RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 S100A9P06702 114 aaKnown RBP8.57□□□□□ -1.04
VCL-205ENST00000478896 CXCL1P09341 107 aa8.57□□□□□ -1.04
VCL-205ENST00000478896 TRBV25-1A0A075B6N4 114 aa8.56□□□□□ -1.04
VCL-205ENST00000478896 SNAI2O43623 268 aa8.56□□□□□ -1.04
VCL-205ENST00000478896 PRSS1P07477 247 aa8.56□□□□□ -1.04
VCL-205ENST00000478896 GAGE6Q13070 117 aa8.56□□□□□ -1.04
VCL-205ENST00000478896 BAGE2Q86Y30 109 aa8.56□□□□□ -1.04
VCL-205ENST00000478896 AP1S3Q96PC3 154 aa8.56□□□□□ -1.04
VCL-205ENST00000478896 DERL1Q9BUN8 251 aa8.56□□□□□ -1.04
VCL-205ENST00000478896 CYTL1Q9NRR1 136 aa8.56□□□□□ -1.04
VCL-205ENST00000478896 MGPP08493 103 aa8.55□□□□□ -1.04
VCL-205ENST00000478896 OR5AL1P0C617 328 aa8.55□□□□□ -1.04
VCL-205ENST00000478896 RBX1P62877 108 aa8.55□□□□□ -1.04
VCL-205ENST00000478896 DGAT2L7PQ6IED9 249 aa8.55□□□□□ -1.04
VCL-205ENST00000478896 LINC00269Q8N2A0 174 aa8.55□□□□□ -1.04
VCL-205ENST00000478896 C9orf163Q8N9P6 203 aa8.55□□□□□ -1.04
VCL-205ENST00000478896 FAM213BQ8TBF2 198 aa8.55□□□□□ -1.04
VCL-205ENST00000478896 SFT2D1Q8WV19 159 aa8.55□□□□□ -1.04
VCL-205ENST00000478896 NTM-AS1Q6ZSK4 140 aa8.54□□□□□ -1.04
VCL-205ENST00000478896 TPPP3Q9BW30 176 aa8.54□□□□□ -1.04
VCL-205ENST00000478896 SSBP4Q9BWG4 385 aaPredicted RBP8.54□□□□□ -1.04
VCL-205ENST00000478896 PRR34Q9NV39 138 aa8.54□□□□□ -1.04
VCL-205ENST00000478896 VAX2Q9UIW0 290 aa8.54□□□□□ -1.04
VCL-205ENST00000478896 IGLV10-54A0A075B6I4 117 aa8.53□□□□□ -1.04
VCL-205ENST00000478896 IGHV1-24A0A0C4DH33 117 aa8.53□□□□□ -1.04
VCL-205ENST00000478896 G3V3Q6 166 aa8.53□□□□□ -1.04
VCL-205ENST00000478896 HNRNPA3P51991 378 aaKnown RBP8.53□□□□□ -1.04
VCL-205ENST00000478896 MLST8Q9BVC4 326 aa8.53□□□□□ -1.04
VCL-205ENST00000478896 BATF3Q9NR55 127 aa8.53□□□□□ -1.04
VCL-205ENST00000478896 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.53□□□□□ -1.04
VCL-205ENST00000478896 LRP1Q07954 4544 aaKnown RBP8.52□□□□□ -1.04
VCL-205ENST00000478896 REG3AQ06141 175 aa8.52□□□□□ -1.05
VCL-205ENST00000478896 KCNRGQ8N5I3 272 aa8.52□□□□□ -1.05
VCL-205ENST00000478896 CLRN3Q8NCR9 226 aa8.52□□□□□ -1.05
VCL-205ENST00000478896 DAZAP1Q96EP5 407 aaKnown RBP8.52□□□□□ -1.05
VCL-205ENST00000478896 A0A0D9SG52 128 aa8.51□□□□□ -1.05
VCL-205ENST00000478896 hDV102S1A0JD36 115 aa8.51□□□□□ -1.05
VCL-205ENST00000478896 UMAD1C9J7I0 102 aa8.51□□□□□ -1.05
VCL-205ENST00000478896 SMLR1H3BR10 107 aa8.51□□□□□ -1.05
VCL-205ENST00000478896 H7C1H1 209 aa8.51□□□□□ -1.05
VCL-205ENST00000478896 IQCJQ1A5X6 159 aa8.51□□□□□ -1.05
VCL-205ENST00000478896 MBD3L1Q8WWY6 194 aa8.51□□□□□ -1.05
VCL-205ENST00000478896 PANO1I0J062 215 aa8.5□□□□□ -1.05
VCL-205ENST00000478896 H2AFB1P0C5Y9 115 aa8.5□□□□□ -1.05
VCL-205ENST00000478896 RPL35P42766 123 aaKnown RBP8.5□□□□□ -1.05
VCL-205ENST00000478896 ZNF345Q14585 488 aa8.5□□□□□ -1.05
VCL-205ENST00000478896 TMUB2Q71RG4 321 aa8.5□□□□□ -1.05
VCL-205ENST00000478896 AP5S1Q9NUS5 200 aa8.5□□□□□ -1.05
VCL-205ENST00000478896 KIF25-AS1Q9Y6Z4 181 aa8.5□□□□□ -1.05
VCL-205ENST00000478896 FAT3Q8TDW7 4589 aa8.49□□□□□ -1.05
VCL-205ENST00000478896 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.49□□□□□ -1.05
VCL-205ENST00000478896 KANTRA0A1W2PQU2 76 aa8.49□□□□□ -1.05
VCL-205ENST00000478896 GZMBP10144 247 aa8.49□□□□□ -1.05
VCL-205ENST00000478896 SUMO4Q6EEV6 95 aa8.49□□□□□ -1.05
VCL-205ENST00000478896 KRTAP26-1Q6PEX3 210 aa8.49□□□□□ -1.05
VCL-205ENST00000478896 FER1L6-AS1Q8NA97 138 aa8.49□□□□□ -1.05
VCL-205ENST00000478896 DPH3Q96FX2 82 aa8.49□□□□□ -1.05
VCL-205ENST00000478896 HMCN2Q8NDA2 5059 aa8.48□□□□□ -1.05
VCL-205ENST00000478896 IGHV3-64A0A075B6Q5 118 aa8.48□□□□□ -1.05
VCL-205ENST00000478896 TRAV8-4A0A0B4J246 113 aa8.48□□□□□ -1.05
VCL-205ENST00000478896 M0QY20 66 aa8.48□□□□□ -1.05
VCL-205ENST00000478896 UBE2L6O14933 153 aa8.48□□□□□ -1.05
VCL-205ENST00000478896 P01737 135 aa8.48□□□□□ -1.05
VCL-205ENST00000478896 RAB5CP51148 216 aa8.48□□□□□ -1.05
VCL-205ENST00000478896 NKX2-5P52952 324 aaPredicted RBP8.48□□□□□ -1.05
VCL-205ENST00000478896 RPS20P60866 119 aaKnown RBP8.48□□□□□ -1.05
VCL-205ENST00000478896 RGS21Q2M5E4 152 aa8.48□□□□□ -1.05
VCL-205ENST00000478896 WDR73Q6P4I2 378 aa8.48□□□□□ -1.05
VCL-205ENST00000478896 SDIM1Q6ZPB5 146 aa8.48□□□□□ -1.05
VCL-205ENST00000478896 C20orf203Q8NBC4 194 aa8.48□□□□□ -1.05
VCL-205ENST00000478896 OR2D3Q8NGH3 330 aa8.48□□□□□ -1.05
VCL-205ENST00000478896 TMEM243Q9BU79 118 aa8.48□□□□□ -1.05
VCL-205ENST00000478896 PKHD1L1Q86WI1 4243 aa8.47□□□□□ -1.05
VCL-205ENST00000478896 CNBPP62633 177 aaKnown RBP8.47□□□□□ -1.05
VCL-205ENST00000478896 CACNG7P62955 275 aa8.47□□□□□ -1.05
VCL-205ENST00000478896 CENPWQ5EE01 88 aa8.47□□□□□ -1.05
VCL-205ENST00000478896 MANBALQ9NQG1 85 aa8.47□□□□□ -1.05
VCL-205ENST00000478896 GNG13Q9P2W3 67 aa8.47□□□□□ -1.05
VCL-205ENST00000478896 IGLV4-60A0A075B6I1 120 aa8.46□□□□□ -1.06
VCL-205ENST00000478896 XKRY2A2RUG3 117 aa8.46□□□□□ -1.06
VCL-205ENST00000478896 BCL2L11O43521 198 aa8.46□□□□□ -1.06
VCL-205ENST00000478896 TRGC1P0CF51 173 aa8.46□□□□□ -1.06
VCL-205ENST00000478896 IGLC6P0CF74 106 aa8.46□□□□□ -1.06
VCL-205ENST00000478896 SULT1A2P50226 295 aa8.46□□□□□ -1.06
VCL-205ENST00000478896 EIF5AP63241 154 aaKnown RBP8.46□□□□□ -1.06
VCL-205ENST00000478896 RASL11AQ6T310 242 aa8.46□□□□□ -1.06
VCL-205ENST00000478896 Q6ZRU5 148 aa8.46□□□□□ -1.06
VCL-205ENST00000478896 A0A1B0GUV1 79 aa8.45□□□□□ -1.06
VCL-205ENST00000478896 CHTF8P0CG12 524 aa8.45□□□□□ -1.06
VCL-205ENST00000478896 AMTP48728 403 aa8.45□□□□□ -1.06
VCL-205ENST00000478896 CIRBPQ14011 172 aaKnown RBP8.45□□□□□ -1.06
VCL-205ENST00000478896 C11orf52Q96A22 123 aa8.45□□□□□ -1.06
VCL-205ENST00000478896 GFRA4Q9GZZ7 299 aa8.45□□□□□ -1.06
VCL-205ENST00000478896 DPH3P1Q9H4G8 78 aa8.45□□□□□ -1.06
VCL-205ENST00000478896 A0A087WYN8 130 aa8.44□□□□□ -1.06
VCL-205ENST00000478896 IGKV3OR2-268A0A0C4DH90 116 aa8.44□□□□□ -1.06
VCL-205ENST00000478896 GNG4P50150 75 aa8.44□□□□□ -1.06
VCL-205ENST00000478896 COTL1Q14019 142 aa8.44□□□□□ -1.06
VCL-205ENST00000478896 PGLYRP4Q96LB8 373 aa8.44□□□□□ -1.06
VCL-205ENST00000478896 C19orf71A6NCJ1 209 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms