa1.93□□□□□ -2.1
SMC6-208ENST00000481708 BBIP1A8MTZ0 92 aa1.93□□□□□ -2.1
SMC6-208ENST00000481708 CCL22O00626 93 aa1.93□□□□□ -2.1
SMC6-208ENST00000481708 CTSDP07339 412 aaPredicted RBP1.93□□□□□ -2.1
SMC6-208ENST00000481708 FXYD6P3P58550 94 aa1.93□□□□□ -2.1
SMC6-208ENST00000481708 HIST1H4AP62805 103 aaKnown RBP1.93□□□□□ -2.1
SMC6-208ENST00000481708 EIF5AP63241 154 aaKnown RBP1.93□□□□□ -2.1
SMC6-208ENST00000481708 MIAQ16674 131 aa1.93□□□□□ -2.1
SMC6-208ENST00000481708 NOXRED1Q6NXP6 359 aa1.93□□□□□ -2.1
SMC6-208ENST00000481708 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.93□□□□□ -2.1
SMC6-208ENST00000481708 UBALD1Q8TB05 177 aa1.93□□□□□ -2.1
SMC6-208ENST00000481708 LSM10Q969L4 123 aaKnown RBP1.93□□□□□ -2.1
SMC6-208ENST00000481708 TCEAL7Q9BRU2 100 aa1.93□□□□□ -2.1
SMC6-208ENST00000481708 MUC4Q99102 2169 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 232.9 ms