RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 PFDN1O60925 122 aa12.25□□□□□ -0.45
ABCF3-214ENST00000480562 ANGP03950 147 aaKnown RBP12.25□□□□□ -0.45
ABCF3-214ENST00000480562 KRTAP10-4P60372 401 aaPredicted RBP12.25□□□□□ -0.45
ABCF3-214ENST00000480562 SPANXN1Q5VSR9 72 aa12.25□□□□□ -0.45
ABCF3-214ENST00000480562 UMAD1C9J7I0 102 aa12.24□□□□□ -0.45
ABCF3-214ENST00000480562 OR5AL1P0C617 328 aa12.24□□□□□ -0.45
ABCF3-214ENST00000480562 ZNF345Q14585 488 aa12.24□□□□□ -0.45
ABCF3-214ENST00000480562 C14orf177Q52M58 125 aa12.24□□□□□ -0.45
ABCF3-214ENST00000480562 HLA-DQA1P01909 254 aa12.23□□□□□ -0.45
ABCF3-214ENST00000480562 NTM-AS1Q6ZSK4 140 aa12.23□□□□□ -0.45
ABCF3-214ENST00000480562 TMUB2Q71RG4 321 aa12.23□□□□□ -0.45
ABCF3-214ENST00000480562 USP17L23D6RBM5 183 aa12.22□□□□□ -0.45
ABCF3-214ENST00000480562 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.22□□□□□ -0.45
ABCF3-214ENST00000480562 KIF25-AS1Q9Y6Z4 181 aa12.22□□□□□ -0.45
ABCF3-214ENST00000480562 H2AFB1P0C5Y9 115 aa12.21□□□□□ -0.45
ABCF3-214ENST00000480562 GAGE6Q13070 117 aa12.21□□□□□ -0.45
ABCF3-214ENST00000480562 CLPSL2Q6UWE3 100 aa12.21□□□□□ -0.45
ABCF3-214ENST00000480562 BCL2L11O43521 198 aa12.2□□□□□ -0.46
ABCF3-214ENST00000480562 PRSS1P07477 247 aa12.2□□□□□ -0.46
ABCF3-214ENST00000480562 SMIM17P0DL12 118 aa12.2□□□□□ -0.46
ABCF3-214ENST00000480562 RPL35P42766 123 aaKnown RBP12.2□□□□□ -0.46
ABCF3-214ENST00000480562 PKIAP61925 76 aa12.2□□□□□ -0.46
ABCF3-214ENST00000480562 MIAQ16674 131 aa12.2□□□□□ -0.46
ABCF3-214ENST00000480562 DERL1Q9BUN8 251 aa12.2□□□□□ -0.46
ABCF3-214ENST00000480562 VAX2Q9UIW0 290 aa12.2□□□□□ -0.46
ABCF3-214ENST00000480562 A0A0D9SG52 128 aa12.19□□□□□ -0.46
ABCF3-214ENST00000480562 KANTRA0A1W2PQU2 76 aa12.19□□□□□ -0.46
ABCF3-214ENST00000480562 HMSDA8MTL9 139 aa12.19□□□□□ -0.46
ABCF3-214ENST00000480562 IGLV2-8P01709 118 aa12.19□□□□□ -0.46
ABCF3-214ENST00000480562 GZMBP10144 247 aa12.19□□□□□ -0.46
ABCF3-214ENST00000480562 RBX1P62877 108 aa12.19□□□□□ -0.46
ABCF3-214ENST00000480562 AP1S3Q96PC3 154 aa12.19□□□□□ -0.46
ABCF3-214ENST00000480562 CCL20P78556 96 aa12.18□□□□□ -0.46
ABCF3-214ENST00000480562 TMEM97Q5BJF2 176 aa12.18□□□□□ -0.46
ABCF3-214ENST00000480562 LINC00269Q8N2A0 174 aa12.18□□□□□ -0.46
ABCF3-214ENST00000480562 TPPP3Q9BW30 176 aa12.18□□□□□ -0.46
ABCF3-214ENST00000480562 MGPP08493 103 aa12.17□□□□□ -0.46
ABCF3-214ENST00000480562 KRTAP26-1Q6PEX3 210 aa12.17□□□□□ -0.46
ABCF3-214ENST00000480562 PRR34Q9NV39 138 aa12.17□□□□□ -0.46
ABCF3-214ENST00000480562 GNG13Q9P2W3 67 aa12.17□□□□□ -0.46
ABCF3-214ENST00000480562 TRBV25-1A0A075B6N4 114 aa12.16□□□□□ -0.46
ABCF3-214ENST00000480562 HMCN2Q8NDA2 5059 aa12.16□□□□□ -0.46
ABCF3-214ENST00000480562 M0QY20 66 aa12.15□□□□□ -0.46
ABCF3-214ENST00000480562 CENPWQ5EE01 88 aa12.15□□□□□ -0.46
ABCF3-214ENST00000480562 FER1L6-AS1Q8NA97 138 aa12.15□□□□□ -0.46
ABCF3-214ENST00000480562 OR2D3Q8NGH3 330 aa12.15□□□□□ -0.46
ABCF3-214ENST00000480562 C11orf52Q96A22 123 aa12.15□□□□□ -0.46
ABCF3-214ENST00000480562 MANBALQ9NQG1 85 aa12.15□□□□□ -0.46
ABCF3-214ENST00000480562 IGHV1-24A0A0C4DH33 117 aa12.14□□□□□ -0.47
ABCF3-214ENST00000480562 IGLC6P0CF74 106 aa12.14□□□□□ -0.47
ABCF3-214ENST00000480562 RPL37AP61513 92 aaKnown RBP12.14□□□□□ -0.47
ABCF3-214ENST00000480562 EIF5AP63241 154 aaKnown RBP12.14□□□□□ -0.47
ABCF3-214ENST00000480562 IQCJQ1A5X6 159 aa12.14□□□□□ -0.47
ABCF3-214ENST00000480562 SUMO4Q6EEV6 95 aa12.14□□□□□ -0.47
ABCF3-214ENST00000480562 IGLV10-54A0A075B6I4 117 aa12.13□□□□□ -0.47
ABCF3-214ENST00000480562 RAB19A4D1S5 217 aa12.13□□□□□ -0.47
ABCF3-214ENST00000480562 DGAT2L7PQ6IED9 249 aa12.13□□□□□ -0.47
ABCF3-214ENST00000480562 C9orf163Q8N9P6 203 aa12.13□□□□□ -0.47
ABCF3-214ENST00000480562 DAZAP1Q96EP5 407 aaKnown RBP12.13□□□□□ -0.47
ABCF3-214ENST00000480562 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.13□□□□□ -0.47
ABCF3-214ENST00000480562 OXTP01178 125 aa12.12□□□□□ -0.47
ABCF3-214ENST00000480562 NKX2-5P52952 324 aaPredicted RBP12.12□□□□□ -0.47
ABCF3-214ENST00000480562 RPS20P60866 119 aaKnown RBP12.12□□□□□ -0.47
ABCF3-214ENST00000480562 C19orf71A6NCJ1 209 aa12.11□□□□□ -0.47
ABCF3-214ENST00000480562 H7C1H1 209 aa12.11□□□□□ -0.47
ABCF3-214ENST00000480562 PANO1I0J062 215 aa12.11□□□□□ -0.47
ABCF3-214ENST00000480562 HNRNPA3P51991 378 aaKnown RBP12.11□□□□□ -0.47
ABCF3-214ENST00000480562 CACNG7P62955 275 aa12.11□□□□□ -0.47
ABCF3-214ENST00000480562 REG3AQ06141 175 aa12.11□□□□□ -0.47
ABCF3-214ENST00000480562 TRAV1-1A0A0B4J248 108 aa12.1□□□□□ -0.47
ABCF3-214ENST00000480562 C20orf203Q8NBC4 194 aa12.1□□□□□ -0.47
ABCF3-214ENST00000480562 GNG4P50150 75 aa12.09□□□□□ -0.47
ABCF3-214ENST00000480562 SDIM1Q6ZPB5 146 aa12.09□□□□□ -0.47
ABCF3-214ENST00000480562 TMEM243Q9BU79 118 aa12.09□□□□□ -0.47
ABCF3-214ENST00000480562 GFRA4Q9GZZ7 299 aa12.09□□□□□ -0.47
ABCF3-214ENST00000480562 IGLV4-60A0A075B6I1 120 aa12.08□□□□□ -0.48
ABCF3-214ENST00000480562 P01737 135 aa12.08□□□□□ -0.48
ABCF3-214ENST00000480562 RAB5CP51148 216 aa12.08□□□□□ -0.48
ABCF3-214ENST00000480562 SERTAD4-AS1Q5TG53 156 aa12.08□□□□□ -0.48
ABCF3-214ENST00000480562 RASL11AQ6T310 242 aa12.08□□□□□ -0.48
ABCF3-214ENST00000480562 LYZL1Q6UWQ5 148 aa12.08□□□□□ -0.48
ABCF3-214ENST00000480562 IFNA1P01562 189 aa12.07□□□□□ -0.48
ABCF3-214ENST00000480562 CLRN3Q8NCR9 226 aa12.07□□□□□ -0.48
ABCF3-214ENST00000480562 TRBV20OR9-2A0A075B6H5 130 aa12.06□□□□□ -0.48
ABCF3-214ENST00000480562 hDV102S1A0JD36 115 aa12.06□□□□□ -0.48
ABCF3-214ENST00000480562 XKRY2A2RUG3 117 aa12.06□□□□□ -0.48
ABCF3-214ENST00000480562 F2Z2F3 143 aa12.06□□□□□ -0.48
ABCF3-214ENST00000480562 TRGC1P0CF51 173 aa12.06□□□□□ -0.48
ABCF3-214ENST00000480562 NTF3P20783 257 aa12.06□□□□□ -0.48
ABCF3-214ENST00000480562 MEF2BQ02080 365 aaPredicted RBP12.06□□□□□ -0.48
ABCF3-214ENST00000480562 NIT2Q9NQR4 276 aa12.06□□□□□ -0.48
ABCF3-214ENST00000480562 MED9Q9NWA0 146 aa12.06□□□□□ -0.48
ABCF3-214ENST00000480562 TRAV8-4A0A0B4J246 113 aa12.05□□□□□ -0.48
ABCF3-214ENST00000480562 A0A1B0GUV1 79 aa12.05□□□□□ -0.48
ABCF3-214ENST00000480562 TEX46H3BTG2 121 aa12.05□□□□□ -0.48
ABCF3-214ENST00000480562 SMIM12Q96EX1 92 aa12.05□□□□□ -0.48
ABCF3-214ENST00000480562 DPH3P1Q9H4G8 78 aa12.05□□□□□ -0.48
ABCF3-214ENST00000480562 PDE6DO43924 150 aa12.04□□□□□ -0.48
ABCF3-214ENST00000480562 SULT1A2P50226 295 aa12.04□□□□□ -0.48
ABCF3-214ENST00000480562 CNBPP62633 177 aaKnown RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms